BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0437.0034.p (440 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_696612.1| possible prolidase (X-Pro dipeptidase) or chlor... 369 e-101 ref|ZP_00120474.1| COG1228: Imidazolonepropionase and related am... 369 e-100 ref|NP_926463.1| hypothetical protein glr3517 [Gloeobacter viola... 194 3e-48 gb|EAI66786.1| unknown [environmental sequence] 184 4e-45 gb|EAI80538.1| unknown [environmental sequence] 176 1e-42 >ref|NP_696612.1| possible prolidase (X-Pro dipeptidase) or chlorohydrolase [Bifidobacterium longum NCC2705] gb|AAN25248.1| possible prolidase (X-Pro dipeptidase) or chlorohydrolase [Bifidobacterium longum NCC2705] Length = 448 Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust. Identities = 194/436 (44%), Positives = 274/436 (62%), Gaps = 7/436 (1%) Query: 5 YAFKNCNVIYGDAGRDVAAHMTILI-RDGLIQEIGKASETAIPSHYQAIDVEGKYVMPGL 63 +A + ++ GD + +MTI++ DG I+++ + ET+IP+ Y +D GK VMPGL Sbjct: 12 FALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIPAEYHYLDGTGKIVMPGL 71 Query: 64 INAHVHLFADGKPFT--LSASEGLLDFA-FHHMLDTRLGRSVLKKRMKRNALTALHSGVT 120 INAH HLF+ GKP L+ +G A F H + LG+ + +K NA T L SGVT Sbjct: 72 INAHTHLFSQGKPLNPKLATPKGQRMVATFAH---SPLGKPYMAATVKHNATTLLESGVT 128 Query: 121 TMRSVGEFFYTDVQLRDEIKANQFVGPNLLVSGYFLSVTGGHGAPYLALVGDSPWEARRN 180 T+R++G+ Y V LRD+I A Q +GP +L SG +++ GHGAP +AL +P EAR Sbjct: 129 TIRTLGDVGYEVVTLRDQIDAGQILGPRILASGPLMAIPEGHGAPLIALTSGTPEEARTA 188 Query: 181 VRINVKNGVDLIKICVTGGVTDAKMAGEAGRLQMTEEEVAAICEEAHKIGMRVAAHVEST 240 V N+K GV+ IKI TGGVTDA+ GEAG QM+ E++ AIC+EAH+ G+ V AH +S Sbjct: 189 VAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGAHAQSP 248 Query: 241 EGVRIALKGGVDTIEHGAEMDEEIIRLYQNNPRALKGYTALIPTLQAAYPSAKLDLSLTK 300 EGVR +L GVDTIEHG+ +D+E+I ++++NP AL+GY+ALIPTL A P L +T Sbjct: 249 EGVRRSLLAGVDTIEHGSVLDDELIGMFRHNPNALRGYSALIPTLSAGLPLTLLGQDVTG 308 Query: 301 VSETVKENSRRVYDSMLKGVRQAVEHNIKIGVGTDAAMPYVTHYDLWRELDHFMRQTKLN 360 +++ ENS+ V M+ G RQA E + IGVGTD M +V Y WREL+ + + Sbjct: 309 ITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGMTFVPQYATWRELELLVAYAGFS 368 Query: 361 SRRIIEQVTKSNAEILGIGHLTGSIDIGKQADLIVLEQNPLDNIQALADIAMVMVRGNLI 420 + T NA ILG+ TGS+++GK ADL+VL NPLD+++AL A+V+ G+ + Sbjct: 369 PAEALHAATAVNASILGVDAETGSLEVGKSADLLVLNANPLDDLRALEHPALVIAAGHPV 428 Query: 421 QTPAVNRIQAVDELLD 436 P R +D LLD