BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0430.0010.p (1310 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00077673.1| COG3209: Rhs family protein [Methanosarcina b... 397 e-109 ref|ZP_00087432.1| COG3209: Rhs family protein [Pseudomonas fluo... 214 9e-54 ref|ZP_00060809.1| COG3209: Rhs family protein [Clostridium ther... 194 9e-48 ref|NP_901101.1| probable Rhs-family protein [Chromobacterium vi... 192 7e-47 ref|NP_900908.1| probable rhs-related protein [Chromobacterium v... 179 4e-43 >ref|ZP_00077673.1| COG3209: Rhs family protein [Methanosarcina barkeri] Length = 1970 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 281/787 (35%), Positives = 387/787 (49%), Gaps = 101/787 (12%) Query: 2 NRPVEEIDALGNRATYEYDTAGNLVKSTDALG---------------------GVVTIAR 40 N + + D L ++ ++EYD NL+KS DALG T + Sbjct: 973 NNLISQTDELRHKTSFEYDDNSNLIKSIDALGHETVFSYDKYGQVIGETDSNKKTATFSY 1032 Query: 41 DSAGVPVSVTDAEGHTTAYTNDADGFAK---------------------EIKDPSGYTTI 79 ++ G +++TDA G T+A+T D G I DP G TT Sbjct: 1033 NNNGDQITITDANGKTSAFTYDTVGRVTTKTDAKGNRYTFQYDALDNLLSITDPMGQTTS 1092 Query: 80 IERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTSSVTYDANGNPVEHTNEAGS 139 + D TDAEG+L YD ++ V VTNA+ YDA GN V T+ G Sbjct: 1093 NKYDAAGNKISFTDAEGRLTKYSYDSLNQLVKVTNAMGGVVRYKYDAVGNLVSTTDAKGH 1152 Query: 140 KTVSNYQ-VYRLSSTEDALQNSTTKTYDALGRVIEAKDEAGAVTAYNYDSVGQLEEVTDA 198 KT +Y + R S +AL +T YDA+G I + G T Y+Y+S+ QL +VT+A Sbjct: 1153 KTSYDYDPLNRQVSVTNALGKTTRNKYDAIGNKISITNAYGKSTRYSYNSLNQLVKVTNA 1212 Query: 199 EGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELLSVTDPLGAKTRYRYDAAGNTIKE 258 G+ Y YD GN+++ D G+ +Y Y N +SVTD L TR +YDA GN I Sbjct: 1213 MGKVVRYNYDAVGNLISTTDENGHKINYGYDSLNRQVSVTDALRKTTRNKYDAVGNKISI 1272 Query: 259 TDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDPNHSIWTTKYDSRSLD 318 T+A G ST Y YN+L QLVKVTDA+G V Y YD GN ++ D N Sbjct: 1273 TNAYGKSTRYSYNSLNQLVKVTDAMGGVVRYNYDAVGNLISTTDAN-------------- 1318 Query: 319 AGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTRVRNALGYETIYAYDAQ 378 G+KT Y YD+L R + NALG T YDA Sbjct: 1319 ----------------------------GRKTNYGYDSLNRQVSITNALGKTTRNKYDAV 1350 Query: 379 GNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGNLLDKTNALGAVTSYRY 438 GN +AN T ++YD L RL +V +A G +Y+YDA GNL+ T+A G T Y Y Sbjct: 1351 GNKISSTDANWRLTKYSYDSLNRLVKVTDAMGGVVRYTYDAVGNLISTTDAKGHKTDYGY 1410 Query: 439 DTLNRVIESVNPLQEITSLAYDENGNLQKVTEPDSNTTVYAYNKGNQVEQIQYGNDLTVK 498 D+L+R + +PL YD GN T+ D TT Y Y+ N++ ++ Y +D V Sbjct: 1411 DSLDRQVSITDPLGRTARNKYDAVGNKISSTDEDGKTTSYGYDVLNRLTKVSYPDDQKVS 1470 Query: 499 YKYDLAGRRSLMTDSTGDTRYTYDALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDNTV 558 Y YD G R M DS G T Y YD LNR SV++P G V Y + G R ++ YPD Sbjct: 1471 YNYDAVGNRLTMKDSHGTTAYKYDKLNRLLSVLNPDGQKVSYTYNKVGNRVKMTYPDGKT 1530 Query: 559 VSYDYDKLDRIKQVTDAQNGITSYLYDAAGRLKEKLLPNKGQSTYSYDGAGQLLEM--KH 616 SY YD ++R+ V D+ ITSY Y G LK PN ++ YSYD A +L+E+ K+ Sbjct: 1531 TSYSYDAVNRLIGVIDSDGHITSYSYAKNGNLKTMNTPNGVKTEYSYDKANRLVELINKN 1590 Query: 617 TAPGGALLEQLTYVYDPAGNKIRSERQ--EGGSDEDNPAGTPRPADIADYAYDALNQLVQ 674 T ++ Y D AGN+++ + Q EG D+ + Y YD L +L + Sbjct: 1591 TT---QVVSSYKYTLDAAGNRLKVDEQLAEGVESGDSELKESQLL-TTTYGYDKLYRLTK 1646 Query: 675 VQKQNGSRVVYSYDTVGNRLGKETT--GAGTTIKELYTYDAANKLTHFEKGSDYKDYTYD 732 V + V Y YD++GNR+ T G G+TI Y YDAA++L + G+ Y+YD Sbjct: 1647 VDYPSNKTVSYKYDSMGNRISMTTNVDGIGSTIS--YKYDAADQL--LQSGN--ISYSYD 1700 Query: 733 KRGNLLE 739 K+GNL++ Sbjct: 1701 KKGNLIK 1707 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 237/786 (30%), Positives = 361/786 (45%), Gaps = 72/786 (9%) Query: 3 RPVEEIDALGNRATYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYTND 62 + V +D GN+ + Y T L K TDA G + +A D G +S+TD G +Y+ D Sbjct: 764 KLVNIVDKNGNQINFTY-TGEQLTKVTDASGRELILAYDHNGHIISITDPMGRVWSYSYD 822 Query: 63 ADGFAKEIKDPSGYTTIIERDTLHRTTKITDAEGKLQAVD-YDQKDRAVAVTNALDQTSS 121 G + K+P G D H T ITD G + YD+K ++ +N+L+ T + Sbjct: 823 DQGNLIQCKNPIGGKLSYTYDENHWMTSITDPRGNHPMKNTYDEKGHVISQSNSLNATYT 882 Query: 122 VTYDANGNPVEHTNEAGSKTVSNY--QVYRLSSTEDALQNSTTKTYDALGRVIEAKDEAG 179 YD+ T+ G ++ + L+ T + L + + YD G I +E Sbjct: 883 FNYDSENRKTTETDPFGKNKTYSFDEHFWELNET-NQLGYTISYAYDENGNRISVTNENS 941 Query: 180 AVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELLSVTD 239 T YD+ G + + T+ G S + TYD N+++Q D + TS+ Y + L+ D Sbjct: 942 KTTKLAYDANGNIIKTTNPLGYSKSMTYDSKNNLISQTDELRHKTSFEYDDNSNLIKSID 1001 Query: 240 PLGAKTRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGNQVA 299 LG +T + YD G I ETD+ + + YN G + +TDA G + + YD G Sbjct: 1002 ALGHETVFSYDKYGQVIGETDSNKKTATFSYNNNGDQITITDANGKTSAFTYDTVGRVTT 1061 Query: 300 VIDPNHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGR 359 D + +T +YD+ +P+ + T+ +A G F DA G+ T Y YD+L + Sbjct: 1062 KTDAKGNRYTFQYDALDNLLSITDPMGQTTSNKYDAAGNKISFTDAEGRLTKYSYDSLNQ 1121 Query: 360 NTRVRNALGYETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDA 419 +V NA+G Y YDA GN+ +A H+T++ YDPL R V NA G TT+ YDA Sbjct: 1122 LVKVTNAMGGVVRYKYDAVGNLVSTTDAKGHKTSYDYDPLNRQVSVTNALGKTTRNKYDA 1181 Query: 420 SGNLLDKTNALGAVTSYRYDTLNRVIESVNPLQEITSLAYDENGNLQKVTEPDSN----- 474 GN + TNA G T Y Y++LN++++ N + ++ YD GNL T+ + + Sbjct: 1182 IGNKISITNAYGKSTRYSYNSLNQLVKVTNAMGKVVRYNYDAVGNLISTTDENGHKINYG 1241 Query: 475 -------------------------------------TTVYAYNKGNQVEQIQYGNDLTV 497 +T Y+YN NQ+ ++ V Sbjct: 1242 YDSLNRQVSVTDALRKTTRNKYDAVGNKISITNAYGKSTRYSYNSLNQLVKVTDAMGGVV 1301 Query: 498 KYKYDLAGRRSLMTDSTG-DTRYTYDALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDN 556 +Y YD G TD+ G T Y YD+LNR S+ + G R ++ A G + + Sbjct: 1302 RYNYDAVGNLISTTDANGRKTNYGYDSLNRQVSITNALGKTTRNKYDAVGNKISSTDANW 1361 Query: 557 TVVSYDYDKLDRIKQVTDAQNGITSYLYDAAGRLKEKLLPNKGQSTYSYDGAGQLLEMKH 616 + Y YD L+R+ +VTDA G+ Y YDA G L ++ Y YD + + + Sbjct: 1362 RLTKYSYDSLNRLVKVTDAMGGVVRYTYDAVGNLISTTDAKGHKTDYGYDSLDRQVSI-- 1419 Query: 617 TAPGGALLEQLTYVYDPAGNKIRSERQEGGSDEDNPAGTPRPADIADYAYDALNQLVQVQ 676 T P G YD GNKI S ++G + Y YD LN+L +V Sbjct: 1420 TDPLGRTARNK---YDAVGNKISSTDEDGKT--------------TSYGYDVLNRLTKVS 1462 Query: 677 KQNGSRVVYSYDTVGNRLGKETTGAGTTIKELYTYDAANKLTHFEKGSDYK-DYTYDKRG 735 + +V Y+YD VGNRL + + GTT Y YD N+L K YTY+K G Sbjct: 1463 YPDDQKVSYNYDAVGNRLTMKDS-HGTT---AYKYDKLNRLLSVLNPDGQKVSYTYNKVG 1518 Query: 736 NLLEVS 741 N ++++ Sbjct: 1519 NRVKMT 1524 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 243/760 (31%), Positives = 349/760 (45%), Gaps = 54/760 (7%) Query: 3 RPVEEIDALGNRATYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYTND 62 R + DA GNR T++YD NL+ TD +G + D+AG +S TDAEG T Y+ D Sbjct: 1058 RVTTKTDAKGNRYTFQYDALDNLLSITDPMGQTTSNKYDAAGNKISFTDAEGRLTKYSYD 1117 Query: 63 ADGFAKEIKDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTSSV 122 + ++ + G + D + TDA+G + DYD +R V+VTNAL +T+ Sbjct: 1118 SLNQLVKVTNAMGGVVRYKYDAVGNLVSTTDAKGHKTSYDYDPLNRQVSVTNALGKTTRN 1177 Query: 123 TYDANGNPVEHTNEAGSKTVSNYQ-VYRLSSTEDALQNSTTKTYDALGRVIEAKDEAGAV 181 YDA GN + TN G T +Y + +L +A+ YDA+G +I DE G Sbjct: 1178 KYDAIGNKISITNAYGKSTRYSYNSLNQLVKVTNAMGKVVRYNYDAVGNLISTTDENGHK 1237 Query: 182 TAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELLSVTDPL 241 Y YDS+ + VTDA ++ YD GN ++ +A G T Y+Y+ N+L+ VTD + Sbjct: 1238 INYGYDSLNRQVSVTDALRKTTRNKYDAVGNKISITNAYGKSTRYSYNSLNQLVKVTDAM 1297 Query: 242 GAKTRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVI 301 G RY YDA GN I TDA G T Y Y++L + V +T+ALG T +YD GN+++ Sbjct: 1298 GGVVRYNYDAVGNLISTTDANGRKTNYGYDSLNRQVSITNALGKTTRNKYDAVGNKISST 1357 Query: 302 DPNHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNT 361 D N + YDS + + + T +A G + DA G KT Y YD+L R Sbjct: 1358 DANWRLTKYSYDSLNRLVKVTDAMGGVVRYTYDAVGNLISTTDAKGHKTDYGYDSLDRQV 1417 Query: 362 RVRNALGYETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASG 421 + + LG YDA GN + + T++ YD L RLT+V + Y+YDA G Sbjct: 1418 SITDPLGRTARNKYDAVGNKISSTDEDGKTTSYGYDVLNRLTKVSYPDDQKVSYNYDAVG 1477 Query: 422 NLLDKTNALGAVTSYRYDTLNRVIESVNPLQEITSLAYDENGNLQKVTEPDSNTTVYAYN 