BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0443.0033.p (1447 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_470123.1| lin0781 [Listeria innocua] >gi|25515722|pir||AE... 1709 0.0 ref|NP_464315.1| lmo0788 [Listeria monocytogenes EGD-e] >gi|2551... 1706 0.0 ref|NP_782864.1| putative activator of (R) -2-hydroxyglutaryl-co... 1607 0.0 ref|NP_349016.1| Activator of 2-hydroxyglutaryl-CoA dehydratase ... 1595 0.0 ref|ZP_00098635.1| COG3581: Uncharacterized protein conserved in... 1512 0.0 >ref|NP_470123.1| lin0781 [Listeria innocua] pir||AE1530 hypothetical protein lin0781 [imported] - Listeria innocua (strain Clip11262) emb|CAC96013.1| lin0781 [Listeria innocua] Length = 1475 Score = 1709 bits (4425), Expect = 0.0, Method: Compositional matrix adjust. Identities = 822/1406 (58%), Positives = 1031/1406 (73%), Gaps = 2/1406 (0%) Query: 19 MLRIGLDVGSTTAKLVVM-EHDVIVYQDYVRHFSDIKKAALSLLSDVRDRFPDREAALTV 77 M+ GLDVGSTTAK V + + I++Q Y RHFSDIKK L ++ D++ + E + Sbjct: 1 MIHAGLDVGSTTAKAVALNDQGDILFQTYRRHFSDIKKVTLEIMQDMQKKCGMTEMTFKI 60 Query: 78 XXXXXXXXXXXXEVPFVQEVIACTKAISELIPQCDTAIELGGEDAKIIYLSGGIEQRMNT 137 VPFVQEVIACT+A+ ++IP+ D IELGGEDAKIIY SGGIEQRMN Sbjct: 61 TGSSGLAISKFLNVPFVQEVIACTEAVEQVIPETDVVIELGGEDAKIIYFSGGIEQRMNN 120 Query: 138 ACAGGTGAFIDQMASLLQTDPAGLNVLAEQHERIYPIASRCGVFAKSDVQPLLNEGARRE 197 ACAGGTGAFIDQ+A+LLQTDP GLN LA+ IYPIASRCGVFAK+DVQPLLNEGAR+E Sbjct: 121 ACAGGTGAFIDQIATLLQTDPTGLNELAQNANTIYPIASRCGVFAKTDVQPLLNEGARKE 180 Query: 198 DVAASIFQSIVNQTISGLACGRPIRGRVAFLGGPLTFLPALRERFAETLGLSDSDVLFPE 257 D+AASIFQS+V QTISGLACGRPIRG+VAFLGGPLTFL LR RF ETL + DSD++ P+ Sbjct: 181 DIAASIFQSVVTQTISGLACGRPIRGKVAFLGGPLTFLDQLRYRFTETLKMKDSDIIAPQ 240 Query: 258 HSQYFVAIGSALSQTDPLVLPLSGWMARLDAVDFSADRAEDAELQPLFASPEALEQFRLR 317 +++YF+A+G+A + + + + ++ + RL +D + + L LF + E LE FR R Sbjct: 241 NAEYFIALGTAFTGLNDVPIKVADMINRLSNMDMTTMATDTVILPALFENNEDLEDFRAR 300 Query: 318 HSRAAAPRSELDTYQGPCYLGIDAGSTTTKLVITGAADEILYTFYGSNKGNPLQSVSDAL 377 H++ A R++L+ Y+G YLGIDAGSTTTKL++ +EILY+FY SN GNPLQSV DA Sbjct: 301 HNQMKAKRAKLEEYEGDAYLGIDAGSTTTKLILMSQTNEILYSFYSSNNGNPLQSVIDAT 360 Query: 378 KEIYRILPEGCHIAGAYATGYGEGLVKAALRTDGGEVETVAHYKAASKFMPEVDFILDIG 437 ++Y ILPE IA + TGYGE L+KAAL+ D GE+ETVAHY+AA +F+P+VDFILDIG Sbjct: 361 SDLYEILPEKVRIAQSGITGYGESLIKAALKIDVGEIETVAHYRAAREFLPDVDFILDIG 420 Query: 438 GQDMKCIKIRGGAIDSLMLNEACSAGCGSFLESFASALGLGIGEFAAAALESAQPVNLGS 497 GQDMKC+KI+ GA+DSLMLNEACSAGCGSFLE+FA L L I EFAA ALE+ PV+LGS Sbjct: 421 GQDMKCMKIKKGALDSLMLNEACSAGCGSFLETFAQTLNLSIEEFAARALEAKAPVDLGS 480 Query: 498 RCTVFMNSKVKQVQKEGATLADLSAGLAYSVIKNALQKVIKIRNADDLGRNIIVQGGTFY 557 RCTVFMNSKVKQVQKEG ++ DLSAGLAYSV+KNALQKVIK+R+ D+G +IVQGGTFY Sbjct: 481 RCTVFMNSKVKQVQKEGVSMEDLSAGLAYSVVKNALQKVIKLRSPKDIGEKVIVQGGTFY 540 Query: 558 NEAVLRAFELLTGRTVVRPDIAGVMGAYGCALLAREHAGFDGVSTLLGPEELEAFKYEVS 617 NE+VLRAFELLTGR VVRPDIAG+MGAYG AL+AREH V+ +L E+L F + S Sbjct: 541 NESVLRAFELLTGREVVRPDIAGMMGAYGAALIAREHYETGEVTEMLVLEKLREFSADTS 600 Query: 618 PGRCRLCANNCALTISRFPDKSFHVTGNRCERGAGGKKEKNNLPNLMQYKYERFFDYEGL 677 RC LC+N C LT++RF D V+GNRCERG + ++N LPNL YK +R FDY+ L Sbjct: 601 QSRCNLCSNTCQLTVTRFGDDRMFVSGNRCERGERVETKRNLLPNLYAYKLKRTFDYKSL 660 Query: 678 PVEQAERGTVGIPRTMNMFENYPFWHTFFTTLRYRTVLSPKSSKKLYESGMDTIPSESIC 737 +A RGT+GIPR +N+FENYP WHT T L +R VLS KSSK LY+ G++TI SE++C Sbjct: 661 KKSEATRGTIGIPRALNVFENYPLWHTILTNLGFRVVLSSKSSKNLYDKGIETIASEAVC 720 Query: 738 YPAKMAHGHVQSLLGKGVDFIFYPAVVYEKKEDDAAQNHFNCPVVASYPEVIRNNMDGLK 797 +PAK+ HGH+ L+ K D IFYP+VVYEK E A N+FNCPVVA YPEVIR N+D L+ Sbjct: 721 FPAKLTHGHIMDLIKKKADRIFYPSVVYEKPEFGEATNNFNCPVVAGYPEVIRVNVDALE 780 Query: 798 EKNIPLVSPFLTFDDIPALTRVLVKTFMDIPKEEIAAAVQTGLAEAERAKADLRNKGEET 857 EKNIP++SPFLT D+ AL + F +IP ++ AVQ GL EAE + D++ +GE Sbjct: 781 EKNIPMISPFLTLDNEKALIEQMSLAFPEIPAADMEKAVQAGLEEAELCRKDIQAEGEAA 840 Query: 858 LEFLTHSGTKGILLCGHPYHADPEINHGIAEMITGMGLAVLTEDSICHLDRSEGEVGVVN 917 L ++ + KGI+L GHPYH DPE+NHGI E+IT G+AVLTEDSI HL + ++ V N Sbjct: 841 LTYIKKNKIKGIVLAGHPYHIDPEVNHGIPELITMNGMAVLTEDSISHLGEIDHKLRVEN 900 Query: 918 QWTYHARMYRAARLAASRNDLELVQLTSFGCGIDAITCDAVQEILERNNKVYTLIKIDEI 977 QW YHAR+YRAA A DLE VQLTSFGCG+DAIT D QEI+E +NKVYTL+KIDEI Sbjct: 901 QWKYHARLYRAASFTAKSEDLEFVQLTSFGCGLDAITTDMCQEIIEGHNKVYTLLKIDEI 960 Query: 978 SNXXXXXXXXXXXXXXXXEREKGDVKPQLLYKTQANMPFTKEMKETYTILAPQMSPIHFE 1037 +N EREK +VKP ++ K + FTKEMK+TYTILAPQ++P HFE Sbjct: 961 NNLGAARIRVRSLKAAMEEREKNNVKPGIMAKPKERPLFTKEMKKTYTILAPQLAPTHFE 1020 Query: 1038 LFERVFRDAGYRLKILESTGPKETEEGLRYVNNDACYPAIVTIGQMLSALKSGDYDPDRT 1097 + E + GY L++L + P+ +EGLRYVNNDACYPAI+TIGQM+ ALK GDYD + Sbjct: 1021 MLEAACKVGGYNLEVLPAVTPRAVDEGLRYVNNDACYPAILTIGQMMDALKHGDYDVNNL 1080 Query: 1098 AVIMSQTGGGCRATNYISLLRKALKDSGLGQIPVISLNASGMENQPGFRISLRLANRLIA 1157 AV+M+QTGGGCRATNYIS+L+KAL ++GL IPVISLNA+G+E QPGF+++ ++ R +A Sbjct: 1081 AVLMTQTGGGCRATNYISMLKKALGEAGLDHIPVISLNANGLEKQPGFKMTPKVLIRFLA 1140 Query: 1158 AACYGDLMMRLLHRFRPYEVIPGSAQALFRKGMDRCKSSLSTFSFREYKRLTREIVAEFV 1217 GD + R+L+R RPYEV PGSA LFRK +D ++ + +SF YK+L E+V F Sbjct: 1141 GISLGDALDRMLYRTRPYEVEPGSANKLFRKYLDAGRALMENYSFVAYKKLANEMVRAFD 1200 Query: 1218 QLPVIKTVKPQVGIVGEILIKFHPDANNHXXXXXXXXXXXXVMPDFLDFIFYCVYNPIYK 1277 LP+ VKP+VG+VGEIL+KFHP ANN+ V+PD DFI YC Y+ + Sbjct: 1201 NLPITNEVKPRVGVVGEILVKFHPGANNNIVDVIEDEGGEAVVPDLTDFILYCCYDDHFA 1260 Query: 1278 AEQFGKSKKLGFF-NPMLISYLEIYRKPVKAALEEAGLAKGRENIYGLAEKASRLVSVGN 1336 A FG+SK F + I + +RKPV AL+++ + +I +AEKAS+L+S+GN Sbjct: 1261 ANTFGRSKVKSFAKQSVAIPLINQFRKPVTDALKKSERFEAPASIESIAEKASQLLSLGN 1320 Query: 1337 QMGEGWFLTAEMMDLLDNGVNNIACIQPFACLPNHITGRGMIKGLKDLYPGANIAAIDYD 1396 +MGEGWFLT EM +LLD+ V NIAC+QPFACLPNHITGRGMIKGLK +YP ANI +IDYD Sbjct: 1321 KMGEGWFLTGEMFELLDSNVPNIACLQPFACLPNHITGRGMIKGLKKMYPEANIMSIDYD 1380 Query: 1397 AGVSVVNQANRIKLMMSIASGLTSST 1422 AG S VNQ NRIKLM+SIA +T Sbjct: 1381 AGSSSVNQLNRIKLMLSIARKQLETT 1406 >ref|NP_464315.1| lmo0788 [Listeria monocytogenes EGD-e] pir||AD1173 hypothetical protein lmo0788 [imported] - Listeria monocytogenes (strain EGD-e) emb|CAC98866.1| lmo0788 [Listeria monocytogenes] Length = 1475 Score = 1706 bits (4419), Expect = 0.0, Method: Compositional matrix adjust. Identities = 820/1406 (58%), Positives = 1029/1406 (73%), Gaps = 2/1406 (0%) Query: 19 MLRIGLDVGSTTAKLVVM-EHDVIVYQDYVRHFSDIKKAALSLLSDVRDRFPDREAALTV 77 M+ GLDVGSTTAK V + + I++Q Y RH+SDIKK L ++ D++ + E + Sbjct: 1 MIHAGLDVGSTTAKAVALNDQGDILFQTYRRHYSDIKKVTLEIMQDMQKKCGMTEMTFKI 60 Query: 78 XXXXXXXXXXXXEVPFVQEVIACTKAISELIPQCDTAIELGGEDAKIIYLSGGIEQRMNT 137 VPFVQEVIACT+A+ ++IP+ D IELGGEDAKIIY SGGIEQRMN Sbjct: 61 TGSSGLAISKFLNVPFVQEVIACTEAVEQVIPETDVVIELGGEDAKIIYFSGGIEQRMNN 120 Query: 138 ACAGGTGAFIDQMASLLQTDPAGLNVLAEQHERIYPIASRCGVFAKSDVQPLLNEGARRE 197 ACAGGTGAFIDQ+A+LLQTDP GLN LA+ IYPIASRCGVFAK+DVQPLLNEGAR+E Sbjct: 121 ACAGGTGAFIDQIATLLQTDPTGLNELAQNANTIYPIASRCGVFAKTDVQPLLNEGARKE 180 Query: 198 DVAASIFQSIVNQTISGLACGRPIRGRVAFLGGPLTFLPALRERFAETLGLSDSDVLFPE 257 D+AASIFQS+V QTISGLACGRPIRG+VAFLGGPLTFL LR RF ETL + DSD++ P+ Sbjct: 181 DIAASIFQSVVTQTISGLACGRPIRGKVAFLGGPLTFLDQLRYRFTETLKMRDSDIIAPQ 240 Query: 258 HSQYFVAIGSALSQTDPLVLPLSGWMARLDAVDFSADRAEDAELQPLFASPEALEQFRLR 317 +++YF+A+G+A + + + L + + RL +D + + L LF E LE FR R Sbjct: 241 NAEYFIALGTAFTGLNDIPLKVDDMIHRLSNMDMTTMATDTVILPALFEKQEDLEDFRAR 300 Query: 318 HSRAAAPRSELDTYQGPCYLGIDAGSTTTKLVITGAADEILYTFYGSNKGNPLQSVSDAL 377 H++ A R++L+ Y+G YLGIDAGSTTTKL++ +EILY+FY SN GNPLQSV DA Sbjct: 301 HNQMKAKRAKLEDYEGDAYLGIDAGSTTTKLILMSQTNEILYSFYSSNNGNPLQSVIDAT 360 Query: 378 KEIYRILPEGCHIAGAYATGYGEGLVKAALRTDGGEVETVAHYKAASKFMPEVDFILDIG 437 ++Y ILPE +A + TGYGE L+KAAL+ D GE+ETVAHY+AA +F+P+VDFILDIG Sbjct: 361 SDLYEILPEKVRVAQSGITGYGESLIKAALKIDVGEIETVAHYRAAREFLPDVDFILDIG 420 Query: 438 GQDMKCIKIRGGAIDSLMLNEACSAGCGSFLESFASALGLGIGEFAAAALESAQPVNLGS 497 GQDMKC+KI+ GA+DSLMLNEACSAGCGSFLE+FA L L I EFAA ALE+ PV+LGS Sbjct: 421 GQDMKCMKIKKGALDSLMLNEACSAGCGSFLETFAQTLNLSIEEFAARALEAKAPVDLGS 480 Query: 498 RCTVFMNSKVKQVQKEGATLADLSAGLAYSVIKNALQKVIKIRNADDLGRNIIVQGGTFY 557 RCTVFMNSKVKQVQKEG ++ DLSAGLAYSV+KNALQKVIK+R+ D+G +IVQGGTFY Sbjct: 481 RCTVFMNSKVKQVQKEGVSMEDLSAGLAYSVVKNALQKVIKLRSPKDIGEKVIVQGGTFY 540 Query: 558 NEAVLRAFELLTGRTVVRPDIAGVMGAYGCALLAREHAGFDGVSTLLGPEELEAFKYEVS 617 NE+VLRAFELLTGR VVRPDIAG+MGAYG AL+AREH V+ +L E+L F E S Sbjct: 541 NESVLRAFELLTGREVVRPDIAGMMGAYGAALIAREHYETGEVTEMLVLEKLREFSAETS 600 Query: 618 PGRCRLCANNCALTISRFPDKSFHVTGNRCERGAGGKKEKNNLPNLMQYKYERFFDYEGL 677 RC LC+N C LT++RF D V+GNRCERG + ++N LPNL YK +R FDY+ L Sbjct: 601 QSRCNLCSNTCQLTVTRFGDDRMFVSGNRCERGERVETKRNLLPNLYAYKLKRTFDYKSL 660 Query: 678 PVEQAERGTVGIPRTMNMFENYPFWHTFFTTLRYRTVLSPKSSKKLYESGMDTIPSESIC 737 +A RGT+GIPR +N+FENYP WHT T L +R VLS KSSK LY+ G++TI SE++C Sbjct: 661 KKSEATRGTIGIPRALNVFENYPLWHTILTNLGFRVVLSSKSSKNLYDKGIETIASEAVC 720 Query: 738 YPAKMAHGHVQSLLGKGVDFIFYPAVVYEKKEDDAAQNHFNCPVVASYPEVIRNNMDGLK 797 +PAK+ HGH+ L+ K D IFYP+VVYEK E A N+FNCPVVA YPEVIR N+D L+ Sbjct: 721 FPAKLTHGHIMDLIKKKADRIFYPSVVYEKPEFGEATNNFNCPVVAGYPEVIRVNVDALE 780 Query: 798 EKNIPLVSPFLTFDDIPALTRVLVKTFMDIPKEEIAAAVQTGLAEAERAKADLRNKGEET 857 EKNIP++SPFLT D+ AL + F ++P ++ AVQ GL EAE + D++ +GE Sbjct: 781 EKNIPMISPFLTLDNEKALIEQMSLAFPEVPAADMEKAVQAGLEEAELCRKDIQAEGEAA 840 Query: 858 LEFLTHSGTKGILLCGHPYHADPEINHGIAEMITGMGLAVLTEDSICHLDRSEGEVGVVN 917 L ++ + KGI+L GHPYH DPE+NHGI E+IT G+AVLTEDSI HL + ++ V N Sbjct: 841 LTYIKKNKIKGIVLAGHPYHIDPEVNHGIPELITMNGMAVLTEDSISHLGEIDHKLRVEN 900 Query: 918 QWTYHARMYRAARLAASRNDLELVQLTSFGCGIDAITCDAVQEILERNNKVYTLIKIDEI 977 QW YHAR+YRAA A DLE VQLTSFGCG+DAIT D QEI+E +NKVYTL+KIDEI Sbjct: 901 QWKYHARLYRAASFTAKSEDLEFVQLTSFGCGLDAITTDMCQEIIEGHNKVYTLLKIDEI 960 Query: 978 SNXXXXXXXXXXXXXXXXEREKGDVKPQLLYKTQANMPFTKEMKETYTILAPQMSPIHFE 1037 +N EREK +VKP ++ K + FTKEMK+TYTILAPQ++P HFE Sbjct: 961 NNLGAARIRVRSLKAAMEEREKNNVKPGIMAKPKERPLFTKEMKKTYTILAPQLAPTHFE 1020 Query: 1038 LFERVFRDAGYRLKILESTGPKETEEGLRYVNNDACYPAIVTIGQMLSALKSGDYDPDRT 1097 + E R GY L++L + P+ +EGLRYVNNDACYPAI+TIGQM+ ALK+GDYD + Sbjct: 1021 MLEAACRVGGYNLEVLPAVTPRAVDEGLRYVNNDACYPAILTIGQMMDALKNGDYDVNNL 1080 Query: 1098 AVIMSQTGGGCRATNYISLLRKALKDSGLGQIPVISLNASGMENQPGFRISLRLANRLIA 1157 AV+M+QTGGGCRATNYIS+L+KAL ++GL IPVISLNA+G+E QPGF+++ ++ R +A Sbjct: 1081 AVLMTQTGGGCRATNYISMLKKALGEAGLDHIPVISLNANGLEKQPGFKMTPKVLVRFLA 1140 Query: 1158 AACYGDLMMRLLHRFRPYEVIPGSAQALFRKGMDRCKSSLSTFSFREYKRLTREIVAEFV 1217 GD + R+L+R RPYEV PGSA +FR +D ++ + +SF YK+L E+V F Sbjct: 1141 GISLGDALDRMLYRTRPYEVEPGSANKMFRHYLDAGRALMENYSFGAYKKLANEMVRAFD 1200 Query: 