Sbjct: 429 WRPGPKRFADIDALLD 444 >ref|ZP_00120474.1| COG1228: Imidazolonepropionase and related amidohydrolases [Bifidobacterium longum DJO10A] Length = 451 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 193/436 (44%), Positives = 274/436 (62%), Gaps = 7/436 (1%) Query: 5 YAFKNCNVIYGDAGRDVAAHMTILI-RDGLIQEIGKASETAIPSHYQAIDVEGKYVMPGL 63 +A + ++ GD + +MTI++ DG I+++ + ET+IP+ Y +D GK VMPGL Sbjct: 15 FALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIPAEYHYLDGTGKIVMPGL 74 Query: 64 INAHVHLFADGKPFT--LSASEGLLDFA-FHHMLDTRLGRSVLKKRMKRNALTALHSGVT 120 INAH HLF+ GKP L+ +G A F H + LG+ + ++ NA T L SGVT Sbjct: 75 INAHTHLFSQGKPLNPKLATPKGQRMVATFAH---SPLGKPYMAATVRHNATTLLESGVT 131 Query: 121 TMRSVGEFFYTDVQLRDEIKANQFVGPNLLVSGYFLSVTGGHGAPYLALVGDSPWEARRN 180 T+R++G+ Y V LRD+I A Q +GP +L SG +++ GHGAP +AL +P EAR Sbjct: 132 TIRTLGDVGYEVVTLRDQIDAGQILGPRILASGPLMAIPEGHGAPLIALTSGTPEEARTA 191 Query: 181 VRINVKNGVDLIKICVTGGVTDAKMAGEAGRLQMTEEEVAAICEEAHKIGMRVAAHVEST 240 V N+K GV+ IKI TGGVTDA+ GEAG QM+ E++ AIC+EAH+ G+ V AH +S Sbjct: 192 VAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGAHAQSP 251 Query: 241 EGVRIALKGGVDTIEHGAEMDEEIIRLYQNNPRALKGYTALIPTLQAAYPSAKLDLSLTK 300 EGVR +L GVDTIEHG+ +D+E+I ++++NP AL+GY+ALIPTL A P L +T Sbjct: 252 EGVRRSLLAGVDTIEHGSVLDDELIGMFRHNPNALRGYSALIPTLSAGLPLTLLGQDVTG 311 Query: 301 VSETVKENSRRVYDSMLKGVRQAVEHNIKIGVGTDAAMPYVTHYDLWRELDHFMRQTKLN 360 +++ ENS+ V M+ G RQA E + IGVGTD M +V Y WREL+ + + Sbjct: 312 ITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGMTFVPQYATWRELELLVAYAGFS 371 Query: 361 SRRIIEQVTKSNAEILGIGHLTGSIDIGKQADLIVLEQNPLDNIQALADIAMVMVRGNLI 420 + T NA ILG+ TGS+++GK ADL+VL NPLD+++AL A+V+ G+ + Sbjct: 372 PAEALHAATAVNASILGVDAETGSLEVGKSADLLVLNANPLDDLRALEHPALVIAAGHPV 431 Query: 421 QTPAVNRIQAVDELLD 436 P R +D LLD Sbjct: 432 WRPGPKRFADIDALLD 447 >ref|NP_926463.1| hypothetical protein glr3517 [Gloeobacter violaceus] dbj|BAC91458.1| glr3517 [Gloeobacter violaceus PCC 7421] Length = 441 Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 150/420 (35%), Positives = 217/420 (51%), Gaps = 42/420 (10%) Query: 17 AGRDVAAHMTILIRDGLIQEIGKASETAIPSHYQAIDVEGKYVMPGLINAHVHLFADGKP 76 AGR V + ILI ++ +G + +IP+ Q ID+ V+PGLI AH HL +D P Sbjct: 43 AGR-VLSDQIILIEGERVRAVGPSGTVSIPAGAQRIDLGRATVLPGLIEAHAHLTSD--P 99 Query: 77 FTLSASEGLLDFAFHHMLDTRLGRSVLKKRM--KRNALTALHSGVTTMRSVGEFFYTDVQ 134 F + +GL G S +++ + + A L +G TT+R+VG Y DV Sbjct: 100 FR-AGYQGL-------------GVSAIREALYGAKAARDTLEAGFTTVRNVGAGAYGDVA 145 Query: 135 LRDEIKANQFVGPNLLVSGYFLSVTGGHG-----AP---YLAL-VGDSPWEARRNVRINV 185 LRD I GP LLVSG L + GGH AP Y A V D PW AR VR V Sbjct: 146 LRDAINDGDIPGPRLLVSGPALGIKGGHCDNNLLAPDFNYTAEGVADGPWAARAKVREVV 205 Query: 186 KNGVDLIKICVTGGVTDAKMAGEAGRLQMTEEEVAAICEEAHKIGMRVAAHVESTEGVRI 245 K G D+IK+C TGGV + G Q T EE+ AI EEAHK+G +VAAH EG++ Sbjct: 206 KYGADVIKLCATGGVLSKNT--DPGVQQYTFEEMQAIVEEAHKLGRKVAAHAHGAEGIKQ 263 Query: 246 ALKGGVDTIEHGAEMDEEIIRLYQNNPRALKGYTALIPTLQAAYPSAKLDLSLTKVSETV 305 A++ GVD+IEH + +D E +RL + AL + + A A + + E++ Sbjct: 264 AIRAGVDSIEHASLIDAEGMRLARQKGTALVMDIYVDEFILAEGERAGI------LPESL 317 Query: 306 KENSRRVYDSMLKGVRQAVEHNIKIGVGTDAAM-PYVTHYDLWRELDHFMRQTKLNSRRI 364 E R+V R+A+ +I GTDA + P+ T+ + +M Q + + Sbjct: 318 -EKERKVGQLQRDNFRRALAAGDRIVFGTDAGVYPHGTNAKQF----AYMVQYGMTPMQA 372 Query: 365 IEQVTKSNAEILGIGHLTGSIDIGKQADLIVLEQNPLDNIQALADIAMVMVRGNLIQTPA 424 I+ T + AE+LG GS+ GK ADLI +E +PL ++ AL ++ VM G ++++ A Sbjct: 373 IQAATVNAAELLGWQDKVGSLTPGKYADLIAVEADPLKDVSALTRVSFVMKGGRVVKSAA 432 >gb|EAI66786.1| unknown [environmental sequence] Length = 417 Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 140/408 (34%), Positives = 205/408 (50%), Gaps = 46/408 (11%) Query: 27 ILIRDGLIQEIGKASETAIPSHYQAIDVEGKYVMPGLINAHVHLFADGKPFTLSASEGLL 86 ILI G+I ++ K + SHY+ ID++ ++PGL++AHVHL + L EG+ Sbjct: 43 ILIESGVIVKVSK--NIPVMSHYEIIDLQDMTILPGLMDAHVHLTGN---TDLKGHEGIS 97 Query: 87 DFAFHHMLDTRLGRSVLKKRMKRNALTALHSGVTTMRSVGEFFYTDVQLRDEIKANQFVG 146 + ++ L T G +NA L +G TT+R+VG Y+DV LRD I +G Sbjct: 98 ESSY---LATIYGV--------KNAKQTLMAGFTTVRNVGASNYSDVALRDGIDQKAILG 146 Query: 147 PNLLVSGYFLSVTGGHGAP--------YLAL-VGDSPWEARRNVRINVKNGVDLIKICVT 197 P LLVSG L +TGGH Y A V D PWE RR VR N K G DLIK C T Sbjct: 147 PTLLVSGPPLGITGGHCDSNILPAEYEYKAQGVADGPWEVRRKVRENKKYGADLIKYCAT 206 Query: 198 GGVTDAKMAGEAGRLQMTEEEVAAICEEAHKIGMRVAAHVESTEGVRIALKGGVDTIEHG 257 GGV Q T +E+ AI +EAH +GM+VAAH EG+R+A+K GVD++EH Sbjct: 207 GGVMSK--GTNVNNRQYTLDEMKAIVDEAHTLGMKVAAHAHGLEGIRMAIKAGVDSVEHS 264 Query: 258 AEMDEEIIRLYQNNPRALKGYTALIPTLQAAYPSAKLDLSLTKVSETVKENSRRVYDSML 317 + +D+E I L KG + + Y + + + E R V Sbjct: 265 SLIDQETINL-----AIAKGVFLAMDIYVSDYILG--EGAKNGIPEYSLNKERIVGKRQR 317 Query: 318 KGVRQAVEHNIKIGVGTDAAM-PYVTHYDLWRELDHFMRQTKLNSRRIIEQVTKSNAEIL 