481 N L ++ G T+Y+YD LNR++ +NP + S Y++ GN K+T PD TT Y+Y+ Sbjct: 1478 NRLTMKDSHGT-TAYKYDKLNRLLSVLNPDGQKVSYTYNKVGNRVKMTYPDGKTTSYSYD 1536 Query: 482 KGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTG-DTRYTYDALNRPTSVIDPRGNNV-- 538 N++ + + Y Y G M G T Y+YD NR +I+ V Sbjct: 1537 AVNRLIGVIDSDGHITSYSYAKNGNLKTMNTPNGVKTEYSYDKANRLVELINKNTTQVVS 1596 Query: 539 --RYEWTATGQR---------------SRIIYPDNTVVSYDYDKLDRIKQVTDAQNGITS 581 +Y A G R S + +Y YDKL R+ +V N S Sbjct: 1597 SYKYTLDAAGNRLKVDEQLAEGVESGDSELKESQLLTTTYGYDKLYRLTKVDYPSNKTVS 1656 Query: 582 YLYDAAGRLKEKLLPNKGQSTYSYDGAGQLLEMKHTAPGGALLE-QLTYVYDPAGNKIRS 640 Y YD+ G N+ T + DG G + K+ A L ++Y YD GN I+ Sbjct: 1657 YKYDSMG--------NRISMTTNVDGIGSTISYKYDAADQLLQSGNISYSYDKKGNLIKK 1708 Query: 641 ERQEGGSDEDNPAGTPRPADIADYAYDALNQLVQVQK------QNGSRVVYSYDTVGNRL 694 Y+YD N+L V + S + YD GNR+ Sbjct: 1709 RVNS--------------TQFMSYSYDEANRLKNVSEFVSNTNTPKSSYNFEYDGDGNRI 1754 Query: 695 GKETTGAGTTIKELYTYDAANKLTHFEKGSDYKD---YTY 731 K T Y D + L SD K+ YTY Sbjct: 1755 IKTTINGENAQSTKYVLDINSALPQVLTESDTKNTTCYTY 1794 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 197/680 (28%), Positives = 305/680 (44%), Gaps = 67/680 (9%) Query: 47 VSVTDAEGHTTAYTNDADG--------FAKEIKDPSGYTTIIERDTLHRTTKITDAEGKL 98 V+V +GHT Y + DG F IK+ T+ ++D +T +EGKL Sbjct: 709 VTVLGGDGHTDTYILNPDGTYSRPLSVFDDLIKNSDETYTLTKKD---QTKYNFSSEGKL 765 Query: 99 QAVDYDQKDRAVAVTNALDQTSSVTYDANGNPVEHTNEAGSKTVSNYQVYRLSSTEDALQ 158 + D NGN + T Y +L+ DA Sbjct: 766 VNI----------------------VDKNGNQINFT----------YTGEQLTKVTDASG 793 Query: 159 NSTTKTYDALGRVIEAKDEAGAVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKD 218 YD G +I D G V +Y+YD G L + + G +YTYD+N M + D Sbjct: 794 RELILAYDHNGHIISITDPMGRVWSYSYDDQGNLIQCKNPIGGKLSYTYDENHWMTSITD 853 Query: 219 AKGNI-TSYTYSKRNELLSVTDPLGAKTRYRYDAAGNTIKETDALGNSTYYDYNALGQLV 277 +GN TY ++ ++S ++ L A + YD+ ETD G + Y ++ + Sbjct: 854 PRGNHPMKNTYDEKGHVISQSNSLNATYTFNYDSENRKTTETDPFGKNKTYSFDEHFWEL 913 Query: 278 KVTDALGAVTEYQYDKNGNQVAVIDPNHSIWTTKYDSRSLDAGTINPLKEETAVTRNARG 337 T+ LG Y YD+NGN+++V + N YD+ T NPL ++T +++ Sbjct: 914 NETNQLGYTISYAYDENGNRISVTNENSKTTKLAYDANGNIIKTTNPLGYSKSMTYDSKN 973 Query: 338 LMTEFLDAAGQKTTYEYDALGRNTRVRNALGYETIYAYDAQGNVEKIVNANHHETAFTYD 397 + D KT++EYD + +ALG+ET+++YD G V ++N F+Y+ Sbjct: 974 NLISQTDELRHKTSFEYDDNSNLIKSIDALGHETVFSYDKYGQVIGETDSNKKTATFSYN 1033 Query: 398 PLGRLTEVKNAEGSTTKYSYDASGNLLDKTNALGAVTSYRYDTLNRVIESVNPLQEITSL 457 G + +A G T+ ++YD G + KT+A G +++YD L+ ++ +P+ + TS Sbjct: 1034 NNGDQITITDANGKTSAFTYDTVGRVTTKTDAKGNRYTFQYDALDNLLSITDPMGQTTSN 1093 Query: 458 AYDENGNLQKVTEPDSNTTVYAYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGD- 516 YD GN T+ + T Y+Y+ NQ+ ++ V+YKYD G TD+ G Sbjct: 1094 KYDAAGNKISFTDAEGRLTKYSYDSLNQLVKVTNAMGGVVRYKYDAVGNLVSTTDAKGHK 1153 Query: 517 TRYTYDALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQ 576 T Y YD LNR SV + G R ++ A G + I Y Y+ L+++ +VT+A Sbjct: 1154 TSYDYDPLNRQVSVTNALGKTTRNKYDAIGNKISITNAYGKSTRYSYNSLNQLVKVTNAM 1213 Query: 577 NGITSYLYDAAGRLKEKLLPNKGQSTYSYDGAGQLLEMKHTAPGGALLEQLTYVYDPAGN 636 + Y YDA G L N + Y YD + + + AL + YD GN Sbjct: 1214 GKVVRYNYDAVGNLISTTDENGHKINYGYDSLNRQVSVTD-----ALRKTTRNKYDAVGN 1268 Query: 637 KIRSERQEGGSDEDNPAGTPRPADIADYAYDALNQLVQVQKQNGSRVVYSYDTVGNRLGK 696 KI G S Y+Y++LNQLV+V G V Y+YD VGN + Sbjct: 1269 KISITNAYGKSTR--------------YSYNSLNQLVKVTDAMGGVVRYNYDAVGNLI-- 1312 Query: 697 ETTGAGTTIKELYTYDAANK 716 TT A K Y YD+ N+ Sbjct: 1313 STTDANGR-KTNYGYDSLNR 1331 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 182/628 (28%), Positives = 256/628 (40%), Gaps = 122/628 (19%) Query: 1 MNRPVEEIDALGNRATYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYT 60 +N+ V+ DA+G Y YD GNL+ +TDA G DS VS+T+A G TT Sbjct: 1287 LNQLVKVTDAMGGVVRYNYDAVGNLISTTDANGRKTNYGYDSLNRQVSITNALGKTTRNK 1346 Query: 61 NDADGFAKEIKDPSGYTTIIERDTLHRTTKITDAEG-------------------KLQAV 101 DA G D + T D+L+R K+TDA G K Sbjct: 1347 YDAVGNKISSTDANWRLTKYSYDSLNRLVKVTDAMGGVVRYTYDAVGNLISTTDAKGHKT 1406 Query: 102 DY--DQKDRAVAVTNALDQTSSVTYDANGNPVEHTNEAGSKTVSNYQVY-RLSSTEDALQ 158 DY D DR V++T+ L +T+ YDA GN + T+E G T Y V RL+ Sbjct: 1407 DYGYDSLDRQVSITDPLGRTARNKYDAVGNKISSTDEDGKTTSYGYDVLNRLTKVSYPDD 1466 Query: 159 NSTTKTYDALGRVIEAKDEAGAVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGN------ 212 + YDA+G + KD G TAY YD + +L V + +GQ +YTY+ GN Sbjct: 1467 QKVSYNYDAVGNRLTMKDSHGT-TAYKYDKLNRLLSVLNPDGQKVSYTYNKVGNRVKMTY 1525 Query: 213 ---------------MLTQKDAKGNITSYTYSKRNELLSVTDPLGAKTRYRYDAAGNTI- 256 ++ D+ G+ITSY+Y+K L ++ P G KT Y YD A + Sbjct: 1526 PDGKTTSYSYDAVNRLIGVIDSDGHITSYSYAKNGNLKTMNTPNGVKTEYSYDKANRLVE 1585 Query: 257 ---KETDALGNSTYYDYNALGQLVKVTDALG---------------AVTEYQYDKNGNQV 298 K T + +S Y +A G +KV + L T Y YDK Sbjct: 1586 LINKNTTQVVSSYKYTLDAAGNRLKVDEQLAEGVESGDSELKESQLLTTTYGYDKLYRLT 1645 Query: 299 AVIDPNHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALG 358 V P++ + KYDS R MT +D G +Y+YDA Sbjct: 1646 KVDYPSNKTVSYKYDSMG------------------NRISMTTNVDGIGSTISYKYDAAD 1687 Query: 359 RNTRVRNALGYETIYAYDAQGN-VEKIVNANHHETAFTYDPLGRLTEVK------NAEGS 411 + + N Y+YD +GN ++K VN+ +++YD RL V N S Sbjct: 1688 QLLQSGNIS-----YSYDKKGNLIKKRVNSTQF-MSYSYDEANRLKNVSEFVSNTNTPKS 1741 Query: 412 TTKYSYDASGNLLDKTNALG---AVTSYRYDTLNRVIESVNPLQEITSLAYDENGNLQKV 468 + + YD GN + KT G T Y D I S P Q + Sbjct: 1742 SYNFEYDGDGNRIIKTTINGENAQSTKYVLD-----INSALP---------------QVL 1781 Query: 469 TEPDS-NTTVYAYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGDTR--YTYDALN 525 TE D+ NTT Y Y G + + + Y YD G ++DS G + Y YDA Sbjct: 1782 TESDTKNTTCYTY--GTDLISMTNSENAEYYYHYDGLGSVRSLSDSKGIIKNTYLYDAFG 1839 Query: 526 RPTSVIDPRGNNVRYEWTATGQRSRIIY 553 + I N R+ + +IY Sbjct: 1840 QVQKEIGTVDNEFRFTGEQMDDETGLIY 1867 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/252 (27%), Positives = 105/252 (41%), Gaps = 59/252 (23%) Query: 890 ESNRWDASNRLIKNTNTYGDITTYQYDGDGNRVSMRTTLGDGAVQDAYLPGNPAGTRDGW 949 E+NR + + NTNT ++YDGDGNR+ ++TT+ +G Sbjct: 1722 EANRLKNVSEFVSNTNTPKSSYNFEYDGDGNRI-IKTTI------------------NGE 1762 Query: 950 EPQFKKRQLELYFTNDITMSIPQPLMATGAAGQNWKQSYVYGAGEERISMSYLVSGDKSN 1009 Q K L DI ++PQ L + + K + Y G + ISM+ S Sbjct: 1763 NAQSTKYVL------DINSALPQVLTES-----DTKNTTCYTYGTDLISMT------NSE 1805 Query: 1010 DWEPXXXXXXXXXXXXTPKTLFYLSDAQGSVIGLEGQDGSMSARYRYDEFGVAEAPEKFD 1069 + E +Y D GSV L G + Y YD FG + Sbjct: 1806 NAE-----------------YYYHYDGLGSVRSLSDSKGIIKNTYLYDAFGQVQKE---- 1844 Query: 1070 LNWSGPDNLFGYTSLGYDYYSGYSHAQARDFDSSIGRFISEDTYEGQLIDPLSLNLYAYV 1129 DN F +T D +G + +AR +D S+GRFI++D +G+ + S+N Y Y Sbjct: 1845 --IGTVDNEFRFTGEQMDDETGLIYLRARYYDPSVGRFITKDVIKGRRVTTQSINRYVYT 1902 Query: 1130 KNNPLRYTDPSG 1141 NNP+ D +G Sbjct: 1903 TNNPVNLVDLTG 1914 >ref|ZP_00087432.1| COG3209: Rhs family protein [Pseudomonas fluorescens PfO-1] Length = 1573 Score = 214 bits (546), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 208/748 (27%), Positives = 316/748 (42%), Gaps = 95/748 (12%) Query: 15 ATYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYTNDADG----FAKEI 70 Y YD G+LV++ D G S + TD G DG +E Sbjct: 543 CAYHYDALGDLVQARDENGYAWNYEFRSHLI-TRYTDRTGRGMNLQWQGDGSDAKAIREW 601 Query: 71 KDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTSSVTYDANGNP 130 D + T +E D R T +TDA G YD + + +++ + D N Sbjct: 602 ADDGSFDTRLEWDENIRLTYVTDAHGNETWHYYDILGYTYRIRHPDERSEWLFRDEAKNV 661 Query: 131 VEHTNEAGSKTVSNYQVYRLSSTEDALQNSTTKTYDALGRVIEAKDEAGAVTAYNYDSVG 190 V H + GS V R S YD G ++E V Y YD + Sbjct: 662 VRHVHTDGS-------VDRFS-------------YDERGNLLEHIRADNTVMHYAYDDLD 701 Query: 191 QLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELLSVTDPLGAKTRYRYD 250 QL +V+DAEG T YDD+GN++ D GN T YTY+ +V D GA+ ++ Y+ Sbjct: 702 QLIKVSDAEGGQWTRAYDDSGNLVEAVDPLGNKTEYTYTSAGYPETVKDANGAEKKFEYN 761 Query: 251 AAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDPNHSIWTT 310 AG TD G ++ ++YN LGQL+ TDA G TEY+Y G V + P+ S Sbjct: 762 DAGQLTGYTDCSGKTSTWEYNGLGQLICFTDAAGQSTEYEY-VAGQLVLIRHPDKSEERF 820 Query: 311 KYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTRVRNALGYE 370 D+ ++ L T +A GL+ E +DAA Q Y +D LGR T Sbjct: 821 SRDAEGRLLAHVDGLNRCTTWNYSAAGLIAERVDAAEQTLRYRWDRLGRLT--------- 871 Query: 371 TIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDA-SGNLLDKTNA 429 + N N F YDP+GRL E +G T+Y YD SG L K + Sbjct: 872 ------------ALENENERSAHFHYDPMGRLLEETGFDGHITRYQYDTESGRLSSKLDG 919 Query: 430 LGAVTSYRYDTLNRVIESVNPLQEIT---SLAYDENGNLQKVTEPDSNTTVYAYNKGNQV 486 V ++++D + R+IE + L E + AYD NGN+ S + GN + Sbjct: 920 ERRV-AFQFDLMGRLIERLASLGEQVQSETFAYDGNGNMTLAENDHSRLQWFHDPAGNLL 978 Query: 487 EQIQYGNDLTVKYKYDLAGRRSLMTDSTGDTRYTYDALNRPTSVIDPRGNNVRYEWTATG 546 + Q+ SL ++ YDALN+ + + P G V + +G Sbjct: 979 REHQH--------------YLSLEQPRIAVWQHEYDALNQRVATVRPDGQRVSWMTYGSG 1024 Query: 547 QRSRIIYPDNTVVSYDYDKLDRIKQVTDAQNGITSYLYDAAGRLKEKLLPNKG------Q 600 + D+ +++++ D L R + + + +D AG+L+E+LL + Sbjct: 1025 HLLGLKVDDHELLAWERDDLHREIARHQGNHLLQTQKWDPAGQLQEQLLGRSDDKRTLLK 1084 Query: 601 STYSYDGAGQLLEMKHTAPGGALLEQLTYVYDPAGNKIRSERQEG---------GSDEDN 651 Y YD AGQL+ + T G LTY YDP G I++ ++G G+ D Sbjct: 1085 REYQYDPAGQLILLNDTRRG-----PLTYQYDPVGRLIKAASRQGVETFAFDPAGNLLDE 1139 Query: 652 PA-GTPRPADIADYAYDALNQLVQVQKQNGSRVVYSYDTVGNRLGKETTGAGTTIKELYT 710 P RP D ++ L++ + +G+ Y YD GN + + G+ ++ Sbjct: 1140 PVEQMRRPLDQDPMRSKRVDNLLR--EYSGTH--YEYDDRGNLIQRWHNGSIARMR---- 1191 Query: 711 YDAANKLTHFEKGSDYKDYTYDKRGNLL 738 +D ++L HF+ +Y YD G L Sbjct: 1192 WDLFDRLVHFDDARLEVEYAYDVLGRRL 1219 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 143/540 (26%), Positives = 230/540 (42%), Gaps = 54/540 (10%) Query: 1 MNRPVEEIDALGNRATYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYT 60 +++ ++ DA G + T YD +GNLV++ D LG SAG P +V DA G + Sbjct: 700 LDQLIKVSDAEGGQWTRAYDDSGNLVEAVDPLGNKTEYTYTSAGYPETVKDANGAEKKFE 759 Query: 61 NDADGFAKEIKDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTS 120 + G D SG T+ E + L + TDA G Q+ +Y+ + + D++ Sbjct: 760 YNDAGQLTGYTDCSGKTSTWEYNGLGQLICFTDAAG--QSTEYEYVAGQLVLIRHPDKSE 817 Query: 121 S-VTYDANGNPVEHTNEAGSKTVSNYQVYRLSSTE-DALQNSTTKTYDALGRVIEAKDEA 178 + DA G + H + T NY L + DA + + +D LGR+ ++E Sbjct: 818 ERFSRDAEGRLLAHVDGLNRCTTWNYSAAGLIAERVDAAEQTLRYRWDRLGRLTALENEN 877 Query: 179 GAVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELLSVT 238 ++YD +G+L E T +G Y YD L+ K ++ + L+ Sbjct: 878 ERSAHFHYDPMGRLLEETGFDGHITRYQYDTESGRLSSKLDGERRVAFQFDLMGRLIERL 937 Query: 239 DPLGAKTR---YRYDAAGN-TIKETDALGNSTYYDYNALGQLVK-------VTDALGAVT 287 LG + + + YD GN T+ E D ++D G L++ + AV Sbjct: 938 ASLGEQVQSETFAYDGNGNMTLAENDHSRLQWFHD--PAGNLLREHQHYLSLEQPRIAVW 995 Query: 288 EYQYDKNGNQVAVIDPN--HSIWTT---------KYDSRSLDAGTINPLKEETAVTRNAR 336 +++YD +VA + P+ W T K D L A + L E A + Sbjct: 996 QHEYDALNQRVATVRPDGQRVSWMTYGSGHLLGLKVDDHELLAWERDDLHREIARHQGNH 1055 Query: 337 GLMTEFLDAAGQKTTYEYDALGRNTRVRNALGYETIYAYDAQGNVEKIVNANHHETAFTY 396 L T+ D AGQ + LGR+ R L E Y YD G + + + + Y Sbjct: 1056 LLQTQKWDPAGQ---LQEQLLGRSDDKRTLLKRE--YQYDPAGQLILLNDTRRGPLTYQY 1110 Query: 397 DPLGRLTEVKNAEGSTTKYSYDASGNLLD-------KTNALGAVTSYRYDTLNRVIESVN 449 DP+GRL + + +G T +++D +GNLLD + + S R D L R Sbjct: 1111 DPVGRLIKAASRQGVET-FAFDPAGNLLDEPVEQMRRPLDQDPMRSKRVDNLLREYSG-- 1167 Query: 450 PLQEITSLAYDENGNLQKVTEPDSNTTVYAYNKGNQVEQIQYGND--LTVKYKYDLAGRR 507 T YD+ GNL + S A + + +++ + +D L V+Y YD+ GRR Sbjct: 1168 -----THYEYDDRGNLIQRWHNGS----IARMRWDLFDRLVHFDDARLEVEYAYDVLGRR 1218 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 115/459 (25%), Positives = 183/459 (39%), Gaps = 89/459 (19%) Query: 348 QKTTYEYDALGRNTRVRNALGY-------------------------------------- 369 Q Y YDALG + R+ GY Sbjct: 541 QLCAYHYDALGDLVQARDENGYAWNYEFRSHLITRYTDRTGRGMNLQWQGDGSDAKAIRE 600 Query: 370 -------ETIYAYDAQGNVEKIVNANHHETAFTYDPLG---RLT------------EVKN 407 +T +D + + +A+ +ET YD LG R+ E KN Sbjct: 601 WADDGSFDTRLEWDENIRLTYVTDAHGNETWHYYDILGYTYRIRHPDERSEWLFRDEAKN 660 Query: 408 A------EGSTTKYSYDASGNLLDKTNALGAVTSYRYDTLNRVIESVNPLQEITSLAYDE 461 +GS ++SYD GNLL+ A V Y YD L+++I+ + + AYD+ Sbjct: 661 VVRHVHTDGSVDRFSYDERGNLLEHIRADNTVMHYAYDDLDQLIKVSDAEGGQWTRAYDD 720 Query: 462 NGNLQKVTEPDSNTTVYAYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGDTR-YT 520 +GNL + +P N T Y Y E ++ N K++Y+ AG+ + TD +G T + Sbjct: 721 SGNLVEAVDPLGNKTEYTYTSAGYPETVKDANGAEKKFEYNDAGQLTGYTDCSGKTSTWE 780 Query: 521 YDALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQNGIT 580 Y+ L + D G + YE+ A GQ I +PD + + D R+ D N T Sbjct: 781 YNGLGQLICFTDAAGQSTEYEYVA-GQLVLIRHPDKSEERFSRDAEGRLLAHVDGLNRCT 839 Query: 581 SYLYDAAGRLKEKLLPNKGQSTYSYDGAGQLLEMKHTAPGGALLEQLTYVYDPAGNKIRS 640 ++ Y AAG + E++ + Y +D G+L +++ A + YDP G + Sbjct: 840 TWNYSAAGLIAERVDAAEQTLRYRWDRLGRLTALENENERSA-----HFHYDPMGRLL-- 892 Query: 641 ERQEGGSDEDNPAGTPRPADIADYAYDALNQLVQVQKQNGSRVVYSYDTVGNRLGKETTG 700 +E G D I Y YD + + + RV + +D +G RL + Sbjct: 893 --EETGFD----------GHITRYQYDTESGRLSSKLDGERRVAFQFDLMG-RLIERLAS 939 Query: 701 AGTTIK-ELYTYDAANKLTHFEKGSDYKDYTYDKRGNLL 738 G ++ E + YD +T E + +D GNLL Sbjct: 940 LGEQVQSETFAYDGNGNMTLAENDHSRLQWFHDPAGNLL 978 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 123/476 (25%), Positives = 186/476 (39%), Gaps = 96/476 (20%) Query: 326 KEETAVTRNARGLM--TEFLDAAGQKTTYEYDALGRNTRVRNALGYETIYAYDAQGNVEK 383 ++ET V R AR L+ E AG YE+ G + + L Y QG+V K Sbjct: 462 RKETYVRRGARFLLAGIELRSGAGIMLHYEH-MHGDEPVLSDLLTY--------QGDVTK 512 Query: 384 IVNANHHETAFTYDPLGRLT---EVKNA--EGSTTKYSYDASGNLLDKTNALGAVTSYRY 438 + H + D GRLT E+ + + Y YDA G+L+ + G +Y + Sbjct: 513 V----HLQLGTLIDDHGRLTGLWEIADGIPQRQLCAYHYDALGDLVQARDENGYAWNYEF 568 Query: 439 DT------LNRVIESVN-----------PLQEI-------TSLAYDENGNLQKVTEPDSN 474 + +R +N ++E T L +DEN L VT+ N Sbjct: 569 RSHLITRYTDRTGRGMNLQWQGDGSDAKAIREWADDGSFDTRLEWDENIRLTYVTDAHGN 628 Query: 475 TTVYAYNKGNQVEQIQYGNDLTVKYKYDLAGR--RSLMTDSTGDTRYTYDALNRPTSVID 532 T + Y+ +I++ ++ + D A R + TD + D R++YD Sbjct: 629 ETWHYYDILGYTYRIRHPDERSEWLFRDEAKNVVRHVHTDGSVD-RFSYDE--------- 678 Query: 533 PRGNNVRYEWTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQNGITSYLYDAAGRLKE 592 RGN + + I DNTV+ Y YD LD++ +V+DA+ G + YD +G L E Sbjct: 679 -RGNLLEH-----------IRADNTVMHYAYDDLDQLIKVSDAEGGQWTRAYDDSGNLVE 726 Query: 593 KLLPNKGQSTYSYDGAGQLLEMKHTAPGGALLE-----QLTYVYDPAGNKIRSERQEGGS 647 + P ++ Y+Y AG +K E QLT D +G E G Sbjct: 727 AVDPLGNKTEYTYTSAGYPETVKDANGAEKKFEYNDAGQLTGYTDCSGKTSTWEYNGLGQ 786 Query: 648 DEDNPAGTPRPADIADYAYDALNQLVQVQKQNGSRVVYSYDTVG---------NRLGKET 698 T +Y Y A QLV ++ + S +S D G NR Sbjct: 787 ---LICFTDAAGQSTEYEYVA-GQLVLIRHPDKSEERFSRDAEGRLLAHVDGLNRCTTWN 842 Query: 699 TGAGTTIKEL---------YTYDAANKLTHFEKGSDYK-DYTYDKRGNLLEVSGID 744 A I E Y +D +LT E ++ + YD G LLE +G D Sbjct: 843 YSAAGLIAERVDAAEQTLRYRWDRLGRLTALENENERSAHFHYDPMGRLLEETGFD 898 >ref|ZP_00060809.1| COG3209: Rhs family protein [Clostridium thermocellum ATCC 27405] Length = 1840 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 214/798 (26%), Positives = 321/798 (40%), Gaps = 109/798 (13%) Query: 1 MNRPVEEIDALGNR-ATYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAY 59 MNR + ID GN Y YD G +VK DA G + D E T Y Sbjct: 727 MNRLTQIIDPEGNVIKKYIYDEEGRIVKEIDA-----------KGYSSADNDEERWGTIY 775 Query: 60 TNDADGFAKEIKDP------SGYTTIIE--RDTLHRTTKITDAEGKLQAVDYDQKDRAVA 111 + G+ E + P Y IIE D R K + + +Y +K + Sbjct: 776 KYNLAGWLVEKRTPLRQKDGKIYYNIIEYVHDKNGRVVKEKRSPEYVTKSEYPKKWNVI- 834 Query: 112 VTNALDQTSSVTYDANGNPVEHTNEAGSKTVSNYQVYRLSSTE-----DALQNSTTKTYD 166 + YD NGN +E T+ G+ Y + E D Q T Y+ Sbjct: 835 ---------NYKYDPNGNLIEVTDGLGASITYEYDSLGKKTLEKMKINDKKQKVTRYVYN 885 Query: 167 ALGRVIEAKDEAG-------------AVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNM 213 ++GR+++ E A T YNYD G L EV EG + YDD Sbjct: 886 SVGRLVKVIQELDGEDLSGYSNEKVLAETIYNYDPNGNLIEVISPEGYLTVFKYDD---- 941 Query: 214 LTQKDAKGNITSYTYSKRNELLSVTDP----LGAKTR---YRYDAAGNTIKETDALGNST 266 A I S Y +N + + L K R Y YD AGN +K+ G Sbjct: 942 -----ANRRIKSILYQPQNGVKLIGSAYCALLNTKARSISYEYDRAGNLVKQILPNGGVI 996 Query: 267 YYDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDPNH-------SIWTT-KYDSRSLD 