BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0437.0022.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_812428.1| arabinan endo-1,5-alpha-L-arabinosidase A precu... 312 7e-84 gb|EAA50617.1| hypothetical protein MG04376.4 [Magnaporthe grise... 300 3e-80 ref|NP_827557.1| putative endo-1,4-beta-xylanase [Streptomyces a... 195 1e-48 gb|EAA65035.1| hypothetical protein AN1870.2 [Aspergillus nidula... 166 5e-40 ref|NP_812586.1| endo-1,4-beta-xylanase D precursor [Bacteroides... 145 1e-33 >ref|NP_812428.1| arabinan endo-1,5-alpha-L-arabinosidase A precursor [Bacteroides thetaiotaomicron VPI-5482] gb|AAO78622.1| arabinan endo-1,5-alpha-L-arabinosidase A precursor [Bacteroides thetaiotaomicron VPI-5482] Length = 637 Score = 312 bits (799), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 143/299 (47%), Positives = 192/299 (64%), Gaps = 2/299 (0%) Query: 2 KEEHLLKGITNPVIPGWYADPEARTYQGRHWIYATRSFTEYTQQMNLDAFSSVDLIHWNK 61 + L K NP+ PGWYADPE + +WIY T S Y Q+ +DAFSS DL++W K Sbjct: 22 NKSKLPKTSGNPIFPGWYADPEGIVFGDEYWIYPTYS-AAYDDQIFMDAFSSKDLVNWTK 80 Query: 62 HDSIIEMKDFPWIWRAVWAPTQIEHQGRHYLVFASNDIQKDGEAGGLEIAVADSPEGPYR 121 H ++ ++ W+ RA+WAP I ++Y F +NDIQ + E GG+ +AVAD+P GP++ Sbjct: 81 HPKVLSKENISWLRRALWAPAVIHANDKYYFFFGANDIQNNNELGGIGVAVADNPAGPFK 140 Query: 122 GYLGKPLIDRFIHGAQPIDAHLFKDDDGAVYLFYGGWGHCNVARMNEDMTGFVAFSDGQT 181 LGKPLID+ ++GAQPID +FKDDDG Y++YGGWGHCN+ +M D+ V F DG Sbjct: 141 DALGKPLIDKIVNGAQPIDQFVFKDDDGQYYMYYGGWGHCNMVKMAPDLLSIVPFEDGTI 200 Query: 182 VRSITPPGYVEGPCMIRKDGLYYLMWSMGGWTNGTYRVAYGVSASPLGPFANEGTILERQ 241 + +TP YVEGP M++ +G YY MWS GGW Y VAY ++ SP GPF G IL++ Sbjct: 201 YKEVTPQNYVEGPFMLKHNGKYYFMWSEGGWGGPDYSVAYAIADSPFGPFERVGKILQQD 260 Query: 242 EPVAEGPGHHGYLHLPDEDEWLIVYHRRIIGDKEPGNRVLCIDRMEFEA-GRIKPVIMT 299 +A G GHH + P DEW I+YHRR +G+ +R CIDRM F G+I+PV MT Sbjct: 261 TNIATGAGHHSVVKGPGSDEWYIIYHRRPLGETAANSRATCIDRMYFNKDGKIEPVRMT 319 Score = 76.3 bits (186), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 82/299 (27%), Positives = 125/299 (41%), Gaps = 30/299 (10%) Query: 8 KGITNPVIPGWYADPEA-RTYQGRHWIYATRSFTEYTQQMNLDAFSSVDLIHWNKHDSII 66 K NPVI DP + +++YAT S N+ S DL++W + Sbjct: 335 KTYANPVINFSLPDPTIIKGDDEYYYLYATESIK------NVPIHRSRDLVNWYYVGTAF 388 Query: 67 EMKDFPWIWRA--VWAPTQIEHQGRHYLVFASNDIQKDGEAGGLEIAVADSPEGPYRGYL 124 P +WAP I G Y+++ S G+ IA AD PEGP+ L Sbjct: 389 TDATRPNFEPKGRIWAP-DINKIGDKYVMYYSMSTWGGEWTCGIGIATADKPEGPFTD-L 446 Query: 125 GKPLIDRFIHGAQPIDAHLFKDDDGAVYLFYGGWGHCNVARMNEDMTGFVAFSDGQTVRS 184 GK I+ ID + +D+G YLF+G + + +D ++ G + Sbjct: 447 GKLFRSNEINIQNCIDP-FYIEDNGKKYLFWGSFHGIYGTELTDDG---LSLKKGAPIEQ 502 Query: 185 ITPPGYVEGPCMIRKDGLYYLMWSMGGWTNG---TYRVAYGVSASPLGPFA--------- 232 I Y EG + ++DG YYL S+G G TY G S + GP+ Sbjct: 503 IAGTAY-EGTYIHKRDGYYYLFASIGRCCEGLKSTYTTVVGRSKNLFGPYVDKKGRSMSD 561 Query: 233 NEGTILERQEPVAEGPGHHGYLHLPDEDEWLIVYHRRIIGDKEPGNRVLCIDRMEFEAG 291 N IL ++ GPGH+ L + + YH + + P RVL +DR++++ G Sbjct: 562 NHHEILIQKNKAFVGPGHNSELVTDKKGNDWMFYHAVSVAN--PEGRVLMMDRVQWKGG 618 >gb|EAA50617.1| hypothetical protein MG04376.4 [Magnaporthe grisea 70-15] Length = 927 Score = 300 bits (768), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 142/288 (49%), Positives = 191/288 (66%), Gaps = 2/288 (0%) Query: 12 NPVIPGWYADPEARTYQGRHWIYATRSFTEYTQQMNLDAFSSVDLIHWNKHDSIIEMKDF 71 NP + GWYADP+ + Y+G +W+Y T S+ Y QQ LDAFSS DL++W KH I+ ++ Sbjct: 33 NPFVDGWYADPDCQFYRGEYWVYPTSSY-PYEQQTYLDAFSSPDLVNWTKHPRILTNENV 91 Query: 72 PWIWRAVWAPTQIEHQGRHYLVFASNDIQKDGEAGGLEIAVADSPEGPYRGYLGKPLIDR 131 W +A+WAP+ I G++YL F +NDIQ + E GG+ + VAD P GPY LG+PLID+ Sbjct: 92 TWAHKAMWAPSPISRNGKYYLYFGANDIQTNDELGGIGVGVADRPGGPYVDALGRPLIDK 151 Query: 132 FIHGAQPIDAHLFKDDDGAVYLFYGGWGHCNVARMNEDMTGFVAFSDGQTVRSITPPGYV 191 F +GAQPID ++F DDDG Y++YGGW HCNVA++NEDM F DG T + ITP YV Sbjct: 152 FHNGAQPIDQNVFIDDDGQAYIYYGGWSHCNVAKLNEDMISLGTFDDGTTYKEITPDQYV 211 Query: 192 EGPCMIRKDGLYYLMWSMGGWTNGTYRVAYGVSASPLGPFANEGTILERQEPVAEGPGHH 251 EG M++++G YY WS GGWT Y V+Y ++ SPLGPF IL++ VA G GH+ Sbjct: 212 EGALMMKRNGRYYFFWSEGGWTGPDYAVSYAIADSPLGPFNRIARILQQDPAVATGSGHN 271 Query: 252 GYLHLPDEDEWLIVYHRRIIGDKEPGNRVLCIDRMEFEA-GRIKPVIM 298 G L +P D IVYHR +GD++ +R L DR+ F G I+P+ M Sbjct: 272 GVLKVPGTDIHYIVYHRHPLGDQDGNHRQLAYDRIYFNPDGTIQPITM 319 >ref|NP_827557.1| putative endo-1,4-beta-xylanase [Streptomyces avermitilis MA-4680] dbj|BAC74092.1| putative endo-1,4-beta-xylanase [Streptomyces avermitilis MA-4680] Length = 735 Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 118/296 (39%), Positives = 161/296 (54%), Gaps = 21/296 (7%) Query: 12 NPVIPGWYADPEARTYQGRHWIYATRSFTEYTQQMNLDAFSSVDLIHWNKHDSIIEM-KD 70 +PV+PG YADP+ + GR+WIY T AFSS DL+HW H I+++ D Sbjct: 443 SPVLPGLYADPDIQYLDGRYWIYPTTDGFPGWSGTRFKAFSSKDLVHWKDHGVILDLGPD 502 Query: 71 FPWIWRAVWAPTQIEHQGRHYLVFASNDIQKDGEAGGLEIAVADSPEGPYRGYLGKPLID 130 W + WAP E G++Y F + Q+ G +AVADSP GP++ LGKPL+ Sbjct: 503 VTWADKNAWAPAIAERDGKYYFYFCAE--QQIG------VAVADSPAGPFKDALGKPLVA 554 Query: 131 RFIHGAQPIDAHLFKDDDGAVYLFYGGWGHCNVARMNEDMTGFVAFSDGQTVRSITPPGY 190 + Q ID +F DDDG YL++G GH V +N+DM + D V+ IT P + Sbjct: 555 KGKLAGQMIDPAVFTDDDGTSYLYWGN-GHGYVVPLNDDMVSY----DATKVKDITQPDF 609 Query: 191 VEGPCMIRKDGLYYLMWSMGGWTNGTYRVAYGVSASPLGPFANEGTIL-ERQEPVAEGPG 249 EG ++ + G YY MWS + Y V+Y SPLGP+ GTIL +R E +G G Sbjct: 610 REGSFVVERQGTYYFMWSEDDTGSENYHVSYATGPSPLGPWTKRGTILSKRPEYGIKGTG 669 Query: 250 HHGYLHLPDEDEWLIVYHR-RIIGDKEPG----NRVLCIDRMEFEA-GRIKPVIMT 299 HH +++P D+W IVYHR + G + G +R IDRM F A G I+PV T Sbjct: 670 HHSVVNVPGTDDWYIVYHRFALSGPGKAGGDGTHRETTIDRMTFAADGTIEPVTPT 725 >gb|EAA65035.1| hypothetical protein AN1870.2 [Aspergillus nidulans FGSC A4] Length = 307 Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 111/279 (39%), Positives = 144/279 (51%), Gaps = 46/279 (16%) Query: 12 