BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0427.0012.p (455 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_244334.1| BH3467~unknown conserved protein [Bacillus halo... 689 0.0 ref|NP_981409.1| conserved hypothetical protein [Bacillus cereus... 672 0.0 ref|NP_653446.1| UPF0051, Uncharacterized protein family (UPF005... 670 0.0 ref|NP_693297.1| hypothetical protein OB2376 [Oceanobacillus ihe... 665 0.0 ref|NP_834650.1| ABC transporter-associated protein [Bacillus ce... 664 0.0 >ref|NP_244334.1| BH3467~unknown conserved protein [Bacillus halodurans] pir||C84083 hypothetical protein BH3467 [imported] - Bacillus halodurans (strain C-125) dbj|BAB07186.1| BH3467~unknown conserved protein [Bacillus halodurans] Length = 465 Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/430 (73%), Positives = 375/430 (87%) Query: 1 MAKNAPDMGDYKYGFRDGHQSVFQSGKGLTPEIVREISRIKEEPEWMLEFRLKALEQFYK 60 MAK P++G+YKYGF D S+F+S +GLT EIV EISR+K+EP+WML+FRLK+LEQFYK Sbjct: 1 MAKKMPEIGEYKYGFSDRDVSIFRSKRGLTREIVEEISRMKQEPQWMLDFRLKSLEQFYK 60 Query: 61 MPMPRWGADLDGLNLEDIQYYVRPSEKQGKTWEEVPAEIKATFDKLGIPEAEQKFLAGVS 120 MPMP+WG DL L+ +DI YYV+PSEK ++W+EVP EIK TFDKLGIPEAEQK+LAGVS Sbjct: 61 MPMPQWGGDLTELDFDDITYYVKPSEKSERSWDEVPEEIKNTFDKLGIPEAEQKYLAGVS 120 Query: 121 AQYESEVVYHSMRQDLEEQGVVFLDTDTALKQYPELFKEYFGTIIPPADNKFAALNSAVW 180 AQYESEVVYH+M++DLEE G++F DTD+ALK+ ++FKEYFGTIIPP DNKFAALNSAVW Sbjct: 121 AQYESEVVYHNMKEDLEELGIIFKDTDSALKENEDIFKEYFGTIIPPTDNKFAALNSAVW 180 Query: 181 SGGSFVYVPKGVQCEVPIQGYFRINSENMGQFERTLIIADEGSFIHYVEGCTAPIYSTSS 240 SGGSF+YVPKGV+ E P+Q YFRINSENMGQFERTLIIADE S +HYVEGCTAP+Y+T+S Sbjct: 181 SGGSFIYVPKGVKTETPLQAYFRINSENMGQFERTLIIADEDSSVHYVEGCTAPVYTTNS 240 Query: 241 LHSGVIEIICRKDSRVRYTTIQNWAPNIYNLVTQRAVAEENATMEWVDGNIGSKVTMKYP 300 LHS V+EII +KD+ RYTTIQNWAPN+YNLVT+RAVA ENATMEW+DGNIGSK+TMKYP Sbjct: 241 LHSAVVEIIVKKDAYCRYTTIQNWAPNVYNLVTKRAVAYENATMEWIDGNIGSKLTMKYP 300 Query: 301 AVLLKGRGAKGSILSIAVAGKEQHQDAGAKVIHLAPDXXXXXXXXXXXXQGGKVSYRGLS 360 AV++KG GAKG+ILSIA+AGK QHQDAGAKV+HLAP+ QGGKVSYRG++ Sbjct: 301 AVIMKGEGAKGTILSIAIAGKGQHQDAGAKVLHLAPNCSSTIVSKSISKQGGKVSYRGIA 360 Query: 361 SFSRNSAGSKSNIKCDTLILDNLSTSDTVPYNEIKNDQITLEHEATVSKVSEEQLFYLMS 420 F R S GSKS I+CDTLI+DN STSDT+PYNEI N+ ITLEHEATVSKVSE+QLFYLMS Sbjct: 361 HFGRKSQGSKSKIECDTLIMDNESTSDTIPYNEILNNDITLEHEATVSKVSEDQLFYLMS 420 Query: 421 RGLTEEEATQ 430 RG++EEEAT+ Sbjct: 421 RGISEEEATE 430 >ref|NP_981409.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] gb|AAS44017.