318 +Y+ + + +KVTD G T YD GN V ++P + + TT YDS + Sbjct: 997 INEYDEMNRKIKVTDPDGNTTRIFYDNTGNIVKYVEPGNYNPEKDDGVGTTYLYDSMNRL 1056 Query: 319 AGTINP--LKEETAVTRNARGLMTEFLDAAGQKTT----------YEYDALGRNTRVRNA 366 +N + E + N G + + +D+ G K+ + YD GR + Sbjct: 1057 IQIVNAAGIVVEKNIY-NTAGEIIKKIDSVGYKSADNDNDRHGVEFSYDLAGRLVEITTP 1115 Query: 367 LGY-----ETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASG 421 Y YDA+GN+ IV+ N + T ++ D G++ + +G+ KY YD +G Sbjct: 1116 EAKIHGRKSQQYTYDAEGNITGIVDGNGNSTRYSLDLWGKIINITEPDGTNIKYDYDYAG 1175 Query: 422 NLLDKTNALGAVTSYRYDTLNRVIESVNPLQEITSLAYDENGNLQKVTEPDSNTTVYAYN 481 NL+ T+ T Y Y++LN + E ++P YD G + + D ++T Y YN Sbjct: 1176 NLVSTTDGNRNTTRYTYNSLNLLSEIIDPDGRKIIFKYDRQGRMVQRIGKDGHSTYYTYN 1235 Query: 482 KGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGDTRYTYDALNRPTSVIDPRGNNVRYE 541 N + +Y+Y++ G + T YTY R S + Y+ Sbjct: 1236 ADNNITGCWEEEGQMERYEYNIDGSLAASISGTTIHTYTYTLAGRLKSKTTNGRKVLEYD 1295 Query: 542 WTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQNGITSYLYDAAGRLKEKLLPNKGQS 601 + G SR++ T V Y YD L R+ +T+ Y Y+ + + L + + Sbjct: 1296 YNKNGFVSRLVDISGTPVEYTYDVLGRVAAITNGGKISAKYEYNIDNTIAQVLYGSGICA 1355 Query: 602 TYSYDGAGQLLEMKHTAPGGALLEQLTYVYDPAGNKIRSERQEGGSDEDNPAGTPRPADI 661 Y YD + + +T P G + Y YD GN I E E G + Sbjct: 1356 RYEYDLDKNITRLLNTDPTGKEMFVYKYAYDGNGNPILKE--ENGK-------------V 1400 Query: 662 ADYAYDALNQLVQVQKQNGSRVVYSYDTVGNRLGKETTGAGTTIKELYTYDAANKLTHFE 721 Y YDALN+L +V + ++YD GNRL +E I E Y YD N+L Sbjct: 1401 TAYGYDALNRLQEVIYPGNVKERFTYDANGNRLKREF----RDILEQYEYDNCNRLIQRI 1456 Query: 722 KGSDYKDYTYDKRGNLLE 739 K +Y YD++GNL++ Sbjct: 1457 KNGLVTEYEYDEKGNLIK 1474 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 220/847 (25%), Positives = 350/847 (41%), Gaps = 133/847 (15%) Query: 9 DALGNRATYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHT-TAYTNDADGFA 67 D G + Y+YD GNL + GG +T A D G+ +SVTD G+T T D +G Sbjct: 304 DHTGRKLKYKYDEKGNLTQVIYPDGGKITYAYDDVGL-ISVTDQNGNTYVQNTYDKNGRV 362 Query: 68 KEIKDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALD-QTSSVTYDA 126 + D IIE D +R + + V D V D TYD Sbjct: 363 IKQLDHQENELIIEYDDENRENTFKWLKSGITRVYKYNTDMLVTEVRYDDGSVQKYTYDE 422 Query: 127 NGNPVEHTNEAGSKTVSNY----QVYRLSSTEDALQNSTTKTYDALGRVIEAKDEAGAVT 182 N N T+ G+ T Y + ++S E T +YD GR+I+ G Sbjct: 423 NLNRNSETDRNGNTTCKKYDDKGNLIEVTSPE-PFCYKTKYSYDENGRLIKTVSPGGGEV 481 Query: 183 AYNYDSVGQLEEVTDAEGQSN----TYTYDDNGNMLTQKDAKGNITSYTYSKR--NELLS 236 + YD G L + T G + +YTYD G + + +DA+ NITS+ Y + N+ Sbjct: 482 TFEYDDRGNLLKRTLKNGSRSYSEWSYTYDQYGRITSSRDAENNITSFEYGEEDVNKPTL 541 Query: 237 VTDPLGAKTRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGN 296 + D +G RY +D G T G + Y+ ++ +TDA G + YDK GN Sbjct: 542 IKDAVGNTFRYEFDKVGRVTAITTGYG-TVRLRYDDCDRITHITDAEGNIIRLNYDKAGN 600 Query: 297 QVAVIDP--------NHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAA-- 346 +I P N + +T +YD+ TI+PL AV + G + ++ Sbjct: 601 MTKIIAPKQYAEKGENGAGYTFEYDAMDKLIKTIDPLGNVFAVKYDENGNKIKEINPNYY 660 Query: 347 ------GQKTTYEYDALGRNTRVRNALGYETIYAYDAQGNVEKIVNANHHE--------T 392 G Y+YD R G + YD QGN+ K ++ ++ Sbjct: 661 NSQKDDGIGIEYKYDTNHRRISTIFPDGSMSRTKYDPQGNIIKTISWKDYDKDLDDGPGM 720 Query: 393 AFTYDPLGRLTEVKNAEGSTT-KYSYDASGNLLDKTNALGAV----------TSYRYDTL 441 +TYD + RLT++ + EG+ KY YD G ++ + +A G T Y+Y+ Sbjct: 721 EYTYDEMNRLTQIIDPEGNVIKKYIYDEEGRIVKEIDAKGYSSADNDEERWGTIYKYNLA 780 Query: 442 NRVIESVNPLQE--------ITSLAYDENGNLQK-------VTEPDS----NTTVYAYNK 482 ++E PL++ I +D+NG + K VT+ + N Y Y+ Sbjct: 781 GWLVEKRTPLRQKDGKIYYNIIEYVHDKNGRVVKEKRSPEYVTKSEYPKKWNVINYKYDP 840 Query: 483 GNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGD-----TRYTYDALNRPTSVI-DPRGN 536 + ++ G ++ Y+YD G+++L D TRY Y+++ R VI + G Sbjct: 841 NGNLIEVTDGLGASITYEYDSLGKKTLEKMKINDKKQKVTRYVYNSVGRLVKVIQELDGE 900 Query: 537 NVR------------YEWTATGQRSRIIYPDNTVVSYDYDKLD-RIKQVT-DAQNGI--- 579 ++ Y + G +I P+ + + YD + RIK + QNG+ Sbjct: 901 DLSGYSNEKVLAETIYNYDPNGNLIEVISPEGYLTVFKYDDANRRIKSILYQPQNGVKLI 960 Query: 580 --------------TSYLYDAAGRLKEKLLPNKGQSTYSYDGAGQLLEMKHTAPGGALLE 625 SY YD AG L +++LPN G YD + ++K T P G Sbjct: 961 GSAYCALLNTKARSISYEYDRAGNLVKQILPNGGVIINEYDEMNR--KIKVTDPDGNTTR 1018 Query: 626 QLTYVYDPAGNKIR-SERQEGGSDEDNPAGTPRPADIADYAYDALNQLVQVQKQNGSRVV 684 YD GN ++ E ++D+ GT Y YD++N+L+Q+ G V Sbjct: 1019 IF---YDNTGNIVKYVEPGNYNPEKDDGVGTT-------YLYDSMNRLIQIVNAAGIVVE 1068 Query: 685 YS-YDTVGNRLGK-ETTGAGTTIKE------LYTYDAANKLTHFE------KGSDYKDYT 730 + Y+T G + K ++ G + + ++YD A +L G + YT Sbjct: 1069 KNIYNTAGEIIKKIDSVGYKSADNDNDRHGVEFSYDLAGRLVEITTPEAKIHGRKSQQYT 1128 Query: 731 YDKRGNL 737 YD GN+ Sbjct: 1129 YDAEGNI 1135 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 178/639 (27%), Positives = 287/639 (44%), Gaps = 58/639 (9%) Query: 16 TYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYTNDADGFAKEIKDPSG 75 +YEYD AGNLVK GGV+ D + VTD +G+TT D G + +P Sbjct: 976 SYEYDRAGNLVKQILPNGGVIINEYDEMNRKIKVTDPDGNTTRIFYDNTGNIVKYVEPGN 1035 Query: 76 YT--------TIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQT--SSVTYD 125 Y T D+++R +I +A G + V+ + + A + +D S D Sbjct: 1036 YNPEKDDGVGTTYLYDSMNRLIQIVNAAGIV--VEKNIYNTAGEIIKKIDSVGYKSADND 1093 Query: 126 ANGNPVEHTNEAGSKTVSNYQVYRLSSTEDALQNSTTK--TYDALGRVIEAKDEAGAVTA 183 + + VE + + + V +++ E + ++ TYDA G + D G T Sbjct: 1094 NDRHGVEFSYDLAGRLVE------ITTPEAKIHGRKSQQYTYDAEGNITGIVDGNGNSTR 1147 Query: 184 YNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELLSVTDPLGA 243 Y+ D G++ +T+ +G + Y YD GN+++ D N T YTY+ N L + DP G Sbjct: 1148 YSLDLWGKIINITEPDGTNIKYDYDYAGNLVSTTDGNRNTTRYTYNSLNLLSEIIDPDGR 1207 Query: 244 KTRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDP 303 K ++YD G ++ G+STYY YNA + + G + Y+Y+ +G+ A I Sbjct: 1208 KIIFKYDRQGRMVQRIGKDGHSTYYTYNADNNITGCWEEEGQMERYEYNIDGSLAASI-S 1266 Query: 304 NHSIWTTKYD-SRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTR 362 +I T Y + L + T N ++ N G ++ +D +G Y YD LGR Sbjct: 1267 GTTIHTYTYTLAGRLKSKTTNG-RKVLEYDYNKNGFVSRLVDISGTPVEYTYDVLGRVAA 1325 Query: 363 VRNALGYETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNA-----EGSTTKYSY 417 + N Y Y+ + +++ + + YD +T + N E KY+Y Sbjct: 1326 ITNGGKISAKYEYNIDNTIAQVLYGSGICARYEYDLDKNITRLLNTDPTGKEMFVYKYAY 1385 Query: 418 DASGN-LLDKTNALGAVTSYRYDTLNRVIESVNPLQEITSLAYDENGNLQKVTEPDSNTT 476 D +GN +L + N G VT+Y YD LNR+ E + P YD NGN K D Sbjct: 1386 DGNGNPILKEEN--GKVTAYGYDALNRLQEVIYPGNVKERFTYDANGNRLKREFRDI-LE 1442 Query: 477 VYAYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGD--TRYTYDALNRPTSVIDPR 534 Y Y+ N++ Q + N L +Y+YD G +L+ + G+ Y+YD +R V +P Sbjct: 1443 QYEYDNCNRLIQ-RIKNGLVTEYEYDEKG--NLIKEKEGELTKLYSYDGFDRLIRVQNPD 1499 Query: 535 G---------NNVRYEWTATGQRSRIIYPDNTV---VSYDYDKLDRIK------QVTDAQ 576 G ++R G+ +R IY + V D+ DRI Q D Sbjct: 1500 GTYMENIYDAEDLRTISIENGRYNRYIYSGRNIACEVDEDWRLKDRIVRGHTILQKEDGN 1559 Query: 577 NGITSYLYDAAGRLKEKLLPNKGQ--STYSYDGAGQLLE 613 Y++++ G + L +KG+ + YSYD G +L+ Sbjct: 1560 KNAYYYIHNSHGDIT-ALTDDKGKIANAYSYDAFGNILD 1597 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 199/764 (26%), Positives = 292/764 (38%), Gaps = 164/764 (21%) Query: 3 RPVEEIDALGNRATYEYDTAGNLVKSTDALGGVV----TIARDSAGVPVSVTDAEGHTTA 58 R ++ + G T+EYD GNL+K T G + D G S DAE + T+ Sbjct: 469 RLIKTVSPGGGEVTFEYDDRGNLLKRTLKNGSRSYSEWSYTYDQYGRITSSRDAENNITS 528 Query: 59 YTNDADGFAKE--IKDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNAL 116 + + K IKD G T E D + R T IT G ++ + YD DR +T+A Sbjct: 529 FEYGEEDVNKPTLIKDAVGNTFRYEFDKVGRVTAITTGYGTVR-LRYDDCDRITHITDAE 587 Query: 117 DQTSSVTYDANGN------PVEHTN--EAGSKTVSNYQVY-RLSSTEDALQNSTTKTYDA 167 + YD GN P ++ E G+ Y +L T D L N YD Sbjct: 588 GNIIRLNYDKAGNMTKIIAPKQYAEKGENGAGYTFEYDAMDKLIKTIDPLGNVFAVKYDE 647 Query: 168 LGRVIE--------AKDEAGAVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNM---LTQ 216 G I+ ++ + G Y YD+ + +G + YD GN+ ++ Sbjct: 648 NGNKIKEINPNYYNSQKDDGIGIEYKYDTNHRRISTIFPDGSMSRTKYDPQGNIIKTISW 707 Query: 217 KDAKGNI-----TSYTYSKRNELLSVTDPLG-AKTRYRYDAAGNTIKETDALGNS----- 