376 + + AVE K+ GTDA + P+ + ++ +M + + I+ T + AE+ Sbjct: 318 ENFKMAVESGAKMVFGTDAGIFPHGKNAKQFK----YMVEWGMKPIEAIQASTINTAELF 373 Query: 377 G---IGHLTGSIDIGKQADLIVLEQNPLDNIQALADIAMVMVRGNLIQ 421 G IG + + D ADLI ++ NPL +I L ++ +M G +I+ Sbjct: 374 GKTNIGEIKETFD----ADLIGVKGNPLKDITLLENVGFIMKEGQVIK 417 >gb|EAI80538.1| unknown [environmental sequence] Length = 412 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 133/382 (34%), Positives = 193/382 (50%), Gaps = 43/382 (11%) Query: 51 AIDVEGKYVMPGLINAHVHLFADGKP--FTLSASEGLLDFAFHHMLDTRLGRSVLKKRMK 108 AID+ G V+PGL++ HVHL + P +T + L D+A+ RS+ Sbjct: 51 AIDLNGYTVLPGLMDMHVHLSGESNPKRYTERFTMDLDDYAY---------RSIAY---- 97 Query: 109 RNALTALHSGVTTMRSVGEFFYTDVQLRDEIKANQFVGPNLLVSGYFLSVTGGHGAPY-- 166 A L +G TT+R +G T LRD I NQ VGP + +G ++ TGGH P Sbjct: 98 --AKRTLMAGFTTVRDLGGPINT--SLRDAINNNQVVGPRVYSAGKAIATTGGHADPTNG 153 Query: 167 --LALVGDSP---------WEARRNVRINVKNGVDLIKICVTGGVTDAKMAGEAGRLQMT 215 L+GD EAR+ VR KNG DLIKI TGGV GE + Q Sbjct: 154 MKFELMGDPGPAEGVVNGIAEARKAVRQRYKNGADLIKITATGGVLSVAKNGENPQFQ-- 211 Query: 216 EEEVAAICEEAHKIGMRVAAHVESTEGVRIALKGGVDTIEHGAEMDEEIIRLYQNNPRAL 275 E+E+ AI E A GM VAAH EG++ A++ GV +IEHG MDEE + L + Sbjct: 212 EDEIRAIVETATDYGMHVAAHAHGAEGMKRAVRAGVRSIEHGTLMDEETMALMKE----- 266 Query: 276 KGYTALIPTLQAAYPSAKLDLSLTKVSETVKENSRRVYDSMLKGVRQAVEHNIKIGVGTD 335 KG T IPT+ A A+ + V+ ++++ + K ++A + + I GTD Sbjct: 267 KG-TYYIPTISAGEFVAEKAEIDGYYPDIVRPKAKKIGPQIKKTFQKAYDAGVSIAFGTD 325 Query: 336 AAMPYVTHYDLWRELDHFMRQTKLNSRRIIEQVTKSNAEILGIGHLTGSIDIGKQADLIV 395 + + Y H D +E +M + ++ I TK+ AE+L I + G+I+ K AD+I Sbjct: 326 SGVSY--HGDNAKEF-AYMVEAGMSEIEAIISATKTAAELLEISNTLGTIEKDKLADIIA 382 Query: 396 LEQNPLDNIQALADIAMVMVRG 417 +E +P++NI AL + VM G Sbjct: 383 VEGDPIENIVALESVVFVMKNG 404 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.136 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 615,706,068 Number of extensions: 24566593 Number of successful extensions: 68993 Number of sequences better than 1.0e-05: 204 Number of HSP's gapped: 68603 Number of HSP's successfully gapped: 204 Length of query: 440 Length of database: 757,237,578 Length adjustment: 129 Effective length of query: 311 Effective length of database: 406,989,807 Effective search space: 126573829977 Effective search space used: 126573829977 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)