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] Length = 465 Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust. Identities = 304/430 (70%), Positives = 371/430 (86%) Query: 1 MAKNAPDMGDYKYGFRDGHQSVFQSGKGLTPEIVREISRIKEEPEWMLEFRLKALEQFYK 60 MAK PD+GDYKYGF+D S+F++G+GLT EIV EISR+KEEP+WML+FRLK+L++FY+ Sbjct: 1 MAKQLPDIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYE 60 Query: 61 MPMPRWGADLDGLNLEDIQYYVRPSEKQGKTWEEVPAEIKATFDKLGIPEAEQKFLAGVS 120 MPMP+WG DL+ L+ ++I YYV+PSEK K+W+EVP EIKATFDKLGIPEAEQK+LAGVS Sbjct: 61 MPMPQWGGDLNDLDFDEITYYVKPSEKSEKSWDEVPDEIKATFDKLGIPEAEQKYLAGVS 120 Query: 121 AQYESEVVYHSMRQDLEEQGVVFLDTDTALKQYPELFKEYFGTIIPPADNKFAALNSAVW 180 AQYESEVVYH+M++DLE G+VF DTD+ALK+ ++F+E+FG +IPP DNKFAALNSAVW Sbjct: 121 AQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFAALNSAVW 180 Query: 181 SGGSFVYVPKGVQCEVPIQGYFRINSENMGQFERTLIIADEGSFIHYVEGCTAPIYSTSS 240 SGGSF+YVPKGV+ + P+Q YFRINSENMGQFERTLII DEG+ +HYVEGCTAP+Y+T+S Sbjct: 181 SGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS 240 Query: 241 LHSGVIEIICRKDSRVRYTTIQNWAPNIYNLVTQRAVAEENATMEWVDGNIGSKVTMKYP 300 LHS V+EII +KD+ RYTTIQNWA N+YNLVT+RAV EENATMEW+DGNIGSK+TMKYP Sbjct: 241 LHSAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYP 300 Query: 301 AVLLKGRGAKGSILSIAVAGKEQHQDAGAKVIHLAPDXXXXXXXXXXXXQGGKVSYRGLS 360 AV+LKG GA+G LSIA+AGK QHQDAGAK+IHLAP+ GGKV+YRG+ Sbjct: 301 AVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIV 360 Query: 361 SFSRNSAGSKSNIKCDTLILDNLSTSDTVPYNEIKNDQITLEHEATVSKVSEEQLFYLMS 420 F + S+SNI+CDTLI+DN STSDT+PYNEIKND ++LEHEA VSKVSEEQLFYLMS Sbjct: 361 HFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMS 420 Query: 421 RGLTEEEATQ 430 RG++E+EAT+ Sbjct: 421 RGISEQEATE 430 >ref|NP_653446.1| UPF0051, Uncharacterized protein family (UPF0051) [Bacillus anthracis A2012] ref|NP_847395.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gb|AAP28881.1| conserved hypothetical protein [Bacillus anthracis str. Ames] Length = 465 Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 302/430 (70%), Positives = 371/430 (86%) Query: 1 MAKNAPDMGDYKYGFRDGHQSVFQSGKGLTPEIVREISRIKEEPEWMLEFRLKALEQFYK 60 MAK PD+GDYKYGF+D S+F++G+GLT EIV EISR+KEEP+WML+FRLK+L++FY+ Sbjct: 1 MAKQLPDIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYE 60 Query: 61 MPMPRWGADLDGLNLEDIQYYVRPSEKQGKTWEEVPAEIKATFDKLGIPEAEQKFLAGVS 120 MPMP+WG DL+ L+ ++I YYV+PSEK K+W+EVP EIKATFDKLGIPEAEQK+LAGVS Sbjct: 61 MPMPQWGGDLNDLDFDEITYYVKPSEKSEKSWDEVPDEIKATFDKLGIPEAEQKYLAGVS 120 Query: 121 AQYESEVVYHSMRQDLEEQGVVFLDTDTALKQYPELFKEYFGTIIPPADNKFAALNSAVW 180 AQYESEVVYH+M++DLE G+VF DTD+ALK+ ++F+E+FG +IPP DNKF+ALNSAVW Sbjct: 121 AQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNSAVW 180 