265 KD ++ YTY + N L + DP G +Y YD G +KE DA G S Sbjct: 708 KDYDKDLDDGPGMEYTYDEMNRLTQIIDPEGNVIKKYIYDEEGRIVKEIDAKGYSSADND 767 Query: 266 -----TYYDYNALGQLVKVTDALGA--------VTEYQYDKNGNQVAVIDPNHSIWTTKY 312 T Y YN G LV+ L + EY +DKNG V + ++Y Sbjct: 768 EERWGTIYKYNLAGWLVEKRTPLRQKDGKIYYNIIEYVHDKNGRVVKEKRSPEYVTKSEY 827 Query: 313 DSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTR---------- 362 + IN + G + E D G TYEYD+LG+ T Sbjct: 828 PKK---WNVIN-------YKYDPNGNLIEVTDGLGASITYEYDSLGKKTLEKMKINDKKQ 877 Query: 363 -----VRNALGY-----------------------ETIYAYDAQGNVEKIVNANHHETAF 394 V N++G ETIY YD GN+ ++++ + T F Sbjct: 878 KVTRYVYNSVGRLVKVIQELDGEDLSGYSNEKVLAETIYNYDPNGNLIEVISPEGYLTVF 937 Query: 395 TYDPLGRLTE-------------------VKNAEGSTTKYSYDASGNLLDKTNALGAVTS 435 YD R + + N + + Y YD +GNL+ + G V Sbjct: 938 KYDDANRRIKSILYQPQNGVKLIGSAYCALLNTKARSISYEYDRAGNLVKQILPNGGVII 997 Query: 436 YRYDTLNRVIESVNPLQEITSLAYDENGNLQKVTEP--------DSNTTVYAYNKGNQVE 487 YD +NR I+ +P T + YD GN+ K EP D T Y Y+ N++ Sbjct: 998 NEYDEMNRKIKVTDPDGNTTRIFYDNTGNIVKYVEPGNYNPEKDDGVGTTYLYDSMNRLI 1057 Query: 488 QIQYGNDLT--------------------------------VKYKYDLAGRRSLMTDSTG 515 QI + V++ YDLAGR +T Sbjct: 1058 QIVNAAGIVVEKNIYNTAGEIIKKIDSVGYKSADNDNDRHGVEFSYDLAGRLVEITTPEA 1117 Query: 516 DT------RYTYDALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDNTVVSYDYDKLDRI 569 +YTYDA T ++D GN+ RY G+ I PD T + YDYD + Sbjct: 1118 KIHGRKSQQYTYDAEGNITGIVDGNGNSTRYSLDLWGKIINITEPDGTNIKYDYDYAGNL 1177 Query: 570 KQVTDAQNGITSYLYDAAGRLKEKLLPNKGQSTYSYDGAGQLLE 613 TD T Y Y++ L E + P+ + + YD G++++ Sbjct: 1178 VSTTDGNRNTTRYTYNSLNLLSEIIDPDGRKIIFKYDRQGRMVQ 1221 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 234/912 (25%), Positives = 352/912 (38%), Gaps = 186/912 (20%) Query: 1 MNRPVEEIDALGNRATYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYT 60 +N+P DA+GN YE+D G + T G V + D +TDAEG+ Sbjct: 536 VNKPTLIKDAVGNTFRYEFDKVGRVTAITTGY-GTVRLRYDDCDRITHITDAEGNIIRLN 594 Query: 61 NDADGFAKEIKDP----------SGYTTIIERDTLHRTTKITDAEGKLQAVDYD------ 104 D G +I P +GYT E D + + K D G + AV YD Sbjct: 595 YDKAGNMTKIIAPKQYAEKGENGAGYT--FEYDAMDKLIKTIDPLGNVFAVKYDENGNKI 652 Query: 105 ----------QKDRAVAVTNALD-------------QTSSVTYDANGNPVEHTN------ 135 QKD + + D S YD GN ++ + Sbjct: 653 KEINPNYYNSQKDDGIGIEYKYDTNHRRISTIFPDGSMSRTKYDPQGNIIKTISWKDYDK 712 Query: 136 --EAGSKTVSNY-QVYRLSSTEDALQNSTTK-TYDALGRVIEAKDEAGAVTA-------- 183 + G Y ++ RL+ D N K YD GR+++ D G +A Sbjct: 713 DLDDGPGMEYTYDEMNRLTQIIDPEGNVIKKYIYDEEGRIVKEIDAKGYSSADNDEERWG 772 Query: 184 --YNYDSVGQLEEVTDAEGQSN--------TYTYDDNGNMLTQKDAKGNITSYTYSKR-- 231 Y Y+ G L E Q + Y +D NG ++ +K + +T Y K+ Sbjct: 773 TIYKYNLAGWLVEKRTPLRQKDGKIYYNIIEYVHDKNGRVVKEKRSPEYVTKSEYPKKWN 832 Query: 232 ---------NELLSVTDPLGAKTRYRYDAAGN----TIKETDALGNSTYYDYNALGQLVK 278 L+ VTD LGA Y YD+ G +K D T Y YN++G+LVK Sbjct: 833 VINYKYDPNGNLIEVTDGLGASITYEYDSLGKKTLEKMKINDKKQKVTRYVYNSVGRLVK 892 Query: 279 VTDALG-------------AVTEYQYDKNGNQVAVIDPNHSIWTTKYD--SRSLDAGTIN 323 V L A T Y YD NGN + VI P + KYD +R + + Sbjct: 893 VIQELDGEDLSGYSNEKVLAETIYNYDPNGNLIEVISPEGYLTVFKYDDANRRIKSILYQ 952 Query: 324 PLKEETAV--------TRNARGLMTEFLDAA---------GQKTTYEYDALGRNTRVRNA 366 P + AR + E+ A G EYD + R +V + Sbjct: 953 PQNGVKLIGSAYCALLNTKARSISYEYDRAGNLVKQILPNGGVIINEYDEMNRKIKVTDP 1012 Query: 367 LGYETIYAYDAQGNVEKIVNANHHE--------TAFTYDPLGRLTEVKNAEGSTT-KYSY 417 G T YD GN+ K V ++ T + YD + RL ++ NA G K Y Sbjct: 1013 DGNTTRIFYDNTGNIVKYVEPGNYNPEKDDGVGTTYLYDSMNRLIQIVNAAGIVVEKNIY 1072 Query: 418 DASGNLLDKTNALGAVTS----------YRYDTLNRVIESVNPLQEI-----TSLAYDEN 462 + +G ++ K +++G ++ + YD R++E P +I YD Sbjct: 1073 NTAGEIIKKIDSVGYKSADNDNDRHGVEFSYDLAGRLVEITTPEAKIHGRKSQQYTYDAE 1132 Query: 463 GNLQKVTEPDSNTTVYAYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGD-TRYTY 521 GN+ + + + N+T Y+ + ++ I + +KY YD AG TD + TRYTY Sbjct: 1133 GNITGIVDGNGNSTRYSLDLWGKIINITEPDGTNIKYDYDYAGNLVSTTDGNRNTTRYTY 1192 Query: 522 DALNRPTSVIDPRGNNVRYEWTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQNGITS 581 ++LN + +IDP G + +++ G+ + I D Y Y+ + I + + + Sbjct: 1193 NSLNLLSEIIDPDGRKIIFKYDRQGRMVQRIGKDGHSTYYTYNADNNITGCWEEEGQMER 1252 Query: 582 YLYDAAGRLKEKLLPNKGQSTYSYDGAGQLLEMKHTAPGGALLEQLTYVYDPAGNKIRSE 641 Y Y+ G L + TY+Y AG+L T G +LE Y Y+ G R Sbjct: 1253 YEYNIDGSLAAS-ISGTTIHTYTYTLAGRL--KSKTTNGRKVLE---YDYNKNGFVSRLV 1306 Query: 642 RQEGGSDEDNPAGTPRPADI-------ADYAYDALNQLVQV-------------QKQNGS 681 G E R A I A Y Y+ N + QV +N + Sbjct: 1307 DISGTPVEYTYDVLGRVAAITNGGKISAKYEYNIDNTIAQVLYGSGICARYEYDLDKNIT 1366 Query: 682 RVV-------------YSYDTVGNRLGKETTGAGTTIKELYTYDAANKLTHFEKGSDYKD 728 R++ Y+YD GN + KE G T Y YDA N+L + K+ Sbjct: 1367 RLLNTDPTGKEMFVYKYAYDGNGNPILKEENGKVTA----YGYDALNRLQEVIYPGNVKE 1422 Query: 729 -YTYDKRGNLLE 739 +TYD GN L+ Sbjct: 1423 RFTYDANGNRLK 1434 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 193/787 (24%), Positives = 330/787 (41%), Gaps = 148/787 (18%) Query: 16 TYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYTNDADGF-AKEIKDPS 74 TY+YD AG+L+ +D+ + + + G+ +V ++ +G+ I D + Sbjct: 249 TYKYDQAGSLISISDSNNNEIQLKYNREGLLSTVISTRRKLLMFS--YEGYRVSSITDHT 306 Query: 75 GYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTSSV----TYDANGNP 130 G + D T++ +G YD V + + DQ + TYD NG Sbjct: 307 GRKLKYKYDEKGNLTQVIYPDGGKITYAYDD----VGLISVTDQNGNTYVQNTYDKNGRV 362 Query: 131 VEHTNEAGSKTVSNYQVYRLSSTEDALQNSTTKTYDALGRVIEAKDEAGAVTAYNYDSVG 190 ++ + ++ + Y +T L++ T+ Y YN D + Sbjct: 363 IKQLDHQENELIIEYDDENRENTFKWLKSGITRVY-----------------KYNTDML- 404 Query: 191 QLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELLSVT--DPLGAKTRYR 248 + EV +G YTYD+N N ++ D GN T Y + L+ VT +P KT+Y Sbjct: 405 -VTEVRYDDGSVQKYTYDENLNRNSETDRNGNTTCKKYDDKGNLIEVTSPEPFCYKTKYS 463 Query: 249 YDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDPNHSIW 308 YD G IK G ++Y+ G L+K T KNG++ ++S W Sbjct: 464 YDENGRLIKTVSPGGGEVTFEYDDRGNLLKRT-----------LKNGSR------SYSEW 506 Query: 309 TTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEY--DALGRNTRVRNA 366 + YD G +T DA T++EY + + + T +++A Sbjct: 507 SYTYDQ---------------------YGRITSSRDAENNITSFEYGEEDVNKPTLIKDA 545 Query: 367 LGYETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGNLLD- 425 +G Y +D G V I + YD R+T + +AEG+ + +YD +GN+ Sbjct: 546 VGNTFRYEFDKVGRVTAITTG-YGTVRLRYDDCDRITHITDAEGNIIRLNYDKAGNMTKI 604 Query: 426 -------KTNALGAVTSYRYDTLNRVIESVNPLQEITSLAYDENGNLQKVTEPDSNTTVY 478 + GA ++ YD ++++I++++PL + ++ YDENGN K P+ Sbjct: 605 IAPKQYAEKGENGAGYTFEYDAMDKLIKTIDPLGNVFAVKYDENGNKIKEINPN------ 658 Query: 479 AYNKGNQVEQIQYGNDLTVKYKYDLAGRR--SLMTD-STGDTRYTYDALNRPTSVIDPRG 535 YN Q + + ++YKYD RR ++ D S T+Y DP+G Sbjct: 659 YYNS-------QKDDGIGIEYKYDTNHRRISTIFPDGSMSRTKY------------DPQG 699 Query: 536 NNVRYEWTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQ-NGITSYLYDAAGRLKEKL 594 N ++ T + + D + Y YD+++R+ Q+ D + N I Y+YD GR+ K Sbjct: 700 NIIK---TISWKDYDKDLDDGPGMEYTYDEMNRLTQIIDPEGNVIKKYIYDEEGRIV-KE 755 Query: 595 LPNKGQST-----------YSYDGAGQLLEMK---HTAPGGALLEQLTYVYDPAGNKIRS 640 + KG S+ Y Y+ AG L+E + G + YV+D G ++ Sbjct: 756 IDAKGYSSADNDEERWGTIYKYNLAGWLVEKRTPLRQKDGKIYYNIIEYVHDKNGRVVKE 815 Query: 641 ERQEGGSDEDNPAGTPRPADIADYAYDALNQLVQVQKQNGSRVVYSYDTVGNR-LGKETT 699 +R + + P+ ++ +Y YD L++V G+ + Y YD++G + L K Sbjct: 816 KRS---PEYVTKSEYPKKWNVINYKYDPNGNLIEVTDGLGASITYEYDSLGKKTLEKMKI 872 Query: 700 GAGTTIKELYTYDAANKLTHFEKGSDYKD--------------YTYDKRGNLLEVSGIDS 745 Y Y++ +L + D +D Y YD GNL+EV I Sbjct: 873 NDKKQKVTRYVYNSVGRLVKVIQELDGEDLSGYSNEKVLAETIYNYDPNGNLIEV--ISP 930 Query: 746 EAALGLF 752 E L +F Sbjct: 931 EGYLTVF 937 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 13/113 (11%) Query: 1031 FYLSDAQGSVIGLEGQDGSMSARYRYDEFG-VAEAPEKFDLNWSGPDNLFGYTSLGYDYY 1089 +Y+ ++ G + L G ++ Y YD FG + ++ E+ D N F Y+ YD Sbjct: 1564 YYIHNSHGDITALTDDKGKIANAYSYDAFGNILDSVERVD-------NRFKYSGEVYDSV 1616 Query: 1090 SGYSHAQARDFDSSIGRFISEDTYEGQLIDPLSLNLYAYVKNNPLRYTDPSGN 1142 +G + +AR ++ SIGRFI ED + G LNLYAYV NNP+RY DP+GN