1218 QLPVIKTVKPQVGIVGEILIKFHPDANNHXXXXXXXXXXXXVMPDFLDFIFYCVYNPIYK 1277 LP+ VKP+VG+VGEIL+KFHP ANN+ V+PD DFI YC Y+ + Sbjct: 1201 NLPITNEVKPRVGVVGEILVKFHPGANNNIVDVIEDEGGEAVVPDLTDFILYCCYDDHFA 1260 Query: 1278 AEQFGKSKKLGFF-NPMLISYLEIYRKPVKAALEEAGLAKGRENIYGLAEKASRLVSVGN 1336 A FG+SK F + I + +RKPV AL+++ + +I +AEKAS+L+S+GN Sbjct: 1261 ANTFGRSKVKSFAKQSVAIPLINQFRKPVTDALKKSERFEAPASIESIAEKASQLLSLGN 1320 Query: 1337 QMGEGWFLTAEMMDLLDNGVNNIACIQPFACLPNHITGRGMIKGLKDLYPGANIAAIDYD 1396 +MGEGWFLT EM +LLD+ V NIAC+QPFACLPNHITGRGMIKGLK +YP ANI +IDYD Sbjct: 1321 KMGEGWFLTGEMFELLDSNVPNIACLQPFACLPNHITGRGMIKGLKKMYPEANIMSIDYD 1380 Query: 1397 AGVSVVNQANRIKLMMSIASGLTSST 1422 AG S VNQ NRIKLM+SIA +T Sbjct: 1381 AGSSSVNQLNRIKLMLSIARKQLETT 1406 >ref|NP_782864.1| putative activator of (R) -2-hydroxyglutaryl-coA dehydratase [Clostridium tetani E88] gb|AAO36801.1| putative activator of (R) -2-hydroxyglutaryl-coA dehydratase [Clostridium tetani E88] Length = 1431 Score = 1607 bits (4162), Expect = 0.0, Method: Compositional matrix adjust. Identities = 758/1400 (54%), Positives = 1003/1400 (71%), Gaps = 4/1400 (0%) Query: 19 MLRIGLDVGSTTAKLVVMEHDV-IVYQDYVRHFSDIKKAALSLLSDVRDRFPDREAALTV 77 + +GLD+GSTTAK+VV++ D I+Y Y RHFSDIK + +L +V +F +A + V Sbjct: 4 IFHLGLDIGSTTAKIVVLDQDKNIIYSMYERHFSDIKNIVIKILKNVNTKFTIEDATIMV 63 Query: 78 XXXXXXXXXXXXEVPFVQEVIACTKAISELIPQCDTAIELGGEDAKIIYLSGGIEQRMNT 137 +PF+QEVIA TKAI +L + D AIELGGEDAKI + +GGI+QRMN Sbjct: 64 TGSGGLAVSEWLNIPFIQEVIASTKAIEKLAKETDVAIELGGEDAKITFFTGGIDQRMNG 123 Query: 138 ACAGGTGAFIDQMASLLQTDPAGLNVLAEQHERIYPIASRCGVFAKSDVQPLLNEGARRE 197 CAGGTGAFIDQMASLL+TD GLN LA++H+ IYPIA+RCGVFAK+DVQPLLN+GA +E Sbjct: 124 TCAGGTGAFIDQMASLLETDAMGLNELAKKHKIIYPIAARCGVFAKTDVQPLLNQGAAKE 183 Query: 198 DVAASIFQSIVNQTISGLACGRPIRGRVAFLGGPLTFLPALRERFAETLGLSDSDVLFPE 257 D+A SIFQ++VNQTISGLACG+ I+G VAFLGGPL FL L+ RF TL L D +V+ P+ Sbjct: 184 DIAVSIFQAVVNQTISGLACGKVIKGNVAFLGGPLHFLSELKNRFISTLNLKDEEVIAPK 243 Query: 258 HSQYFVAIGSALSQTDPLVLPLSGWMARLDAVDFSADRAEDAELQPLFASPEALEQFRLR 317 +S+ FVA+G+A+S D V+ ++ + + + ++ E L+PLF + + LE+FR R Sbjct: 244 NSELFVALGAAISSLDKDVVNFKEFINKTNNIKNLTNK-EVRNLEPLFRNKKELEEFRSR 302 Query: 318 HSRAAAPRSELDTYQGPCYLGIDAGSTTTKLVITGAADEILYTFYGSNKGNPLQSVSDAL 377 H+++ R LD + G C+LGID+GSTTTK+V+ +LY YG+NKGNPL+S + L Sbjct: 303 HNKSKIKRKSLDGFIGNCFLGIDSGSTTTKIVLIDEEGNLLYYKYGNNKGNPLKSTIEFL 362 Query: 378 KEIYRILPEGCHIAGAYATGYGEGLVKAALRTDGGEVETVAHYKAASKFMPEVDFILDIG 437 KE+Y I+P IA + TGYGE L+KAAL D GEVETV+HYK A F+PEVDFILDIG Sbjct: 363 KEVYEIIPSNAKIASSAVTGYGEALIKAALCVDVGEVETVSHYKGAQFFLPEVDFILDIG 422 Query: 438 GQDMKCIKIRGGAIDSLMLNEACSAGCGSFLESFASALGLGIGEFAAAALESAQPVNLGS 497 GQDMKC+ I+ G IDS+MLNEACS+GCGSF+E+FA +L + + FA AL PV+LGS Sbjct: 423 GQDMKCLIIKDGVIDSIMLNEACSSGCGSFIETFAHSLNIDVENFAKEALLGEHPVDLGS 482 Query: 498 RCTVFMNSKVKQVQKEGATLADLSAGLAYSVIKNALQKVIKIRNADDLGRNIIVQGGTFY 557 RCTVFMNSKVKQ QKEGA++ D+SAGL+YSVIKNAL KVIKIRN D++G+NIIVQGGTFY Sbjct: 483 RCTVFMNSKVKQAQKEGASIGDISAGLSYSVIKNALFKVIKIRNKDEIGKNIIVQGGTFY 542 Query: 558 NEAVLRAFELLTGRTVVRPDIAGVMGAYGCALLAREHAGFDGVSTLLGPEELEAFKYEVS 617 N++VLRAFE+++ R VVRPDIAG+MGA+G AL+A+E STL+ ++L+ F +S Sbjct: 543 NDSVLRAFEIVSEREVVRPDIAGLMGAFGAALIAKESYTKGYKSTLIKMDKLKEFTINLS 602 Query: 618 PGRCRLCANNCALTISRFPDKSFHVTGNRCERGAGGKKEKNNLPNLMQYKYERFFDYEGL 677 RC CANNC LTI++FPD ++GNRCE+GAG + K+ PNL +YKY R F Y+ L Sbjct: 603 LQRCGRCANNCLLTINKFPDGKKFISGNRCEKGAGREINKSKAPNLYEYKYNRIFSYKSL 662 Query: 678 PVEQAERGTVGIPRTMNMFENYPFWHTFFTTLRYRTVLSPKSSKKLYESGMDTIPSESIC 