Query: 181 SGGSFVYVPKGVQCEVPIQGYFRINSENMGQFERTLIIADEGSFIHYVEGCTAPIYSTSS 240 SGGSF+YVPKGV+ + P+Q YFRINSENMGQFERTLII DEG+ +HYVEGCTAP+Y+T+S Sbjct: 181 SGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS 240 Query: 241 LHSGVIEIICRKDSRVRYTTIQNWAPNIYNLVTQRAVAEENATMEWVDGNIGSKVTMKYP 300 LHS V+EII +KD+ RYTTIQNWA N+YNLVT+RAV EENATMEW+DGN+GSK+TMKYP Sbjct: 241 LHSAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGNLGSKLTMKYP 300 Query: 301 AVLLKGRGAKGSILSIAVAGKEQHQDAGAKVIHLAPDXXXXXXXXXXXXQGGKVSYRGLS 360 AV+LKG GA+G LSIA+AGK QHQDAGAK+IHLAP+ GGKV+YRG+ Sbjct: 301 AVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIV 360 Query: 361 SFSRNSAGSKSNIKCDTLILDNLSTSDTVPYNEIKNDQITLEHEATVSKVSEEQLFYLMS 420 F + S+SNI+CDTLI+DN STSDT+PYNEIKND ++LEHEA VSKVSEEQLFYLMS Sbjct: 361 HFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMS 420 Query: 421 RGLTEEEATQ 430 RG++E+EAT+ Sbjct: 421 RGISEQEATE 430 >ref|NP_693297.1| hypothetical protein OB2376 [Oceanobacillus iheyensis HTE831] dbj|BAC14332.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 465 Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust. Identities = 304/430 (70%), Positives = 366/430 (85%) Query: 1 MAKNAPDMGDYKYGFRDGHQSVFQSGKGLTPEIVREISRIKEEPEWMLEFRLKALEQFYK 60 MAKN P++ +YKYGF D S+F++ KGLTP +V EIS++KEEPEWMLE+RLK+LE FY Sbjct: 1 MAKNMPEIDEYKYGFHDKDVSIFRTEKGLTPRVVEEISKMKEEPEWMLEYRLKSLEHFYN 60 Query: 61 MPMPRWGADLDGLNLEDIQYYVRPSEKQGKTWEEVPAEIKATFDKLGIPEAEQKFLAGVS 120 PMP+WG DL GL+ ++I YYV+PSEKQG+TW+EVP EIK TFDKLGIPEAEQK+LAGVS Sbjct: 61 RPMPQWGGDLSGLDFDEIVYYVKPSEKQGRTWDEVPEEIKQTFDKLGIPEAEQKYLAGVS 120 Query: 121 AQYESEVVYHSMRQDLEEQGVVFLDTDTALKQYPELFKEYFGTIIPPADNKFAALNSAVW 180 AQYESEVVYHS+++DL++ G++F DTDTALK+ ELFKEYFG +IP +DNKF+ALNSAVW Sbjct: 121 AQYESEVVYHSLKEDLQDLGIIFKDTDTALKENEELFKEYFGKVIPYSDNKFSALNSAVW 180 Query: 181 SGGSFVYVPKGVQCEVPIQGYFRINSENMGQFERTLIIADEGSFIHYVEGCTAPIYSTSS 240 SGGSF+YVPKGV+ P+Q YFRINSENMGQFERTLII DEG+ +HYVEGCTAP+Y+T+S Sbjct: 181 SGGSFIYVPKGVEATTPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNS 240 Query: 241 LHSGVIEIICRKDSRVRYTTIQNWAPNIYNLVTQRAVAEENATMEWVDGNIGSKVTMKYP 300 LHS V+EII +KD+ RYTTIQNWA N+YNLVT+RA + NATMEW+DGNIGSK+TMKYP Sbjct: 241 LHSAVVEIIVKKDAYCRYTTIQNWANNVYNLVTKRATCDANATMEWIDGNIGSKLTMKYP 300 Query: 301 AVLLKGRGAKGSILSIAVAGKEQHQDAGAKVIHLAPDXXXXXXXXXXXXQGGKVSYRGLS 360 A+LLKG GA+G+ LSIA+AGK Q QDAGAK+ HLAP+ QGGKVSYRGL Sbjct: 301 AILLKGEGARGNTLSIALAGKGQLQDAGAKMHHLAPNTSSTIVSKSISKQGGKVSYRGLV 360 Query: 361 SFSRNSAGSKSNIKCDTLILDNLSTSDTVPYNEIKNDQITLEHEATVSKVSEEQLFYLMS 420 F R + G+++NI+CDTLI+DN STSDT+PYNEI ND I+LEHEA VSKVSEEQLFYLMS Sbjct: 