Sbjct: 1617 AGQYYLRARYYNPSIGRFIQEDPFRGD-----GLNLYAYVANNPVRYIDPTGN 1664 >ref|NP_901101.1| probable Rhs-family protein [Chromobacterium violaceum ATCC 12472] gb|AAQ59106.1| probable Rhs-family protein [Chromobacterium violaceum ATCC 12472] Length = 1513 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 164/573 (28%), Positives = 253/573 (44%), Gaps = 39/573 (6%) Query: 185 NYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELLSVTDPLGAK 244 NYD+ +L + Y+YDD GN++ + A G+ + Y +++ L+ + DP+G K Sbjct: 650 NYDANKRLIIHIHPDATQENYSYDDRGNLVLHERADGSEVHFVYDEQDNLVEIIDPMGEK 709 Query: 245 TRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDPN 304 YD G I+ETD LG+ T Y YN G V +TDA G + Y +G + D + Sbjct: 710 WLRAYDDKGQLIEETDPLGHKTKYAYNEQGLPVAITDAKGGAKKIAYRPDGLLESYTDCS 769 Query: 305 HSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTRVR 364 S +YD R ++ + T A G + + GQ T E+DA R ++ Sbjct: 770 GSATQWQYDERGRPLLIVDAMGNATRYQYAANGTLQAIVQPDGQATQLEHDAEARLLKIT 829 Query: 365 NALGYETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGNLL 424 + LG T Y YD G ++K +AN H + YD LGRLT ++N ++ YD G L Sbjct: 830 DPLGRGTHYEYDKAGRLQKRTDANGHSLGYQYDKLGRLTALRNENHRYYRFDYDDGGRLT 889 Query: 425 DKTNALGAVTSYRYDTLNRVIESVNPLQEITSLAYDENGNLQKVTEPDSNTTVYAYNKGN 484 +T G+ T Y YD R+ + V T YD G L + + P+S + + Y+ Sbjct: 890 AETGFDGSATRYVYDNAGRLAQQVEG-DVATDYRYDRAGRLIERSAPNSKES-FGYDPAG 947 Query: 485 QVEQIQ------------YGNDLTVKYKYDLAGRRSLMTDSTGDTRYTYDALNRPTSVID 532 ++ Q + GN + + Y +AG T ++ YD L + I Sbjct: 948 RLFQAKNRYASLRWVYDPVGNVVEEHHGYHVAG-----VKETYRWQHEYDKLGNRIATIR 1002 Query: 533 PRGNNVRYEWTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQNGITSYLYDAAGRLKE 592 P G+ V +G +++ + + + DKL R Q + YD AGRL Sbjct: 1003 PDGHRVDVLNYGSGHVHGLLFGQRDIFNLERDKLHRETQRVLGNALQQTLAYDKAGRLSS 1062 Query: 593 KLLPNKGQST--YSYDGAGQLLEMKHTAPGGALLEQLTYVYDPAGNKIRSERQEG-GSDE 649 + L Q + Y YD AGQL+ + G QL+Y YDP G + + +G S Sbjct: 1063 QRLMGATQWSRQYQYDAAGQLVGIADNRHG-----QLSYRYDPVGRLLEAATPKGVESFR 1117 Query: 650 DNPAGTP---RPADIADYAYDALNQLVQVQKQNGSRVVYSYDTVGNRLGKETTGAGTTIK 706 +PAG PA Y L L+ Q R Y YD+ GN + K G+ T ++ Sbjct: 1118 FDPAGNLLDNAPAADGHQDYSLLGNLL---SQYAGR-HYRYDSRGNLVEKRVNGSLTRLE 1173 Query: 707 ELYTYDAANKLTHFEKGSDYK-DYTYDKRGNLL 738 +D+ N+L+ + DY YD G + Sbjct: 1174 ----WDSHNRLSRLIAPDGQRTDYHYDPLGRRI 1202 Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 146/517 (28%), Positives = 234/517 (45%), Gaps = 37/517 (7%) Query: 5 VEEIDALGNRATYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYTNDAD 64 VE ID +G + YD G L++ TD LG A + G+PV++TDA+G D Sbjct: 700 VEIIDPMGEKWLRAYDDKGQLIEETDPLGHKTKYAYNEQGLPVAITDAKGGAKKIAYRPD 759 Query: 65 GFAKEIKDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTSSVTY 124 G + D SG T + D R I DA G Y A+ Q + + + Sbjct: 760 GLLESYTDCSGSATQWQYDERGRPLLIVDAMGNATRYQYAANGTLQAIVQPDGQATQLEH 819 Query: 125 DANGNPVEHTNEAGSKTVSNY-QVYRLSSTEDALQNSTTKTYDALGRVIEAKDEAGAVTA 183 DA ++ T+ G T Y + RL DA +S YD LGR+ ++E Sbjct: 820 DAEARLLKITDPLGRGTHYEYDKAGRLQKRTDANGHSLGYQYDKLGRLTALRNENHRYYR 879 Query: 184 YNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNI-TSYTYSKRNELLSVTDPLG 242 ++YD G+L T +G + Y YD+ G + Q +G++ T Y Y + L+ + P Sbjct: 880 FDYDDGGRLTAETGFDGSATRYVYDNAGRLAQQ--VEGDVATDYRYDRAGRLIERSAP-N 936 Query: 243 AKTRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTDA--LGAVTE-----YQYDKNG 295 +K + YD AG + + S + Y+ +G +V+ + V E ++YDK G Sbjct: 937 SKESFGYDPAGRLFQAKNRYA-SLRWVYDPVGNVVEEHHGYHVAGVKETYRWQHEYDKLG 995 Query: 296 NQVAVIDPN-HSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEY 354 N++A I P+ H + Y S + G + ++ + R+ T+ + + T Y Sbjct: 996 NRIATIRPDGHRVDVLNYGSGHVH-GLLFGQRDIFNLERDKLHRETQRVLGNALQQTLAY 1054 Query: 355 DALGR--NTRVRNALGYETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGST 412 D GR + R+ A + Y YDA G + I + H + ++ YDP+GRL E +G Sbjct: 1055 DKAGRLSSQRLMGATQWSRQYQYDAAGQLVGIADNRHGQLSYRYDPVGRLLEAATPKGVE 1114 Query: 413 TKYSYDASGNLLDKTNA---------LGAVTS------YRYDTLNRVIES-VNPLQEITS 456 + + +D +GNLLD A LG + S YRYD+ ++E VN +T Sbjct: 1115 S-FRFDPAGNLLDNAPAADGHQDYSLLGNLLSQYAGRHYRYDSRGNLVEKRVN--GSLTR 1171 Query: 457 LAYDENGNLQKVTEPDSNTTVYAYNK-GNQVEQIQYG 492 L +D + L ++ PD T Y Y+ G ++ +I G Sbjct: 1172 LEWDSHNRLSRLIAPDGQRTDYHYDPLGRRIAKISQG 1208 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 184/717 (25%), Positives = 279/717 (38%), Gaps = 77/717 (10%) Query: 70 IKDPSGYTTIIE-RDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTN-------ALDQTSS 121 +KD +G T I RD R +++ + G + A+ YD+ R V + A+ + + Sbjct: 476 VKDRAGNTLAINFRDG--RISQLVSSAGYVVALSYDKAGRIVRIEQHDPETGLAMRKLAE 533 Query: 122 VTY--------DANGNPVEHTNEAGSKTVSNYQVYRLSSTEDALQNSTTKTYD---ALGR 170 Y DA G+ + T+E G YQ + ++ D TT +D A R Sbjct: 534 YRYTDIPQLDGDA-GDLLSATDENGQSWSYQYQHHLITRYTDRTGRGTTLEWDGSHAKAR 592 Query: 171 VI-EAKDEAGAVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYS 229 I E D+ +D+ L VTDA G++ Y +D+ G + Y Sbjct: 593 AIREYADDGSLDIRLAWDARIDLTYVTDAYGRTTEYYFDEKGYHYRTVFPDKSEEWLNYD 652 Query: 230 KRNELLSVTDPLGAKTRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVTEY 289 L+ P + Y YD GN + A G+ ++ Y+ LV++ D +G Sbjct: 653 ANKRLIIHIHPDATQENYSYDDRGNLVLHERADGSEVHFVYDEQDNLVEIIDPMGEKWLR 712 Query: 290 QYDKNGNQVAVIDPNHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQK 349 YD G + DP Y+ + L + + GL+ + D +G Sbjct: 713 AYDDKGQLIEETDPLGHKTKYAYNEQGLPVAITDAKGGAKKIAYRPDGLLESYTDCSGSA 772 Query: 350 TTYEYDALGRNTRVRNALGYETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAE 409 T ++YD GR + +A+G T Y Y A G ++ IV + T +D RL ++ + Sbjct: 773 TQWQYDERGRPLLIVDAMGNATRYQYAANGTLQAIVQPDGQATQLEHDAEARLLKITDPL 832 Query: 410 GSTTKYSYDASGNLLDKTNALGAVTSYRYDTLNRVIESVNPLQEITSLAYDENGNLQKVT 469 G T Y YD +G L +T+A G Y+YD L R+ N YD+ G L T Sbjct: 833 GRGTHYEYDKAGRLQKRTDANGHSLGYQYDKLGRLTALRNENHRYYRFDYDDGGRLTAET 892 Query: 470 EPDSNTTVYAYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGDTRYTYD------- 522 D + T Y Y+ ++ Q Q D+ Y+YD AGR + + YD Sbjct: 893 GFDGSATRYVYDNAGRLAQ-QVEGDVATDYRYDRAGRLIERSAPNSKESFGYDPAGRLFQ 951 Query: 523 ALNRPTS---VIDPRGNNV-----------------RYEWTATGQRSRIIYPDNTVVSYD 562 A NR S V DP GN V ++E+ G R I PD V Sbjct: 952 AKNRYASLRWVYDPVGNVVEEHHGYHVAGVKETYRWQHEYDKLGNRIATIRPDGHRVDVL 1011 Query: 563 YDKLDRIKQVTDAQNGITSYLYDAAGRLKEKLLPNKGQSTYSYDGAGQLLEMKHTAPGGA 622 + + Q I + D R +++L N Q T +YD AG+L + GA Sbjct: 1012 NYGSGHVHGLLFGQRDIFNLERDKLHRETQRVLGNALQQTLAYDKAGRLSSQRLM---GA 1068 Query: 623 LLEQLTYVYDPAGNKIRSERQEGGSDEDNPAGTPRPADIADYAYDALNQLVQVQKQNGSR 682 Y YD AG + DN G Y YD + +L++ G Sbjct: 1069 TQWSRQYQYDAAGQLV--------GIADNRHGQ------LSYRYDPVGRLLEAATPKGVE 1114 Query: 683 VVYSYDTVGNRLGKETTGAGTTIKELYTYDAANKLTHFEKGSDYKDYTYDKRGNLLE 739 + +D GN L G L N L+ + + Y YD RGNL+E Sbjct: 1115 S-FRFDPAGNLLDNAPAADGHQDYSLL----GNLLSQYAG----RHYRYDSRGNLVE 1162 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 167/667 (25%), Positives = 268/667 (40%), Gaps = 86/667 (12%) Query: 148 YRLSSTEDALQNSTTKTYDALGRVIEAKDEAGAVTAYNYDSVGQLEEVTDAEGQSNT--- 204 Y+L+ +D N+ + GR+ + AG V A +YD G++ + + ++ Sbjct: 471 YQLALVKDRAGNTLAINFRD-GRISQLVSSAGYVVALSYDKAGRIVRIEQHDPETGLAMR 529 Query: 205 ----YTY-------DDNGNMLTQKDAKGNITSYTYSKRNELLSVTDPLGAKTRYRYD--- 250 Y Y D G++L+ D G SY Y + + + TD G T +D Sbjct: 530 KLAEYRYTDIPQLDGDAGDLLSATDENGQSWSYQY-QHHLITRYTDRTGRGTTLEWDGSH 588 Query: 251 AAGNTIKE-TDALGNSTYYDYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDPNHSIWT 309 A I+E D ++A L VTDA G TEY +D+ G + P+ S Sbjct: 589 AKARAIREYADDGSLDIRLAWDARIDLTYVTDAYGRTTEYYFDEKGYHYRTVFPDKSEEW 648 Query: 310 TKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTRVRNALGY 369 YD+ I+P + + + RG + A G + + YD + + +G Sbjct: 649 LNYDANKRLIIHIHPDATQENYSYDDRGNLVLHERADGSEVHFVYDEQDNLVEIIDPMGE 708 Query: 370 ETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGNLLDKTNA 429 + + AYD +G + + + H+T + Y+ G + +A+G K +Y G L T+ Sbjct: 709 KWLRAYDDKGQLIEETDPLGHKTKYAYNEQGLPVAITDAKGGAKKIAYRPDGLLESYTDC 768 Query: 430 LGAVTSYRYDTLNRVIESVNPLQEITSLAYDENGNLQKVTEPDSNTTVYAYNKGNQVEQI 