737 E+A RG VGIPR +N++ENYPFW+ FFT L++R LSP++SK +Y+ GM+TIPSES+C Sbjct: 663 KKEEAYRGIVGIPRVLNIYENYPFWYRFFTELKFRVELSPRTSKDIYKLGMETIPSESVC 722 Query: 738 YPAKMAHGHVQSLLGKGVDFIFYPAVVYEKKEDDAAQNHFNCPVVASYPEVIRNNMDGLK 797 YPAK+ HGH+ SL+ KG+DFIFYP + +E+KE A NHFNCP+V SYPEVI+NNMD L+ Sbjct: 723 YPAKLVHGHIASLINKGIDFIFYPCISHEQKEIKEATNHFNCPIVTSYPEVIKNNMDKLR 782 Query: 798 EKNIPLVSPFLTFDDIPALTRVLVKTF--MDIPKEEIAAAVQTGLAEAERAKADLRNKGE 855 E+NI + PFL+ ++ L + L + F +I + EI AV E ++ K DLRNKGE Sbjct: 783 ERNIKFMKPFLSLNNKNKLIKRLYEEFKEFNIDRNEIINAVNKAYEEDKKVKEDLRNKGE 842 Query: 856 ETLEFLTHSGTKGILLCGHPYHADPEINHGIAEMITGMGLAVLTEDSICHLDRSEGEVGV 915 E L++L + KGI+L G PYH DPEINHGI E+IT +AVLTEDS+ HL + + Sbjct: 843 EVLKYLKENNKKGIVLAGRPYHIDPEINHGIPEVITSYDIAVLTEDSVFHLGEVKRPLRA 902 Query: 916 VNQWTYHARMYRAARLAASRNDLELVQLTSFGCGIDAITCDAVQEILERNNKVYTLIKID 975 V+QW YH+R+Y AA + ++EL+QL SFGCG+DA+T D V++IL + K+YTL+KID Sbjct: 903 VDQWVYHSRLYEAASFVSKEENIELIQLNSFGCGLDAVTTDQVEDILNSHGKMYTLLKID 962 Query: 976 EISNXXXXXXXXXXXXXXXXEREKGDVKPQLLYKTQANMPFTKEMKETYTILAPQMSPIH 1035 E SN EREK KP+ L + + FT+EM++T+TIL PQM+PIH Sbjct: 963 EGSNLGAVRIRIRSLIAALNEREKRGFKPKKLVEDKPRKLFTREMRKTHTILCPQMAPIH 1022 Query: 1036 FELFERVFRDAGYRLKILESTGPKETEEGLRYVNNDACYPAIVTIGQMLSALKSGDYDPD 1095 FEL + F+ GY L++L S K +EGL+YVNNDACYP+++ IGQ++ ALKSG YD D Sbjct: 1023 FELVQEAFKSEGYNLEVLPSVDKKAIDEGLKYVNNDACYPSVIVIGQIMEALKSGKYDID 1082 Query: 1096 RTAVIMSQTGGGCRATNYISLLRKALKDSGLGQIPVISLNASGMENQPGFRISLRLANRL 1155 +TA+I+SQTGGGCRATNYI +RKALKD+ Q+PVIS N +G+E+ PGF+ISL LAN+ Sbjct: 1083 KTAIIISQTGGGCRATNYIGFIRKALKDADFTQVPVISANVAGLESNPGFKISLPLANKG 1142 Query: 1156 IAAACYGDLMMRLLHRFRPYEVIPGSAQALFRKGMDRCKSSLSTFSFREYKRLTREIVAE 1215 + A YGDL+MR++H+ RPYE I G+ L + M +CK ++S + +E+K +IV + Sbjct: 1143 LMALVYGDLLMRVIHKVRPYEKIKGTTNRLHEEWMKKCKENISNGNRKEFKDNIHKIVMD 1202 Query: 1216 FVQLPVIKTVKPQVGIVGEILIKFHPDANNHXXXXXXXXXXXXVMPDFLDFIFYCVYNPI 1275 F QL V +KP++G+VGEIL+KFHP ANN+ V+PD +DF YC YN Sbjct: 1203 FDQLEVKNIIKPKIGLVGEILVKFHPTANNNIVDIIEKEGGEAVIPDLIDFFMYCSYNMK 1262 Query: 1276 YKAEQFGKSKKLGFFNPMLISYLEIYRKPVKAALEEAGLAKGRENIYGLAEKASRLVSVG 1335 YK E+ K + I+ +E YRK +K AL+ + + I +A+ AS ++ +G Sbjct: 1263 YKYEKLSGKKLNAILGKIAINIMEFYRKELKQALDNSTRFSAPKKIDKIAKGASNILDLG 1322 Query: 1336 NQMGEGWFLTAEMMDLLDNGVNNIACIQPFACLPNHITGRGMIKGLKDLYPGANIAAIDY 1395 +Q GEGWFLT EM++L+++GV NI C+QPFACLPNH+TG+GMIK LK YPGANI AIDY Sbjct: 1323 HQTGEGWFLTGEMVELIESGVKNIVCMQPFACLPNHVTGKGMIKELKRTYPGANIVAIDY 1382 Query: 1396 DAGVSVVNQANRIKLMMSIA 1415 D G S VNQ NRIKLM S+A Sbjct: 1383 DPGASEVNQLNRIKLMFSVA 1402 >ref|NP_349016.1| Activator of 2-hydroxyglutaryl-CoA dehydratase (duplicated HSP70 class ATPase domain) fused to uncharacterized conserved protein [Clostridium acetobutylicum] pir||A97196 hypothetical protein CAC2401 [imported] - Clostridium acetobutylicum gb|AAK80356.1| Activator of 2-hydroxyglutaryl-CoA dehydratase (duplicated HSP70 class ATPase domain) fused to uncharacterized conserved protein [Clostridium acetobutylicum] Length = 1431 Score = 1595 bits (4129), Expect = 0.0, Method: Compositional matrix adjust. Identities = 761/1400 (54%), Positives = 990/1400 (70%), Gaps = 5/1400 (0%) Query: 20 LRIGLDVGSTTAKLVVME-HDVIVYQDYVRHFSDIKKAALSLLSDVRDRFPDREAALTVX 78 L +GLDVGSTT K+V++ +D IVY Y RH+SDIK +SL+++ ++F D + V Sbjct: 5 LHLGLDVGSTTVKIVILNSNDEIVYSKYERHYSDIKFTIISLITEAYEKFKDENVTVMVT 64 Query: 79 XXXXXXXXXXXEVPFVQEVIACTKAISELIPQCDTAIELGGEDAKIIYL-SGGIEQRMNT 137 +V F+QEVIACT I ++IP+ D AIELGGEDAKI Y I+QRMN Sbjct: 65 GSGGLSVSEWMDVKFIQEVIACTNTIEKIIPETDVAIELGGEDAKITYFYDNNIDQRMNG 124 Query: 138 ACAGGTGAFIDQMASLLQTDPAGLNVLAEQHERIYPIASRCGVFAKSDVQPLLNEGARRE 197 CAGGTGAFIDQMA+LL+TD +GLN LA++H+ IYPIA+RCGVFAK+DVQPLLNEGA +E Sbjct: 125 TCAGGTGAFIDQMATLLKTDASGLNKLAKEHKCIYPIAARCGVFAKTDVQPLLNEGAAKE 184 Query: 198 DVAASIFQSIVNQTISGLACGRPIRGRVAFLGGPLTFLPALRERFAETLGLSDSDVLFPE 257 D++ASIFQ++VNQTISGLACG+PI+G+VAFLGGPL FL LR+RF ETL L +S+V+FPE Sbjct: 185 DISASIFQAVVNQTISGLACGKPIKGKVAFLGGPLYFLSELRQRFIETLNLKESEVIFPE 244 Query: 258 HSQYFVAIGSALSQTDPLVLPLSGWMARLDAVDFSADRAEDAELQPLFASPEALEQFRLR 317 +SQ FVA+G+ALS ++ RL ++ ++ + + L PLF +F+ R Sbjct: 245 NSQLFVAMGAALSSKGEEIITFRDIKKRLLKLN-KSNNDDVSRLAPLFKDEADYNKFKTR 303 Query: 318 HSRAAAPRSELDTYQGPCYLGIDAGSTTTKLVITGAADEILYTFYGSNKGNPLQSVSDAL 377 H + + +L Y G C+LGIDAGSTTTK V+ E+LY++YGSN+G+PL S L Sbjct: 304 HDKNKVKKIDLQEYSGKCFLGIDAGSTTTKAVLISNGGELLYSYYGSNEGSPLNSSIKIL 363 Query: 378 KEIYRILPEGCHIAGAYATGYGEGLVKAALRTDGGEVETVAHYKAASKFMPEVDFILDIG 437 K+IY LPE +IA + TGYGE L+KAAL+ D GEVETVAHYKAA F P VDFILDIG Sbjct: 364 KDIYSKLPESAYIANSTVTGYGESLIKAALKIDIGEVETVAHYKAADFFQPGVDFILDIG 423 Query: 438 GQDMKCIKIRGGAIDSLMLNEACSAGCGSFLESFASALGLGIGEFAAAALESAQPVNLGS 497 GQDMKCI+++ G I S+ LNEACS+GCGSF+E+FA +L + + +FA AAL S PV+LGS Sbjct: 424 GQDMKCIRVKEGVISSVTLNEACSSGCGSFIETFAKSLNMDVRDFAKAALMSKNPVDLGS 483 Query: 498 RCTVFMNSKVKQVQKEGATLADLSAGLAYSVIKNALQKVIKIRNADDLGRNIIVQGGTFY 557 RCTVFMNSKVKQ QKEGA + ++SAGL+YSVIKNAL KVIK+RN +DLG+ +IVQGGTFY Sbjct: 484 RCTVFMNSKVKQAQKEGAEIGEISAGLSYSVIKNALFKVIKVRNPEDLGKKVIVQGGTFY 543 Query: 558 NEAVLRAFELLTGRTVVRPDIAGVMGAYGCALLAREHAGFDGVSTLLGPEELEAFKYEVS 617 N+AVLR+FE+++ R V+RPDIAG+MGA+G A++A+E ++LL +ELE FK + Sbjct: 544 NDAVLRSFEMISEREVIRPDIAGLMGAFGAAIIAKESLTEGYNTSLLREDELERFKTNTN 603 Query: 618 PGRCRLCANNCALTISRFPDKSFHVTGNRCERGAGGKKEKNNLPNLMQYKYERFFDYEGL 677 RC CANNC LT++ F D +TGNRCERGAG +KN+LPNL YKY++ F Y L Sbjct: 604 MRRCGKCANNCLLTVNEFSDGRHFITGNRCERGAGEDIKKNDLPNLYDYKYKKIFGYTPL 663 Query: 678 PVEQAERGTVGIPRTMNMFENYPFWHTFFTTLRYRTVLSPKSSKKLYESGMDTIPSESIC 737 E+A+RG VGIPR +NM+ENYPFWHTFFT L +R LSP+SSKK+YE GMDTIPSES+C Sbjct: 664 KKEEAKRGIVGIPRVLNMYENYPFWHTFFTELGFRVELSPRSSKKVYEKGMDTIPSESVC 723 Query: 738 YPAKMAHGHVQSLLGKGVDFIFYPAVVYEKKEDDAAQNHFNCPVVASYPEVIRNNMDGLK 797 YPAK+ HGH+ SL+ +G+ FIFYP V YEKKE + A NH+NCP+V SY EVIRNN+DGL+ Sbjct: 724 YPAKITHGHIVSLMERGIKFIFYPCVPYEKKEQEGASNHYNCPIVTSYAEVIRNNIDGLR 783 Query: 798 EKNIPLVSPFLTFDDIPALTRVLVKTF--MDIPKEEIAAAVQTGLAEAERAKADLRNKGE 855 + +I +PF++ DD L L++ ++ K E+ AV E E + D+R KGE Sbjct: 784 DGDILFKNPFVSLDDKEKLKSRLLEELQEFNLTKVEVNEAVNKAWQEQENLRQDIRKKGE 843 Query: 856 ETLEFLTHSGTKGILLCGHPYHADPEINHGIAEMITGMGLAVLTEDSICHLDRSEGEVGV 915 E LE+L +G KGI+L G PYH DPEINHGI E+I +AVLTEDSI HL E + + Sbjct: 844 EVLEYLKKTGKKGIVLSGRPYHIDPEINHGIPELINSFDMAVLTEDSIAHLGNVERPLRI 903 Query: 916 VNQWTYHARMYRAARLAASRNDLELVQLTSFGCGIDAITCDAVQEILERNNKVYTLIKID 975 V+QW YH+R+Y AA A ++LELVQL SFGCG+DA+T D V+EIL++ K+YTLIKID Sbjct: 904 VDQWVYHSRLYAAASFIAREDNLELVQLNSFGCGLDAVTTDQVEEILDQYGKIYTLIKID 963 Query: 976 EISNXXXXXXXXXXXXXXXXEREKGDVKPQLLYKTQANMPFTKEMKETYTILAPQMSPIH 1035 E SN EREK VKP+ ++ + FTKEMK+ +TIL PQM+P+H Sbjct: 964 EGSNLGAIRIRIRSLKAAMGEREKNGVKPERKFENPQRIVFTKEMKKKHTILMPQMAPMH 1023 Query: 1036 FELFERVFRDAGYRLKILESTGPKETEEGLRYVNNDACYPAIVTIGQMLSALKSGDYDPD 1095 F+ E + GY L ++ S K +EGL++VNNDACYP+I+ +GQML ALKSG YD + Sbjct: 1024 FQFLEMALKSEGYNLVVMPSVDKKCVDEGLKHVNNDACYPSIIVVGQMLEALKSGKYDLN 