BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0419.0005.p (186 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P29094|O16G_BACTR Oligo-1,6-glucosidase (Oligosaccharide alph... 164 7e-40 sp|P21332|O16G_BACCE Oligo-1,6-glucosidase (Oligosaccharide alph... 154 7e-37 ref|NP_833733.1| Oligo-1,6-glucosidase [Bacillus cereus ATCC 145... 154 8e-37 ref|NP_658052.1| Aamy, Alpha-amylase domain [Bacillus anthracis ... 154 8e-37 ref|NP_980360.1| oligo-1,6-glucosidase [Bacillus cereus ATCC 109... 154 8e-37 >sp|P29094|O16G_BACTR Oligo-1,6-glucosidase (Oligosaccharide alpha-1,6-glucosidase) (Sucrase-isomaltase) (Isomaltase) (Dextrin 6-alpha-D-glucanohydrolase) pir||A41707 oligo-1,6-glucosidase (EC 3.2.1.10) - Bacillus thermoglucosidasius dbj|BAA01368.1| oligo-1,6-glucosidase [Geobacillus thermoglucosidasius] Length = 562 Score = 164 bits (416), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 74/113 (65%), Positives = 92/113 (81%) Query: 2 NLDCAAPGGGKWDTVPWSLLELKKIISNWQTVLHGKGWNANYLCNHDQPRSVSRFGNDLY 61 ++D + GGKWD PWSL +LKK ++ WQ L GKGWN+ YL NHDQPR+VSRFG+D Sbjct: 284 HMDLDSGPGGKWDIRPWSLADLKKTMTKWQKELEGKGWNSLYLNNHDQPRAVSRFGDDGK 343 Query: 62 YRIPSAKMLATFIHMLEGTPYIYQGEELGMTNAGFESIDDYRDVETLNYYEEK 114 YR+ SAKMLATF+HM++GTPYIYQGEE+GMTN F SI+DYRD+ETLN Y+E+ Sbjct: 344 YRVESAKMLATFLHMMQGTPYIYQGEEIGMTNVRFPSIEDYRDIETLNMYKER 396 >sp|P21332|O16G_BACCE Oligo-1,6-glucosidase (Oligosaccharide alpha-1,6-glucosidase) (Sucrase-isomaltase) (Isomaltase) (Dextrin 6-alpha-D-glucanohydrolase) pir||S13579 oligo-1,6-glucosidase (EC 3.2.1.10) - Bacillus cereus pdb|1UOK| Crystal Structure Of B. Cereus Oligo-1,6-Glucosidase emb|CAA37583.1| unnamed protein product [Bacillus cereus] Length = 558 Score = 154 bits (390), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 73/113 (64%), Positives = 87/113 (76%) Query: 2 NLDCAAPGGGKWDTVPWSLLELKKIISNWQTVLHGKGWNANYLCNHDQPRSVSRFGNDLY 61 ++D + GGKWD P SLL LK+ ++ WQ L GWN+ Y NHDQPR VSRFGND Sbjct: 283 HMDLDSGEGGKWDVKPCSLLTLKENLTKWQKALEHTGWNSLYWNNHDQPRVVSRFGNDGM 342 Query: 62 YRIPSAKMLATFIHMLEGTPYIYQGEELGMTNAGFESIDDYRDVETLNYYEEK 114 YRI SAKMLAT +HM++GTPYIYQGEE+GMTN FESID+YRD+ETLN Y+EK Sbjct: 343 YRIESAKMLATVLHMMKGTPYIYQGEEIGMTNVRFESIDEYRDIETLNMYKEK 395 >ref|NP_833733.1| Oligo-1,6-glucosidase [Bacillus cereus ATCC 14579] gb|AAP10934.1| Oligo-1,6-glucosidase [Bacillus cereus ATCC 14579] Length = 558 Score = 154 bits (390), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 73/113 (64%), Positives = 87/113 (76%) Query: 2 NLDCAAPGGGKWDTVPWSLLELKKIISNWQTVLHGKGWNANYLCNHDQPRSVSRFGNDLY 61 ++D + GGKWD P SLL LK+ ++ WQ L GWN+ Y NHDQPR VSRFGND Sbjct: 283 HMDLDSGEGGKWDVKPCSLLTLKENLTKWQKALEHTGWNSLYWNNHDQPRVVSRFGNDGM 342 Query: 62 YRIPSAKMLATFIHMLEGTPYIYQGEELGMTNAGFESIDDYRDVETLNYYEEK 114 YRI SAKMLAT +HM++GTPYIYQGEE+GMTN FESID+YRD+ETLN Y+EK Sbjct: 343 YRIESAKMLATVLHMMKGTPYIYQGEEIGMTNVRFESIDEYRDIETLNMYKEK 395 >ref|NP_658052.1| Aamy, Alpha-amylase domain [Bacillus anthracis A2012] ref|NP_846466.1| oligo-1,6-glucosidase [Bacillus anthracis str. Ames] gb|AAP27952.1| oligo-1,6-glucosidase [Bacillus anthracis str. Ames] Length = 558 Score = 154 bits (390), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 73/113 (64%), Positives = 87/113 (76%) Query: 2 NLDCAAPGGGKWDTVPWSLLELKKIISNWQTVLHGKGWNANYLCNHDQPRSVSRFGNDLY 61 ++D + GGKWD P SLL LK+ ++ WQ L GWN+ Y NHDQPR VSRFGND Sbjct: 283 HMDLDSGEGGKWDVKPCSLLTLKENLTKWQKALEHTGWNSLYWNNHDQPRVVSRFGNDGM 342 Query: 62 YRIPSAKMLATFIHMLEGTPYIYQGEELGMTNAGFESIDDYRDVETLNYYEEK 114 YRI SAKMLAT +HM++GTPYIYQGEE+GMTN FESID+YRD+ETLN Y+EK Sbjct: 343 YRIESAKMLATVLHMMKGTPYIYQGEEIGMTNVRFESIDEYRDIETLNMYKEK 395 >ref|NP_980360.1| oligo-1,6-glucosidase [Bacillus cereus ATCC 10987] gb|AAS42968.1| oligo-1,6-glucosidase [Bacillus cereus ATCC 10987] Length = 558 Score = 154 bits (390), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 73/113 (64%), Positives = 87/113 (76%) Query: 2 NLDCAAPGGGKWDTVPWSLLELKKIISNWQTVLHGKGWNANYLCNHDQPRSVSRFGNDLY 61 ++D + GGKWD P SLL LK+ ++ WQ L GWN+ Y NHDQPR VSRFGND Sbjct: 283 HMDLDSGEGGKWDVKPCSLLTLKENLTKWQKALEHTGWNSLYWNNHDQPRVVSRFGNDGM 342 Query: 62 YRIPSAKMLATFIHMLEGTPYIYQGEELGMTNAGFESIDDYRDVETLNYYEEK 114 YRI SAKMLAT +HM++GTPYIYQGEE+GMTN FESID+YRD+ETLN Y+EK Sbjct: 343 YRIESAKMLATVLHMMKGTPYIYQGEEIGMTNVRFESIDEYRDIETLNMYKEK 395 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.138 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 277,253,253 Number of extensions: 11426509 Number of successful extensions: 17592 Number of sequences better than 1.0e-05: 174 Number of HSP's gapped: 17526 Number of HSP's successfully gapped: 174 Length of query: 186 Length of database: 757,237,578 Length adjustment: 118 Effective length of query: 68 Effective length of database: 436,855,896 Effective search space: 29706200928 Effective search space used: 29706200928 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 122 (51.6 bits)