BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0437.0013.p (150 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00129078.1| COG0454: Histone acetyltransferase HPA2 and r... 140 7e-33 ref|ZP_00047290.1| COG0454: Histone acetyltransferase HPA2 and r... 139 3e-32 gb|EAI75470.1| unknown [environmental sequence] 136 1e-31 ref|NP_930728.1| hypothetical protein [Photorhabdus luminescens ... 132 2e-30 ref|NP_743352.1| acetyltransferase, GNAT family [Pseudomonas put... 132 3e-30 >ref|ZP_00129078.1| COG0454: Histone acetyltransferase HPA2 and related acetyltransferases [Desulfovibrio desulfuricans G20] Length = 170 Score = 140 bits (354), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 72/150 (48%), Positives = 93/150 (62%), Gaps = 5/150 (3%) Query: 3 HMNPIHRITDRNEEVSHQLLYIWETAVRATHLFLTEQNIAALSPLVIQGIRQIPHLLAYT 62 H + I +E ++L +WE +VRATH FLTE NI PL+++ +P + Y Sbjct: 21 HAGVVMNIVAAAQEDYPEILAVWEASVRATHDFLTEDNIQFFKPLILK--EYLPAVDLYC 78 Query: 63 DSDHYL---GFIGVQDTKIEMLFVNPAVRGRGIGKQLVTYAIQTLNVLYVDVNEQNPQAI 119 D GF+GV + IEMLF+ P RGRG+GK LV +A+ L + VDVNEQNP A Sbjct: 79 AKDETGRIHGFLGVAEQNIEMLFLAPESRGRGLGKLLVNFAVAELGSVRVDVNEQNPSAA 138 Query: 120 GFYEHLGFRVFDRSERDEQGQPFPILHMKL 149 GFYEH+GF V RS D QGQPFP+LHM+L Sbjct: 139 GFYEHMGFTVVRRSSVDGQGQPFPLLHMEL 168 >ref|ZP_00047290.1| COG0454: Histone acetyltransferase HPA2 and related acetyltransferases [Lactobacillus gasseri] Length = 141 Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 67/142 (47%), Positives = 92/142 (64%), Gaps = 5/142 (3%) Query: 7 IHRITDRNEEVSHQLLYIWETAVRATHLFLTEQNIAALSPLVIQGIRQIPHLLAYTDSDH 66 I +I ++E ++LL IWE +VRATH FL++ I + V +R + HL+ D + Sbjct: 3 ILKINALDQETENKLLVIWEISVRATHNFLSDPEINNIKKYVPHALRGVSHLIVAYDENE 62 Query: 67 YLGFIGVQDTKIEMLFVNPAVRGRGIGKQLVTYAIQTLNVLYVDVNEQNPQAIGFYEHLG 126 + F+G+ D K+EMLFV+ RG GIGK L+TY I L D+NEQNP A GFYEH+G Sbjct: 63 PVAFMGINDQKLEMLFVDANQRGNGIGKALITYGIDNL-----DINEQNPGARGFYEHMG 117 Query: 127 FRVFDRSERDEQGQPFPILHMK 148 F+ +RSE D+QG P+PIL MK Sbjct: 118 FKAVERSEFDDQGNPYPILVMK 139 >gb|EAI75470.1| unknown [environmental sequence] Length = 147 Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 68/131 (51%), Positives = 87/131 (66%), Gaps = 1/131 (0%) Query: 21 LLYIWETAVRATHLFLTEQNIAALSPLVI-QGIRQIPHLLAYTDSDHYLGFIGVQDTKIE 79 L+ IWE AVRATH FL E ++ + PL+ Q + A +S LGF+G + +E Sbjct: 16 LVEIWEAAVRATHHFLPESDLQVIKPLLREQYFPSVQLTCARDESGRILGFLGTSEGMVE 75 Query: 80 MLFVNPAVRGRGIGKQLVTYAIQTLNVLYVDVNEQNPQAIGFYEHLGFRVFDRSERDEQG 139 MLFV+PA G+G+GK+L+ +AI L VDVNEQNPQA+GFY+HLGF V DRS D G Sbjct: 76 MLFVDPACHGQGVGKRLMRHAIDALGATRVDVNEQNPQAVGFYQHLGFVVTDRSRLDGGG 135 Query: 140 QPFPILHMKLS 150 +PFPILHM L Sbjct: 136 RPFPILHMTLK 146 >ref|NP_930728.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1] emb|CAE15884.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 153 Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 91/134 (67%), Gaps = 5/134 (3%) Query: 19 HQLLYIWETAVRATHLFLTEQNIAALSPLVIQGIRQIPHLLAY---TDSDHYLGFIGVQD 75 ++L+ IWE +VRATH FL++++I L PL++ +P L Y D GFI V Sbjct: 14 NKLIEIWEASVRATHDFLSDEHINQLRPLILH--TYLPMLTVYKAINDKHEIEGFISVDQ 71 Query: 76 TKIEMLFVNPAVRGRGIGKQLVTYAIQTLNVLYVDVNEQNPQAIGFYEHLGFRVFDRSER 135 ++EMLF++ RG+GIGK L+ +AI L + +DVNEQN Q +GFY+HLGF VF+RSE Sbjct: 72 HRVEMLFISLDSRGKGIGKTLLNFAISKLGINELDVNEQNVQGVGFYQHLGFEVFNRSEI 131 Query: 136 DEQGQPFPILHMKL 149 D QG PFP+LHM++ Sbjct: 132 DGQGNPFPLLHMRI 145 >ref|NP_743352.1| acetyltransferase, GNAT family [Pseudomonas putida KT2440] gb|AAN66816.1| acetyltransferase, GNAT family [Pseudomonas putida KT2440] Length = 162 Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 67/141 (47%), Positives = 89/141 (63%), Gaps = 5/141 (3%) Query: 9 RITDRNEEVSHQLLYIWETAVRATHLFLTEQNIAALSPLVIQGIRQIPHLLAYTDSDHYL 68 R+ D +E L+ +WE +VRATH FL E I L V++ L+ D Sbjct: 22 RLCDYSE-----LVQVWEDSVRATHDFLPEGYILLLREHVLRRYLDAVMLVCCKDRQRIC 76 Query: 69 GFIGVQDTKIEMLFVNPAVRGRGIGKQLVTYAIQTLNVLYVDVNEQNPQAIGFYEHLGFR 128 GF GV + +++MLFV P RG+G+GK+L+ YAI LN Y+DVNEQNP+A+GFY H GF Sbjct: 77 GFAGVANGRVDMLFVAPGYRGQGVGKRLLRYAISELNAEYLDVNEQNPKALGFYLHEGFE 136 Query: 129 VFDRSERDEQGQPFPILHMKL 149 V RSE D GQP+P+LHM+L Sbjct: 137 VIGRSETDGLGQPYPLLHMRL 157 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.324 0.140 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 217,980,291 Number of extensions: 7966005 Number of successful extensions: 17267 Number of sequences better than 1.0e-05: 58 Number of HSP's gapped: 17326 Number of HSP's successfully gapped: 59 Length of query: 150 Length of database: 757,237,578 Length adjustment: 109 Effective length of query: 41 Effective length of database: 461,291,787 Effective search space: 18912963267 Effective search space used: 18912963267 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 120 (50.8 bits)