1083 Query: 1096 RTAVIMSQTGGGCRATNYISLLRKALKDSGLGQIPVISLNASGMENQPGFRISLRLANRL 1155 T+VI+SQTGGGCRATNYI +RKALKD+G G +PVI+++A E PG + + Sbjct: 1084 NTSVIISQTGGGCRATNYIGFIRKALKDAGYGNVPVIAISAQKFEKNPGITYGVSTGIKA 1143 Query: 1156 IAAACYGDLMMRLLHRFRPYEVIPGSAQALFRKGMDRCKSSLSTFSFREYKRLTREIVAE 1215 I A YGDL+MR+L + RPYE + GSA L+ K +D CK + +K+ R+IV E Sbjct: 1144 IKAVLYGDLLMRVLFKVRPYEKVEGSANKLYEKWVDICKKDSQNKKIKTFKKNVRDIVRE 1203 Query: 1216 FVQLPVIKTVKPQVGIVGEILIKFHPDANNHXXXXXXXXXXXXVMPDFLDFIFYCVYNPI 1275 F +L + KP+VG+VGEIL+KFHP ANN+ VMPD +DF+ Y YN Sbjct: 1204 FDELEINDVKKPKVGLVGEILVKFHPTANNNVVDVIEKEGAEAVMPDLMDFMLYSSYNAT 1263 Query: 1276 YKAEQFGKSKKLGFFNPMLISYLEIYRKPVKAALEEAGLAKGRENIYGLAEKASRLVSVG 1335 +K +KK + +LI +E +RKP+K AL E+ + ++I LA+ S +VS+G Sbjct: 1264 FKDRYLHNNKKSKILSNVLIDAIEYFRKPMKKALHESKRFEPPKSIKELADGVSDIVSLG 1323 Query: 1336 NQMGEGWFLTAEMMDLLDNGVNNIACIQPFACLPNHITGRGMIKGLKDLYPGANIAAIDY 1395 NQ GEGWFLTAEM++L++ G N+ C+QPFACLPNH+TG+GMIK LK YP ANIAA+D+ Sbjct: 1324 NQTGEGWFLTAEMVELIEGGTENVICMQPFACLPNHVTGKGMIKELKRRYPKANIAAVDF 1383 Query: 1396 DAGVSVVNQANRIKLMMSIA 1415 D G S VNQ NRIKLM+S A Sbjct: 1384 DPGASEVNQLNRIKLMLSTA 1403 >ref|ZP_00098635.1| COG3581: Uncharacterized protein conserved in bacteria [Desulfitobacterium hafniense] Length = 1415 Score = 1512 bits (3914), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/1402 (52%), Positives = 960/1402 (68%), Gaps = 6/1402 (0%) Query: 19 MLRIGLDVGSTTAKLVVMEHDV-IVYQDYVRHFSDIKKAALSLLSDVRDRFPDREAALTV 77 +L +GLDVGSTT K++++ + IVY+ Y+RHFS+IK LS+L D + + + + Sbjct: 4 VLNVGLDVGSTTVKMIILSPEQGIVYKQYLRHFSNIKDTVLSMLEDAKPILDGQLMTMMI 63 Query: 78 XXXXXXXXXXXXEVPFVQEVIACTKAISELIPQCDTAIELGGEDAKIIYLSGGIEQRMNT 137 +PFVQEVIA T A+ ++IPQ D AIELGGEDAKI Y IEQRMN Sbjct: 64 AGSGGFNLAKKLGIPFVQEVIAGTAAVKKMIPQTDVAIELGGEDAKITYFGESIEQRMNG 123 Query: 138 ACAGGTGAFIDQMASLLQTDPAGLNVLAEQHERIYPIASRCGVFAKSDVQPLLNEGARRE 197 CAGGTGAFIDQMASLLQ D GLN LA+ ++ IYPIASRCGVFAK+DVQPLLNEGA +E Sbjct: 124 TCAGGTGAFIDQMASLLQVDAEGLNELAKNYKTIYPIASRCGVFAKTDVQPLLNEGAAKE 183 Query: 198 DVAASIFQSIVNQTISGLACGRPIRGRVAFLGGPLTFLPALRERFAETLGLSDSDVLFPE 257 DVA S+ Q++VNQTI+ LA GRPIRGRVAFLGGPL FL LR+RF ETL L +FPE Sbjct: 184 DVAVSVLQAVVNQTITALAQGRPIRGRVAFLGGPLFFLSELRQRFIETLKLEGDYAVFPE 243 Query: 258 HSQYFVAIGSALSQTDPLVLPLSGWMARLDAVDFSADRAEDAELQPLFASPEALEQFRLR 317 +QYFVAIG+AL D P ++ S + E A +PLFA E FR R Sbjct: 244 DAQYFVAIGAALVARDEQAFPSQTVYDNAPHIN-SITQDEKAIAEPLFADQAEYEAFRER 302 Query: 318 HSRAAAPRSELDTYQGPCYLGIDAGSTTTKLVITGAADEILYTFYGSNKGNPLQSVSDAL 377 H+R R + Y G YLGIDAGSTTTK+ + +LY++YGSN G+PL+S AL Sbjct: 303 HARHKVNRKDPQGYTGHAYLGIDAGSTTTKVALIDDEGGLLYSYYGSNLGSPLESTIGAL 362 Query: 378 KEIYRILPEGCHIAGAYATGYGEGLVKAALRTDGGEVETVAHYKAASKFMPEVDFILDIG 437 KE+Y L G I + TGYGE L+K AL+ D GE+ETVAH KAA F+P V+F+LDIG Sbjct: 363 KEMYSQLNPGITIRNSTVTGYGEQLIKTALKVDIGEIETVAHAKAADFFLPGVNFVLDIG 422 Query: 438 GQDMKCIKIRGGAIDSLMLNEACSAGCGSFLESFASALGLGIGEFAAAALESAQPVNLGS 497 GQDMK + I+ G IDS+MLNEACS+GCGSF+E+FA++L + + EFA LES V+LG+ Sbjct: 423 GQDMKSLVIKNGVIDSIMLNEACSSGCGSFVETFANSLNMDVKEFARIGLESQNAVDLGT 482 Query: 498 RCTVFMNSKVKQVQKEGATLADLSAGLAYSVIKNALQKVIKIRNADDLGRNIIVQGGTFY 557 RCTVFMNSKVKQ QKEGAT++D+SAG++ SVIKNAL KVI++RN ++LG I+VQGGTFY Sbjct: 483 RCTVFMNSKVKQAQKEGATVSDISAGISMSVIKNALFKVIRLRNTEELGEKIVVQGGTFY 542 Query: 558 NEAVLRAFELLTGRTVVRPDIAGVMGAYGCALLAREHAGFDGVSTLLGPEELEAFKYEVS 617 NEAVLR+ E L GR VVRPDIAG+MGA+G AL+A+E + LL E+LE+F E + Sbjct: 543 NEAVLRSLEKLLGREVVRPDIAGIMGAFGAALIAKERCDLGHKTELLPAEQLESFATETT 