361 HFGRKADGARANIECDTLIMDNESTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMS 420 Query: 421 RGLTEEEATQ 430 RGL+EEEAT+ Sbjct: 421 RGLSEEEATE 430 >ref|NP_834650.1| ABC transporter-associated protein [Bacillus cereus ATCC 14579] gb|AAP11851.1| ABC transporter-associated protein [Bacillus cereus ATCC 14579] Length = 465 Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 300/430 (69%), Positives = 369/430 (85%) Query: 1 MAKNAPDMGDYKYGFRDGHQSVFQSGKGLTPEIVREISRIKEEPEWMLEFRLKALEQFYK 60 MAK PD+GDYKYGF+D S+F++G+GLT EIV EISR+KEEP+WML+FRLK+L++FY+ Sbjct: 1 MAKQLPDIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYE 60 Query: 61 MPMPRWGADLDGLNLEDIQYYVRPSEKQGKTWEEVPAEIKATFDKLGIPEAEQKFLAGVS 120 MPMP+WG DL+ L+ ++I YYV+PSEK K+W+EVP EIKATFDKLGIPEAEQK+LAGVS Sbjct: 61 MPMPQWGGDLNDLDFDEITYYVKPSEKSEKSWDEVPDEIKATFDKLGIPEAEQKYLAGVS 120 Query: 121 AQYESEVVYHSMRQDLEEQGVVFLDTDTALKQYPELFKEYFGTIIPPADNKFAALNSAVW 180 AQYESEVVYH+M++DLE G+VF DTD+ALK+ ++F+E+FG +IPP DNKF+ALNSAVW Sbjct: 121 AQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNSAVW 180 Query: 181 SGGSFVYVPKGVQCEVPIQGYFRINSENMGQFERTLIIADEGSFIHYVEGCTAPIYSTSS 240 SGGSF+YVPKGV+ + P+Q YFRINSENMGQFERTLII DEG+ +HYVEGCTAP+Y+T+S Sbjct: 181 SGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS 240 Query: 241 LHSGVIEIICRKDSRVRYTTIQNWAPNIYNLVTQRAVAEENATMEWVDGNIGSKVTMKYP 300 LHS V+EII +KD+ RYTTIQNWA N+YNLVT+RAV EENATMEW+DG+IGSK+TMKYP Sbjct: 241 LHSAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGDIGSKLTMKYP 300 Query: 301 AVLLKGRGAKGSILSIAVAGKEQHQDAGAKVIHLAPDXXXXXXXXXXXXQGGKVSYRGLS 360 AV+LKG GA+G SIA+AGK QHQDAGAK+I LAP+ GGKV+YRG+ Sbjct: 301 AVILKGEGARGLTSSIAIAGKGQHQDAGAKMIQLAPNTSSTIVSKSIAKHGGKVTYRGIV 360 Query: 361 SFSRNSAGSKSNIKCDTLILDNLSTSDTVPYNEIKNDQITLEHEATVSKVSEEQLFYLMS 420 F + S+SNI+CDTLI+DN STSDT+PYNEIKND ++LEHEA VSKVSEEQLFYLMS Sbjct: 361 HFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMS 420 Query: 421 RGLTEEEATQ 430 RG++E+EAT+ Sbjct: 421 RGISEQEATE 430 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.315 0.133 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 647,662,325 Number of extensions: 26913073 Number of successful extensions: 64219 Number of sequences better than 1.0e-05: 910 Number of HSP's gapped: 62803 Number of HSP's successfully gapped: 915 Length of query: 455 Length of database: 757,237,578 Length adjustment: 129 Effective length of query: 326 Effective length of database: 406,989,807 Effective search space: 132678677082 Effective search space used: 132678677082 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 128 (53.9 bits)