NPVIPGWYADPEARTYQGRHWIYATRSFTEYTQQMNLDAFSSVDLIHWNKHDSIIEMKDF 71 NPV PGWYADPEAR + ++WIY T S Y +Q DAFSS DL+ W KH +I+ Sbjct: 33 NPVFPGWYADPEARIFNDQYWIYPTYS-AAYEEQTFFDAFSSPDLLTWTKHPAILNFSGI 91 Query: 72 PW-IWRAVWAPTQIEHQ--GRHYLVFASNDIQKDGE--------AG-GLEIAVADS---- 115 PW RA WAP+ + G + S D E AG G I VA S Sbjct: 92 PWSTNRAAWAPSVARRRRPGPANSITGSGIADTDAEYDYFMYFSAGDGAGIGVAKSTTGL 151 Query: 116 PEGPYRGYLGKPLIDRFIHGAQPIDAHLFKDD---DGAVYLFYGGWGHCNVARMNEDMTG 172 PEGP+ +GKPL+ + GA+ IDA LF+DD D ++L+YGGW H V MNEDM Sbjct: 152 PEGPFVDAIGKPLVPETVFGAEAIDAQLFQDDADGDNRIWLYYGGWSHAIVVEMNEDMVS 211 Query: 173 FVAFSDGQTVRSITPPGYVEGPCMIRKDGLYYLMWSMGGWTNGTYRVAYGVSASPLGPFA 232 G+ + ITP G +GGW + +Y V+Y SP GPF+ Sbjct: 212 L----KGEYLE-ITPEG-------------------VGGWGDNSYGVSYVTGPSPTGPFS 247 Query: 233 NEGT-ILERQEPVAEGPGHHGYLHLPDEDEWLIVYHRRI 270 + T IL + V G GH+ + PD +E+ IVYHRR+ Sbjct: 248 STPTQILRGNDQVGTGTGHNS-VFTPDGEEYYIVYHRRV 285 >ref|NP_812586.1| endo-1,4-beta-xylanase D precursor [Bacteroides thetaiotaomicron VPI-5482] gb|AAO78780.1| endo-1,4-beta-xylanase D precursor [Bacteroides thetaiotaomicron VPI-5482] Length = 333 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 112/312 (35%), Positives = 157/312 (50%), Gaps = 33/312 (10%) Query: 12 NPVIPGWYADPEA--RTYQGRHWIYATRSFTEYTQQMNLDAFSSVDLIHWNKHDSIIEM- 68 NP++PG++ADPE R++IY T FSS +L W + I+EM Sbjct: 30 NPILPGFHADPEVLYSHQTKRYYIYPTSDGFPGWGGSYFKVFSSKNLKTWKEETVILEMG 89 Query: 69 KDFPWIWRAVWAPT----QIEHQGRHYLVFASNDIQKDGEAGGLEIAVADSPEGPYRGYL 124 K+ W WAP +I+ + +++ +++N G+ G +AVADSP GP+ L Sbjct: 90 KNVSWANGNAWAPCIEEKKIDGKYKYFFYYSANPTTNKGKQIG--VAVADSPTGPFTD-L 146 Query: 125 GKPLIDRFIHG-AQPIDAHLFKDD-DGAVYLFYGGWGHCNVARMNEDMTGFVAFSDGQTV 182 GKP+I G Q ID +F D G YL++G G+ A +N+DM +T Sbjct: 147 GKPIITSSPTGRGQQIDVDVFTDPVSGKSYLYWGN-GYMAGAELNDDMLSI----KEETT 201 Query: 183 RSITPPG-------YVEGPCMIRKDGLYYLMWSMGGWTNGTYRVAYGVSASPLGPF--AN 233 +TP G Y E P +I + G+YY WS+ + Y V YG + SPLGP A Sbjct: 202 VVLTPKGGTLQTYAYREAPYVIYRKGIYYFFWSVDDTGSPNYHVVYGTAQSPLGPIEVAK 261 Query: 234 EGTILERQEPVAE--GPGHHGYLHLPDEDEWLIVYHR---RIIGDKEPGNRVLCIDRMEF 288 E +L Q P E GP H+ L +P +D+W IVYHR + D +R +CIDRMEF Sbjct: 262 EPIVL-IQNPKEEIYGPAHNSILQVPGKDKWYIVYHRINKNHLNDGPGWHREVCIDRMEF 320 Query: 289 EA-GRIKPVIMT 299 G IK VI T Sbjct: 321 NPDGTIKQVIPT 332 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.321 0.141 0.470 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 538,353,761 Number of extensions: 24796479 Number of successful extensions: 39951 Number of sequences better than 1.0e-05: 88 Number of HSP's gapped: 39795 Number of HSP's successfully gapped: 90 Length of query: 302 Length of database: 757,237,578 Length adjustment: 125 Effective length of query: 177 Effective length of database: 417,850,203 Effective search space: 73959485931 Effective search space used: 73959485931 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 125 (52.8 bits)