BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0449.0010.p (191 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_691632.1| 6-aminohexanoate-cyclic-dimer hydrolase [Oceano... 156 2e-37 gb|AAS70961.1| 6-aminohexanoate-cyclic-dimer hydrolase [Leptospi... 141 9e-33 ref|NP_711514.1| putative amidase [Leptospira interrogans serova... 141 1e-32 gb|EAK51286.1| unknown [environmental sequence] 123 2e-27 ref|ZP_00069779.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransfe... 120 1e-26 >ref|NP_691632.1| 6-aminohexanoate-cyclic-dimer hydrolase [Oceanobacillus iheyensis HTE831] dbj|BAC12667.1| 6-aminohexanoate-cyclic-dimer hydrolase [Oceanobacillus iheyensis HTE831] Length = 502 Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 76/151 (50%), Positives = 101/151 (66%), Gaps = 1/151 (0%) Query: 1 MTLSAYSTYDALGLAALVRAREVSPRELVEAAFARLDEVNPLLNAVVRTRREAALKEADA 60 M + Y ++DA+GLA L++ ++V EL+ AF RL+EVN LN + +R E KEA Sbjct: 1 MNFNEYISHDAIGLAKLIKNKQVHANELINLAFNRLNEVNDELNIITHSREERVKKEA-L 59 Query: 61 MPPDDPSRPFAGVPFLLKDISQAIGGEPLTSGALLLKDNIAKRDSNYVARIRAGGFIPLG 120 P+ F GVP L+K+ISQAI GEP++SG+ LLKD K D+ +V + R GF+ +G Sbjct: 60 NEITIPNGMFQGVPILMKNISQAIEGEPMSSGSKLLKDVTYKHDNYFVKKFREAGFLFMG 119 Query: 121 HTNTPEFGLKNITEPLLHGPARNPWSTDCSP 151 HTNTPEFGLKNITEP L+G NPW+T SP Sbjct: 120 HTNTPEFGLKNITEPQLYGATHNPWNTLHSP 150 >gb|AAS70961.1| 6-aminohexanoate-cyclic-dimer hydrolase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 500 Score = 141 bits (355), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 69/146 (47%), Positives = 96/146 (65%), Gaps = 3/146 (2%) Query: 6 YSTYDALGLAALVRAREVSPRELVEAAFARLDEVNPLLNAVVRTRREAALKEADAMPPDD 65 Y+ YDA+GLA LVR + + P ELVE+A R++ +NP LNAV+ E A K + + P+ Sbjct: 14 YTYYDAIGLATLVRKKLIHPIELVESAIQRIETINPGLNAVITRFYEEARKTSKSKLPNG 73 Query: 66 PSRPFAGVPFLLKDISQAIGGEPLTSGALLLKDNIAKRDSNYVARIRAGGFIPLGHTNTP 125 P F GVP L+KD+ +IGG PLT G+ ++ I+ +DS ++ R+R G I LG TN P Sbjct: 74 P---FRGVPILVKDMVHSIGGAPLTCGSKAFRNYISPQDSEFIKRLRKTGTIFLGQTNVP 130 Query: 126 EFGLKNITEPLLHGPARNPWSTDCSP 151 EF L ITEP L+GP RNPW+ + +P Sbjct: 131 EFALMGITEPKLYGPTRNPWNLERTP 156 >ref|NP_711514.1| putative amidase [Leptospira interrogans serovar lai str. 56601] gb|AAN48532.1| putative amidase [Leptospira interrogans serovar lai str. 56601] Length = 500 Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 69/146 (47%), Positives = 96/146 (65%), Gaps = 3/146 (2%) Query: 6 YSTYDALGLAALVRAREVSPRELVEAAFARLDEVNPLLNAVVRTRREAALKEADAMPPDD 65 Y+ YDA+GLA LVR + + P ELVE+A R++ +NP LNAV+ E A K + + P+ Sbjct: 14 YTYYDAIGLATLVRKKLIHPIELVESAIQRIETINPGLNAVITRFYEEARKTSKSKLPNG 73 Query: 66 PSRPFAGVPFLLKDISQAIGGEPLTSGALLLKDNIAKRDSNYVARIRAGGFIPLGHTNTP 125 P F GVP L+KD+ +IGG PLT G+ ++ I+ +DS ++ R+R G I LG TN P Sbjct: 74 P---FRGVPILVKDMVHSIGGAPLTCGSKAFRNYISPQDSEFIKRLRKTGTIFLGQTNVP 130 Query: 126 EFGLKNITEPLLHGPARNPWSTDCSP 151 EF L ITEP L+GP RNPW+ + +P Sbjct: 131 EFALMGITEPKLYGPTRNPWNLERTP 156 >gb|EAK51286.1| unknown [environmental sequence] Length = 506 Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/148 (45%), Positives = 89/148 (60%) Query: 4 SAYSTYDALGLAALVRAREVSPRELVEAAFARLDEVNPLLNAVVRTRREAALKEADAMPP 63 S Y +DA+GLAALVR R+ SPREL++AA + + VN +NA+V EAA + A A P Sbjct: 17 SDYLAHDAIGLAALVRERKASPRELLDAAIGQAEAVNGAINAIVLQDYEAARQRAAATPD 76 Query: 64 DDPSRPFAGVPFLLKDISQAIGGEPLTSGALLLKDNIAKRDSNYVARIRAGGFIPLGHTN 123 PFAGVP+L+KD+ A+ G PL+ G+ + + DS +AR RA G G TN Sbjct: 77 GGAGAPFAGVPYLVKDLGAAVAGLPLSMGSRHYRYFVPADDSPVIARSRAAGLNVFGKTN 136 Query: 124 TPEFGLKNITEPLLHGPARNPWSTDCSP 151 T E G TEP L G RNPW+ D +P Sbjct: 137 TSEIGQMPYTEPELFGACRNPWNLDHTP 164 >ref|ZP_00069779.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Oenococcus oeni MCW] Length = 488 Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 63/140 (45%), Positives = 86/140 (61%), Gaps = 2/140 (1%) Query: 10 DALGLAALVRAREVSPRELVEAAFARLDEVNPLLNAVVRTRREAALKEADAMPPDDPSRP 69 DA A LVR S +LVE + ++++ N LNAV R + AL+EA + +D +P Sbjct: 3 DASRQAELVREGITSSSDLVEQSLNKIEKGNSQLNAVTYLRADRALEEAKQI--NDHGQP 60 Query: 70 FAGVPFLLKDISQAIGGEPLTSGALLLKDNIAKRDSNYVARIRAGGFIPLGHTNTPEFGL 129 F GVP LLK + Q + GEP T+ + LLK +A + YV ++ GFI +G TN PEFG Sbjct: 61 FFGVPILLKGLGQKLAGEPATASSRLLKKLVADQTDFYVQALQKAGFIVIGQTNAPEFGF 120 Query: 130 KNITEPLLHGPARNPWSTDC 149 KNIT+P L+GP RNPW+ D Sbjct: 121 KNITDPTLYGPTRNPWNLDY 140 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.316 0.135 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 251,848,976 Number of extensions: 10592788 Number of successful extensions: 22649 Number of sequences better than 1.0e-05: 731 Number of HSP's gapped: 22292 Number of HSP's successfully gapped: 731 Length of query: 191 Length of database: 757,237,578 Length adjustment: 119 Effective length of query: 72 Effective length of database: 434,140,797 Effective search space: 31258137384 Effective search space used: 31258137384 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 122 (51.6 bits)