489 G+ T ++YD R + V+ + T Y NG LQ + +PD T ++ ++ +I Sbjct: 769 SGSATQWQYDERGRPLLIVDAMGNATRYQYAANGTLQAIVQPDGQATQLEHDAEARLLKI 828 Query: 490 QYGNDLTVKYKYDLAGRRSLMTDSTGDTR-YTYDALNRPTSVIDPRGNNVRYEWTATGQR 548 Y+YD AGR TD+ G + Y YD L R T++ + R+++ G+ Sbjct: 829 TDPLGRGTHYEYDKAGRLQKRTDANGHSLGYQYDKLGRLTALRNENHRYYRFDYDDGGRL 888 Query: 549 SRIIYPDNTVVSYDYDKLDRIKQVTDAQNGITSYLYDAAGRLKEKLLPNKGQSTYSYDGA 608 + D + Y YD R+ Q + + T Y YD AGRL E+ PN +S + YD A Sbjct: 889 TAETGFDGSATRYVYDNAGRLAQQVEG-DVATDYRYDRAGRLIERSAPNSKES-FGYDPA 946 Query: 609 GQLLEMKHTAPGGALLEQLTYVYDPAGNKIRSER--QEGGSDE-----------DNPAGT 655 G+L + K+ L +VYDP GN + G E N T Sbjct: 947 GRLFQAKNR------YASLRWVYDPVGNVVEEHHGYHVAGVKETYRWQHEYDKLGNRIAT 1000 Query: 656 PRP----------------------ADIADYAYDALNQLVQVQKQNGSRVVYSYDTVGNR 693 RP DI + D L++ Q N + +YD G R Sbjct: 1001 IRPDGHRVDVLNYGSGHVHGLLFGQRDIFNLERDKLHRETQRVLGNALQQTLAYDKAG-R 1059 Query: 694 LGKETTGAGTTIKELYTYDAANKLT------HFEKGSDY---------------KDYTYD 732 L + T Y YDAA +L H + Y + + +D Sbjct: 1060 LSSQRLMGATQWSRQYQYDAAGQLVGIADNRHGQLSYRYDPVGRLLEAATPKGVESFRFD 1119 Query: 733 KRGNLLE 739 GNLL+ Sbjct: 1120 PAGNLLD 1126 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 164/609 (26%), Positives = 222/609 (36%), Gaps = 115/609 (18%) Query: 49 VTDAEGHTTAYTNDADGFAKEIKDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDR 108 VTDA G TT Y D G+ P + D R + + YD + Sbjct: 618 VTDAYGRTTEYYFDEKGYHYRTVFPDKSEEWLNYDANKRLIIHIHPDATQENYSYDDRGN 677 Query: 109 AVAVTNALDQTSSVTYDANGNPVEHTNEAGSKTVSNYQVY-RLSSTEDALQNSTTKTYDA 167 V A YD N VE + G K + Y +L D L + T Y+ Sbjct: 678 LVLHERADGSEVHFVYDEQDNLVEIIDPMGEKWLRAYDDKGQLIEETDPLGHKTKYAYNE 737 Query: 168 LGRVIEAKDEAGAVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYT 227 G + D G Y G LE TD G + + YD+ G L DA GN T Y Sbjct: 738 QGLPVAITDAKGGAKKIAYRPDGLLESYTDCSGSATQWQYDERGRPLLIVDAMGNATRYQ 797 Query: 228 YSKRNELLSVTDPLGAKTRYRYDAAGNTIKETDALGNSTYYDYNALGQLVKVTDALGAVT 287 Y+ L ++ P G T+ +DA +K TD LG T+Y+Y+ G+L K TDA G Sbjct: 798 YAANGTLQAIVQPDGQATQLEHDAEARLLKITDPLGRGTHYEYDKAGRLQKRTDANGHSL 857 Query: 288 EYQYDKNGNQVAVIDPNHSIWTTKYDSRSLDAGTINPLKEETAVTRNARGLMTEFLDAAG 347 YQYDK G A+ + NH + YD D G L ET G Sbjct: 858 GYQYDKLGRLTALRNENHRYYRFDYD----DGGR---LTAETGFD--------------G 896 Query: 348 QKTTYEYDALGRNTRVRNALGYETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKN 407 T Y YD GR + T Y YD G + + N E+ F YDP GRL + KN Sbjct: 897 SATRYVYDNAGRLAQQVEG-DVATDYRYDRAGRLIERSAPNSKES-FGYDPAGRLFQAKN 954 Query: 408 AEGSTTKYSYDASGNLLDKTN---ALGAVTSYR----YDTLNRVIESVNP---------- 450 S ++ YD GN++++ + G +YR YD L I ++ P Sbjct: 955 RYASL-RWVYDPVGNVVEEHHGYHVAGVKETYRWQHEYDKLGNRIATIRPDGHRVDVLNY 1013 Query: 451 ----------------------------------LQEITSLAYDENGNL--QKVTEPDSN 474 LQ+ +LAYD+ G L Q++ Sbjct: 1014 GSGHVHGLLFGQRDIFNLERDKLHRETQRVLGNALQQ--TLAYDKAGRLSSQRLMGATQW 1071 Query: 475 TTVYAYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGDTRYTYDAL-----NRPTS 529 + Y Y+ Q+ I + Y+YD GR G + +D N P + Sbjct: 1072 SRQYQYDAAGQLVGIADNRHGQLSYRYDPVGRLLEAATPKGVESFRFDPAGNLLDNAPAA 1131 Query: 530 ---------------------VIDPRGNNV---------RYEWTATGQRSRIIYPDNTVV 559 D RGN V R EW + + SR+I PD Sbjct: 1132 DGHQDYSLLGNLLSQYAGRHYRYDSRGNLVEKRVNGSLTRLEWDSHNRLSRLIAPDGQRT 1191 Query: 560 SYDYDKLDR 568 Y YD L R Sbjct: 1192 DYHYDPLGR 1200 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 148/565 (26%), Positives = 236/565 (41%), Gaps = 70/565 (12%) Query: 211 GNMLTQKDAKGNITSYTYSKRNELLSVTDPLGAKTRYRY----DAAGNTI---------- 256 G+ LT+ D K + S ++ +EL+ + + G +RY+ D AGNT+ Sbjct: 441 GHTLTRLDDK--LISLSFG--HELVHLYEKHG--SRYQLALVKDRAGNTLAINFRDGRIS 494 Query: 257 KETDALGNSTYYDYNALGQLVKVTD-------ALGAVTEYQY-------DKNGNQVAVID 302 + + G Y+ G++V++ A+ + EY+Y G+ ++ D Sbjct: 495 QLVSSAGYVVALSYDKAGRIVRIEQHDPETGLAMRKLAEYRYTDIPQLDGDAGDLLSATD 554 Query: 303 PNHSIWTTKYD----SRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALG 358 N W+ +Y +R D E AR + E+ D +DA Sbjct: 555 ENGQSWSYQYQHHLITRYTDRTGRGTTLEWDGSHAKARAI-REYADDGSLDIRLAWDARI 613 Query: 359 RNTRVRNALGYETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYD 418 T V +A G T Y +D +G + V + E YD RL + + + YSYD Sbjct: 614 DLTYVTDAYGRTTEYYFDEKGYHYRTVFPDKSEEWLNYDANKRLIIHIHPDATQENYSYD 673 Query: 419 ASGNLLDKTNALGAVTSYRYDTLNRVIESVNPLQEITSLAYDENGNLQKVTEPDSNTTVY 478 GNL+ A G+ + YD + ++E ++P+ E AYD+ G L + T+P + T Y Sbjct: 674 DRGNLVLHERADGSEVHFVYDEQDNLVEIIDPMGEKWLRAYDDKGQLIEETDPLGHKTKY 733 Query: 479 AYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGD-TRYTYDALNRPTSVIDPRGNN 537 AYN+ I K Y G TD +G T++ YD RP ++D GN Sbjct: 734 AYNEQGLPVAITDAKGGAKKIAYRPDGLLESYTDCSGSATQWQYDERGRPLLIVDAMGNA 793 Query: 538 VRYEWTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQNGITSYLYDAAGRLKEKLLPN 597 RY++ A G I+ PD ++D R+ ++TD T Y YD AGRL+++ N Sbjct: 794 TRYQYAANGTLQAIVQPDGQATQLEHDAEARLLKITDPLGRGTHYEYDKAGRLQKRTDAN 853 Query: 598 KGQSTYSYDGAGQLLEMKHTAPGGALLEQLTYVYD-PAGNKIRSERQEGGSDEDNPAGTP 656 Y YD G+L +++ Y +D G ++ +E GS Sbjct: 854 GHSLGYQYDKLGRLTALRNE-------NHRYYRFDYDDGGRLTAETGFDGS--------- 897 Query: 657 RPADIADYAYDALNQLVQVQKQNGSRVVYSYDTVGNRLGKETTGAGTTIKELYTYDAANK 716 Y YD +L Q Q + Y YD R G+ + KE + YD A + Sbjct: 898 ----ATRYVYDNAGRLAQ-QVEGDVATDYRYD----RAGRLIERSAPNSKESFGYDPAGR 948 Query: 717 LTHFEKGSDYKD--YTYDKRGNLLE 739 L F+ + Y + YD GN++E Sbjct: 949 L--FQAKNRYASLRWVYDPVGNVVE 971 >ref|NP_900908.1| probable rhs-related protein [Chromobacterium violaceum ATCC 12472] gb|AAQ58913.1| probable rhs-related protein [Chromobacterium violaceum ATCC 12472] Length = 1132 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 220/835 (26%), Positives = 352/835 (42%), Gaps = 150/835 (17%) Query: 9 DALGNRATYEYDTAGNLVKSTDALGGVVTIARDSAGVPVSVTDAEGHTTAYTNDADGFAK 68 D+ GN YD+ ++ TD G V+ A D VT A+G + Y +A Sbjct: 273 DSWGNAIKLAYDSNNHIASMTDPAGNVIKYAYDDNNNLALVTYADGKSVQYLYQHALYAN 332 Query: 69 EIKDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALD---QTSSVTYD 125 + T I D G V + D A +NAL + ++TY Sbjct: 333 LL------------------TGIVDENGT-NYVSWAYDDVGRATSNALAGGVASYTLTYS 373 Query: 126 ANGN-----PVEHTNEAGSKTVSNYQV---YRLSSTEDALQNSTTKTYDALGRVIEAKDE 177 ++ N P+ T TV+ + S ++T+ +YD +I D Sbjct: 374 SSTNTSVKDPLNATRSYNFVTVNGRNLPTGTNQPSGSGCASSNTSVSYDNQANIISKIDF 433 Query: 178 AGAVTAYNYDSVGQLE-EVTDAEG--QSNT-----------------------YTYDDNG 211 G T Y YD LE + +A G Q+ T YTYD+ G Sbjct: 434 NGNKTIYQYDLARNLETQRVEAYGTPQARTISTQWHPSLALPLKIASPQKLELYTYDNGG 493 Query: 212 NMLT-----QKDA------------KGNITSYTYSKRNELLSVTDPLGAKTRYRYDAAGN 254 N+LT D+ G +Y+Y+ ++L++TDP+G+K++Y YD GN Sbjct: 494 NLLTYVVQPTSDSDGSSGLNVLGVGSGRTWAYSYNNYGQILTMTDPIGSKSQYEYDNKGN 553 Query: 255 TIKETDALGNSTYYD-YNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDPNHSIWTTKYD 313 + T+A+G T D Y+A G++ +V G Y YD G +++ + + + D Sbjct: 554 LSQITNAMGQITTLDQYDANGRVGRVISPAGVAISYSYDLRGR---LVEMDFYAASNQSD 610 Query: 314 SRSLDAGTINPLKEETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTRVRNALGYETIY 373 ++S +T + G +T+ A +Y+YD R T V + G + Y Sbjct: 611 TQS-----------KTLYRYDGVGNLTQITLADSSVLSYQYDPAHRLTGVTDTQGNKISY 659 Query: 374 AYDAQGNVEKIVNAN-----HHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGNLLDKTN 428 D GN ++ + + YD LGRL ++ G + Y YDA+GNL ++ Sbjct: 660 TLDNAGNRTQVKVTDPSGNLARQQNRAYDQLGRLQQIIGMSGQSYTYQYDANGNLTQISD 719 Query: 429 ALGAVTSYRYDTLNRVIESVNPLQEITSLAYDENGNLQKVTEPDSNTTVYAYNKGNQVEQ 488 AL VT+ +YD LNR+I+ ++PL ++ YD L VT+P Sbjct: 720 ALNRVTTNQYDPLNRLIKKIDPLGGVSQYGYDLLDQLTSVTDP----------------- 762 Query: 489 IQYGNDLTVKYKYD-LAGRRSLMTDSTGDTRYTYDALNRPTSVIDPRGNNVRYEWTATGQ 547 LT KY D L R + + +G++ Y YDA R + D R Y++ A + Sbjct: 763 ----RKLTTKYTLDGLGNRTEVNSPDSGNSSYVYDAAGRMIQMTDARKVTATYQYDALNR 818 Query: 548 RSRIIYPDNTVVSYDYD-KL-DRIKQVTDAQNGITSYLYDAAGRLKE--KLLPNKGQSTY 603 + I YPD T +SY +D KL + Q++D ++G Y YDA G +K+ + +P G TY Sbjct: 819 LTTITYPDQT-ISYAWDNKLPGYLSQISD-ESGTIVYDYDAKGSVKQLTQTIPASGGITY 876 Query: 604 SYDGAGQLLEMKHTAPGGALLEQLTYVYDPAGNKIRSERQEGGSDEDNPAGTPRPADIA- 