BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0422.0001.p
         (91 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_244583.1| galactosyltransferase [Bacillus halodurans] >gi...    84   1e-15
gb|AAF18949.1| Cps9F [Streptococcus suis]                              73   2e-12
gb|AAS60265.1| glycosyltransferase [Francisella tularensis subsp...    71   8e-12
ref|ZP_00151983.1| hypothetical protein Daro014701 [Dechloromona...    65   5e-10
ref|ZP_00079728.1| COG2148: Sugar transferases involved in lipop...    64   8e-10

>ref|NP_244583.1| galactosyltransferase [Bacillus halodurans]
 pir||D84114 galactosyltransferase BH3716 [imported] - Bacillus halodurans
           (strain C-125)
 dbj|BAB07435.1| galactosyltransferase [Bacillus halodurans]
          Length = 207

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/55 (74%), Positives = 44/55 (80%)

Query: 1   LTGWAQINGRDELPIEEKAKLDGEYTVNITFIFDLKVFVRTVLSVLKSDGVREGA 55
           LTGWAQINGRDELPIE KAKLDGEY  NI F  D+K FV T+ SVL+SDGV EG 
Sbjct: 139 LTGWAQINGRDELPIEVKAKLDGEYVQNIGFWMDVKCFVGTIWSVLRSDGVVEGG 193


>gb|AAF18949.1| Cps9F [Streptococcus suis]
          Length = 200

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 43/58 (74%)

Query: 1   LTGWAQINGRDELPIEEKAKLDGEYTVNITFIFDLKVFVRTVLSVLKSDGVREGADDQ 58
           LTGWAQINGRDEL I+EK+KLDG Y  N++   D+K F+ T LSV +S+GV EG   Q
Sbjct: 139 LTGWAQINGRDELEIDEKSKLDGYYVQNMSLGLDIKCFLGTFLSVARSEGVVEGGTGQ 196


>gb|AAS60265.1| glycosyltransferase [Francisella tularensis subsp. tularensis]
          Length = 205

 Score = 70.9 bits (172), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 38/55 (69%)

Query: 1   LTGWAQINGRDELPIEEKAKLDGEYTVNITFIFDLKVFVRTVLSVLKSDGVREGA 55
           LTGWAQINGRDELPI +KAKLDG+Y  N +  FDLK    TV SV    GV EG 
Sbjct: 140 LTGWAQINGRDELPIPDKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGVVEGG 194


>ref|ZP_00151983.1| hypothetical protein Daro014701 [Dechloromonas aromatica RCB]
          Length = 186

 Score = 65.1 bits (157), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 37/51 (72%)

Query: 1   LTGWAQINGRDELPIEEKAKLDGEYTVNITFIFDLKVFVRTVLSVLKSDGV 51
           LTGWAQ+NGRDELPI +K  LD EY    +F FDL++   T L V++SDGV
Sbjct: 134 LTGWAQVNGRDELPIPQKVALDVEYLRRQSFWFDLRIIWLTALKVVRSDGV 184


>ref|ZP_00079728.1| COG2148: Sugar transferases involved in lipopolysaccharide
           synthesis [Geobacter metallireducens]
          Length = 144

 Score = 64.3 bits (155), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 35/51 (68%)

Query: 1   LTGWAQINGRDELPIEEKAKLDGEYTVNITFIFDLKVFVRTVLSVLKSDGV 51
           LTGWAQINGRDELPI  K + D  Y  N +  FDLK+ + T + VL+ DGV
Sbjct: 92  LTGWAQINGRDELPIPVKVEYDAYYLQNRSLFFDLKIMILTAIKVLRRDGV 142


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.316    0.135    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 121,312,088
Number of extensions: 3921979
Number of successful extensions: 6662
Number of sequences better than 1.0e-05: 35
Number of HSP's gapped: 6671
Number of HSP's successfully gapped: 35
Length of query: 91
Length of database: 757,237,578
Length adjustment: 59
Effective length of query: 32
Effective length of database: 597,046,737
Effective search space: 19105495584
Effective search space used: 19105495584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 120 (50.8 bits)