602 Query: 618 PGRCRLCANNCALTISRFPDKSFHVTGNRCERGAGGKKEKNNLPNLMQYKYERFFDYEGL 677 RC LC NNC LT+ F + ++GNRCERGAG +K K LPNL YKY+R F Y+ L Sbjct: 603 MKRCGLCGNNCLLTVKHFSNGENFISGNRCERGAGQEKVKTELPNLYDYKYQRVFRYKPL 662 Query: 678 PVEQAERGTVGIPRTMNMFENYPFWHTFFTTLRYRTVLSPKSSKKLYESGMDTIPSESIC 737 ++A RG +GIPR +N++E+YPFW+TFFT L YR VLS +S+K LYESGMDTIPSES C Sbjct: 663 SAQEASRGVIGIPRVLNIYEDYPFWYTFFTELGYRVVLSGRSTKALYESGMDTIPSESEC 722 Query: 738 YPAKMAHGHVQSLLGKGVDFIFYPAVVYEKKEDDAAQNHFNCPVVASYPEVIRNNMDGLK 797 +PAK+ HGH+ L+ KGV IFYP++ + KED A NHFNCP+V SYPE IR NMD LK Sbjct: 723 FPAKLVHGHIVDLVKKGVKKIFYPSIPFNVKEDSEANNHFNCPIVTSYPETIRANMDILK 782 Query: 798 EKNIPLVSPFLTFDDIPALTRVLVKTFMD---IPKEEIAAAVQTGLAEAERAKADLRNKG 854 E+NI PFL D + + L++ + EIA A+ E K D+R KG Sbjct: 783 EENITFYQPFLPIDSPKHMRKRLIEELSKREGLTPREIAQAMDKAYGELANYKKDVRQKG 842 Query: 855 EETLEFLTHSGTKGILLCGHPYHADPEINHGIAEMITGMGLAVLTEDSICHLDRSEGEVG 914 EE L ++ G+KGI+L G PYH DPEI+HGI E++ G GL V++ED+I H+ E + Sbjct: 843 EEALHYMETHGSKGIVLAGRPYHIDPEIHHGIPELLQGFGLVVISEDAIRHMTNPERPMR 902 Query: 915 VVNQWTYHARMYRAARLAASRNDLELVQLTSFGCGIDAITCDAVQEILERNNKVYTLIKI 974 VV+QW YH R+Y AA+ A++ DLEL+QL SFGCG+DA+T D V EILER K+YT++KI Sbjct: 903 VVDQWMYHTRLYAAAQFVAAKPDLELIQLNSFGCGLDAVTTDQVSEILERYGKIYTVLKI 962 Query: 975 DEISNXXXXXXXXXXXXXXXXEREKGDVKPQLLYKTQANMPFTKEMKETYTILAPQMSPI 1034 DEI+N ER+K + +P+ LY + + FT+EMK+ YTI+APQM+P Sbjct: 963 DEITNLGAARIRIRSLLAAVQERDKRNFRPEKLYDPEGRVIFTEEMKKNYTIIAPQMAPH 1022 Query: 1035 HFELFERVFRDAGYRLKILESTGPKETEEGLRYVNNDACYPAIVTIGQMLSALKSGDYDP 1094 F+ + F AGYR+++L S +EGL++V+NDACYP I+ +GQ+L ALKSG YD Sbjct: 1023 QFQFLKTGFEKAGYRIEVLPSVDRGAIDEGLKHVHNDACYPTIIVVGQLLEALKSGKYDL 1082 Query: 1095 DRTAVIMSQTGGGCRATNYISLLRKALKDSGLGQIPVISLNASGMENQPGFRISLRLANR 1154 +RTAV++SQTGGGCRATNYI+ +RKALKD+G+ Q+PVISLNASG+E PGF+I+ ++ Sbjct: 1083 NRTAVLISQTGGGCRATNYIAFIRKALKDTGMDQVPVISLNASGLEANPGFKITAKMLPD 1142 Query: 1155 LIAAACYGDLMMRLLHRFRPYEVIPGSAQALFRKGMDRCKSSLSTFSFREYKRLTREIVA 1214 L+ YGDL+M +LHR RPYE +PGSA AL+ + +++C+ +L +E K +IVA Sbjct: 1143 LLWGIVYGDLLMNVLHRVRPYEKVPGSANALYDQWVEKCQEALRRGDKKEIKANIYKIVA 1202 Query: 1215 EFVQLPVIKT-VKPQVGIVGEILIKFHPDANNHXXXXXXXXXXXXVMPDFLDFIFYCVYN 1273 +F L + + VKP+VGIVGEIL+K+HP ANN+ PD + F+ YC Y Sbjct: 1203 DFDSLEIYEDRVKPKVGIVGEILVKYHPTANNNLVELLEAEGAEVTQPDLMGFLLYCAYC 1262 Query: 1274 PIYKAEQFGKSKKLGFFNPMLISYLEIYRKPVKAALEEAGLAKGRENIYGLAEKASRLVS 1333 K + S K F + + +E YRK ++ AL + I +A A +S Sbjct: 1263 YKIKFDVLSGSFKAMFNGMLTVKVMEYYRKDMRKALAASRRFTPPAAIEEIARSAEEHIS 1322 Query: 1334 VGNQMGEGWFLTAEMMDLLDNGVNNIACIQPFACLPNHITGRGMIKGLKDLYPGANIAAI 1393 + NQ GEGW+LT EM++LL +GV NIAC+QPF CLPNHI G+GMI+ L+ YP ANIA I Sbjct: 1323 LANQTGEGWYLTGEMVELLHSGVMNIACLQPFGCLPNHIIGKGMIRSLRRSYPKANIAVI 1382 Query: 1394 DYDAGVSVVNQANRIKLMMSIA 1415 DYD G S VNQ NRIKLM+S+A Sbjct: 1383 DYDPGASEVNQLNRIKLMLSVA 1404 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.320 0.137 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 2,032,009,928 Number of extensions: 84926164 Number of successful extensions: 193558 Number of sequences better than 1.0e-05: 96 Number of HSP's gapped: 193102 Number of HSP's successfully gapped: 160 Length of query: 1447 Length of database: 757,237,578 Length adjustment: 138 Effective length of query: 1309 Effective length of database: 382,553,916 Effective search space: 500763076044 Effective search space used: 500763076044 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)