662 G ++ + + G AL + L P+G K+ + Q G E + P ++IA Sbjct: 877 ----PGLNVQYSYNSAGQALQQLL-----PSGQKLSYKYQNGVVTEIDLGDKPLVSNIAY 927 Query: 663 -------DYAYDALNQLVQVQKQNGSRV----------VYSYDTVGNRLGKETTGAGTTI 705 Y Y+ V+ Q +G RV V SYDTV +RL + + + Sbjct: 928 FPLGGVRSYQYNGSQVFVRTQDSDG-RVSSITSPVMNKVQSYDTV-DRLTQVSDALSPSR 985 Query: 706 KELYTYDAANKLTHFEKGSDYKDYTYDKRGNLLEVSGIDSEAALGLFTAKTRAQK 760 + Y+YD + L G+ Y YD GN + + + AL + + R Q+ Sbjct: 986 TQSYSYDKLDHLQVHTLGASSWSYQYDINGNRTQTTTNGNTVALQMEGSSNRLQQ 1040 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 198/759 (26%), Positives = 323/759 (42%), Gaps = 112/759 (14%) Query: 59 YTNDADGFAKEIKDPSGYTTIIERDTLHRTTK--ITDAEGKLQAVDYDQKDRAVAVTNAL 116 + N+ F + G + + + LH K A+GK+ V + D A+ N+ Sbjct: 143 WQNNHLSFTRRYNSLGGTISGLGPNWLHEYDKSITVSADGKIANVL--RSDGALLTFNSG 200 Query: 117 DQTSSVTYDANGNPVEHTNEAGSKTVSNYQVYRLSSTEDALQNSTTKTYDALGRVIEAKD 176 Q + + + + NE G T +Y+LSS + +++TY A G++++ + Sbjct: 201 AQGWAGSSNITDTLISKKNELGQITG---WIYQLSS------DGSSETYSATGKLLQVQH 251 Query: 177 EAGAVTAYNYDSVG-QLEEVTDAEGQSNTYTYDDNGNMLTQKDAKGNITSYTYSKRNELL 235 G V +YDSVG L + D+ G + YD N ++ + D GN+ Y Y N L Sbjct: 252 ANGQVINLSYDSVGLNLINIADSWGNAIKLAYDSNNHIASMTDPAGNVIKYAYDDNNNLA 311 Query: 236 SVTDPLGAKTRYRYDAA--GNTIKE-TDALG-NSTYYDYNALGQLVKVTDAL-GAVTEY- 289 VT G +Y Y A N + D G N + Y+ +G+ ++AL G V Y Sbjct: 312 LVTYADGKSVQYLYQHALYANLLTGIVDENGTNYVSWAYDDVGR--ATSNALAGGVASYT 369 Query: 290 -QYDKNGNQVAVIDPNHSIWTTKY---DSRSLDAGTINP-----LKEETAVTRNARGLMT 340 Y + N +V DP ++ + + + R+L GT P T+V+ + + + Sbjct: 370 LTYSSSTN-TSVKDPLNATRSYNFVTVNGRNLPTGTNQPSGSGCASSNTSVSYDNQANII 428 Query: 341 EFLDAAGQKTTYEYDALGRNTRVRNALGYET---------------------------IY 373 +D G KT Y+YD L RN + Y T +Y Sbjct: 429 SKIDFNGNKTIYQYD-LARNLETQRVEAYGTPQARTISTQWHPSLALPLKIASPQKLELY 487 Query: 374 AYDAQGNVEKIVNANHHET-----------------AFTYDPLGRLTEVKNAEGSTTKYS 416 YD GN+ V ++ A++Y+ G++ + + GS ++Y Sbjct: 488 TYDNGGNLLTYVVQPTSDSDGSSGLNVLGVGSGRTWAYSYNNYGQILTMTDPIGSKSQYE 547 Query: 417 YDASGNLLDKTNALGAVTSY-RYDTLNRVIESVNPLQEITSLAYDENGNLQKV------T 469 YD GNL TNA+G +T+ +YD RV ++P S +YD G L ++ Sbjct: 548 YDNKGNLSQITNAMGQITTLDQYDANGRVGRVISPAGVAISYSYDLRGRLVEMDFYAASN 607 Query: 470 EPDSNT-TVYAYNKGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGD-TRYTYD-ALNR 526 + D+ + T+Y Y+ + QI + + Y+YD A R + +TD+ G+ YT D A NR Sbjct: 608 QSDTQSKTLYRYDGVGNLTQITLADSSVLSYQYDPAHRLTGVTDTQGNKISYTLDNAGNR 667 Query: 527 -PTSVIDPRGNNVRYE---WTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQNGITSY 582 V DP GN R + + G+ +II +Y YD + Q++DA N +T+ Sbjct: 668 TQVKVTDPSGNLARQQNRAYDQLGRLQQIIGMSGQSYTYQYDANGNLTQISDALNRVTTN 727 Query: 583 LYDAAGRLKEKLLPNKGQSTYSYDGAGQLLEMKHTAPGGALLEQLTYVYDPAGNKIRSER 642 YD RL +K+ P G S Y YD LL+QLT V DP K+ ++ Sbjct: 728 QYDPLNRLIKKIDPLGGVSQYGYD----------------LLDQLTSVTDP--RKLTTKY 769 Query: 643 QEGGSDEDNPAGTPRPADIADYAYDALNQLVQVQKQNGSRVVYSYDTVGNRLGKETTGAG 702 G +P + + Y YDA +++Q+ Y YD + NRL T Sbjct: 770 TLDGLGNRTEVNSPDSGN-SSYVYDAAGRMIQMTDARKVTATYQYDAL-NRL-TTITYPD 826 Query: 703 TTIKELYTYDAANKLTHFEKGSDYKDYTYDKRGNLLEVS 741 TI + L+ S Y YD +G++ +++ Sbjct: 827 QTISYAWDNKLPGYLSQISDESGTIVYDYDAKGSVKQLT 865 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 188/709 (26%), Positives = 302/709 (42%), Gaps = 105/709 (14%) Query: 5 VEEIDALGNRATYEYDTAGNL-VKSTDALG-----GVVTIARDSAGVPVSVT-------- 50 + +ID GN+ Y+YD A NL + +A G + T S +P+ + Sbjct: 428 ISKIDFNGNKTIYQYDLARNLETQRVEAYGTPQARTISTQWHPSLALPLKIASPQKLELY 487 Query: 51 --DAEGHTTAY----TNDADGFA--KEIKDPSGYTTIIERDTLHRTTKITDAEGKLQAVD 102 D G+ Y T+D+DG + + SG T + + +TD G + Sbjct: 488 TYDNGGNLLTYVVQPTSDSDGSSGLNVLGVGSGRTWAYSYNNYGQILTMTDPIGSKSQYE 547 Query: 103 YDQKDRAVAVTNALDQTSSV-TYDANGNPVEHTNEAGSKTVSNYQV--------YRLSST 153 YD K +TNA+ Q +++ YDANG + AG +Y + + +S Sbjct: 548 YDNKGNLSQITNAMGQITTLDQYDANGRVGRVISPAGVAISYSYDLRGRLVEMDFYAASN 607 Query: 154 EDALQNSTTKTYDALGRVIEAKDEAGAVTAYNYDSVGQLEEVTDAEGQSNTYTYDDNGNM 213 + Q+ T YD +G + + +V +Y YD +L VTD +G +YT D+ GN Sbjct: 608 QSDTQSKTLYRYDGVGNLTQITLADSSVLSYQYDPAHRLTGVTDTQGNKISYTLDNAGNR 667 Query: 214 LTQK--DAKGNIT---SYTYSKRNELLSVTDPLGAKTRYRYDAAGNTIKETDALGNSTYY 268 K D GN+ + Y + L + G Y+YDA GN + +DAL T Sbjct: 668 TQVKVTDPSGNLARQQNRAYDQLGRLQQIIGMSGQSYTYQYDANGNLTQISDALNRVTTN 727 Query: 269 DYNALGQLVKVTDALGAVTEYQYDKNGNQVAVIDPNHSIWTTKYDSRSLDAGT-IN-PLK 326 Y+ L +L+K D LG V++Y YD +V DP TTKY L T +N P Sbjct: 728 QYDPLNRLIKKIDPLGGVSQYGYDLLDQLTSVTDPRK--LTTKYTLDGLGNRTEVNSPDS 785 Query: 327 EETAVTRNARGLMTEFLDAAGQKTTYEYDALGRNTRVR-----------NAL-GYET--- 371 ++ +A G M + DA TY+YDAL R T + N L GY + Sbjct: 786 GNSSYVYDAAGRMIQMTDARKVTATYQYDALNRLTTITYPDQTISYAWDNKLPGYLSQIS 845 Query: 372 ------IYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGNLLD 425 +Y YDA+G+V+++ TY G +YSY+++G L Sbjct: 846 DESGTIVYDYDAKGSVKQLTQTIPASGGITY------------PGLNVQYSYNSAGQALQ 893 Query: 426 KTNALGAVTSYRYDTLNRVIESVN----PLQEITSLAYDENGNLQKVTEPDSNTTVYAYN 481 + G SY+Y N V+ ++ PL ++++AY G ++ S V + Sbjct: 894 QLLPSGQKLSYKYQ--NGVVTEIDLGDKPL--VSNIAYFPLGGVRSYQYNGSQVFVRTQD 949 Query: 482 KGNQVEQIQYGNDLTVKYKYDLAGRRSLMTDSTGDTR---YTYDALNRPTSVIDPRGNNV 538 +V I V+ YD R + ++D+ +R Y+YD L+ V ++ Sbjct: 950 SDGRVSSITSPVMNKVQ-SYDTVDRLTQVSDALSPSRTQSYSYDKLDH-LQVHTLGASSW 1007 Query: 539 RYEWTATGQRSRIIYPDNTVVSYDYDKLDRIKQVTDAQNGITSYLYDAAGRLKEKLLPNK 598 Y++ G R++ NTV +R++QV Q SYL D + N Sbjct: 1008 SYQYDINGNRTQTTTNGNTVALQMEGSSNRLQQVGSQQ---YSYLADGSQS-------ND 1057 Query: 599 GQSTYSYDGAGQLLEMKH--------TAPGGALLEQLT-YVYDPAGNKI 638 G + +Y+GAG+L + H +A G +++ T Y+YD G+ + Sbjct: 1058 GSRSDTYNGAGRLSKTVHGDATTYLYSASGQRMVKNSTRYIYDQWGHLL 1106 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 122/489 (24%), Positives = 195/489 (39%), Gaps = 92/489 (18%) Query: 9 DALGNRATYEYDTAGNL--VKSTDALGGVV---TIARDSAGVPVSVTDAEGHTTAYTNDA 63 D GN+ +Y D AGN VK TD G + A D G + G + Y DA Sbjct: 651 DTQGNKISYTLDNAGNRTQVKVTDPSGNLARQQNRAYDQLGRLQQIIGMSGQSYTYQYDA 710 Query: 64 DGFAKEIKDPSGYTTIIERDTLHRTTKITDAEGKLQAVDYDQKDRAVAVTNALDQTSSVT 123 +G +I D T + D L+R K D G + YD D+ +VT+ T+ T Sbjct: 711 NGNLTQISDALNRVTTNQYDPLNRLIKKIDPLGGVSQYGYDLLDQLTSVTDPRKLTTKYT 770 Query: 124 YDANGNPVE-HTNEAGSKTVSNYQVYRLSSTEDALQNSTTKTYDALGRVI---------- 172 D GN E ++ ++G+ + R+ DA + + T YDAL R+ Sbjct: 771 LDGLGNRTEVNSPDSGNSSYVYDAAGRMIQMTDARKVTATYQYDALNRLTTITYPDQTIS 830 Query: 173 ------------EAKDEAGAVTAYNYDSVGQLEEVTDA---------EGQSNTYTYDDNG 211 + DE+G + Y+YD+ G ++++T G + Y+Y+ G Sbjct: 831 YAWDNKLPGYLSQISDESGTI-VYDYDAKGSVKQLTQTIPASGGITYPGLNVQYSYNSAG 889 Query: 212 NMLTQKDAKGNITSYTYSKRNELLSVTD-------------PLGAKTRYRYDAAGNTIKE 258 L Q G SY Y +N +++ D PLG Y+Y+ + ++ Sbjct: 890 QALQQLLPSGQKLSYKY--QNGVVTEIDLGDKPLVSNIAYFPLGGVRSYQYNGSQVFVRT 947 Query: 259 TDALGNST---------YYDYNALGQLVKVTDALGA--VTEYQYDKNGNQVAVIDPNHSI 307 D+ G + Y+ + +L +V+DAL Y YDK + + V S Sbjct: 948 QDSDGRVSSITSPVMNKVQSYDTVDRLTQVSDALSPSRTQSYSYDKL-DHLQVHTLGASS 1006 Query: 308 WTTKYDSRSLDAGTINPLKEETAVTRNARGLMTE-----FLDAAGQKTTYEYDALGRNTR 362 W+ +YD IN + +T N L E Q+ +Y D N Sbjct: 1007 WSYQYD--------INGNRTQTTTNGNTVALQMEGSSNRLQQVGSQQYSYLADGSQSNDG 1058 Query: 363 VRNALGYETIYAYDAQGNVEKIVNANHHETAFTYDPLGRLTEVKNAEGSTTKYSYDASGN 422 R+ Y+ G + K V+ + T + Y G+ VKN+ T+Y YD G+ Sbjct: 1059 SRSD-------TYNGAGRLSKTVHGD--ATTYLYSASGQRM-VKNS----TRYIYDQWGH 1104 Query: 423 LLDKTNALG 431 LL + + +G Sbjct: 1105 LLGEYSLMG 1113 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.310 0.129 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,918,883,654 Number of extensions: 83791019 Number of successful extensions: 191918 Number of sequences better than 1.0e-05: 254 Number of HSP's gapped: 177742 Number of HSP's successfully gapped: 1136 Length of query: 1310 Length of database: 757,237,578 Length adjustment: 138 Effective length of query: 1172 Effective length of database: 382,553,916 Effective search space: 448353189552 Effective search space used: 448353189552 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 132 (55.5 bits)