BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0402.0002.p (646 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||S18599 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) - Ba... 696 0.0 sp|P30538|GLGB_BACST 1,4-alpha-glucan branching enzyme (Glycogen... 695 0.0 ref|ZP_00061166.1| COG0296: 1,4-alpha-glucan branching enzyme [C... 674 0.0 sp|P30537|GLGB_BACCL 1,4-alpha-glucan branching enzyme (Glycogen... 667 0.0 ref|NP_691327.1| 1,4-alpha-glucan branching enzyme [Oceanobacill... 666 0.0 >pir||S18599 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) - Bacillus stearothermophilus prf||1804332A glycogen-branching enzyme Length = 638 Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/637 (53%), Positives = 439/637 (68%), Gaps = 18/637 (2%) Query: 11 PSSDDIYLFHEGTNYRSYTMLGAHIAAEEGIPGVRFTVWAPHATYVGLAGNHNGWDGTED 70 P+ +IYLFHEG+ Y+SY + GAH+ + G+ G RF VWAPHA V L G+ N W+GT Sbjct: 5 PTDLEIYLFHEGSLYKSYELFGAHVIKKNGMVGTRFCVWAPHAREVRLVGSFNEWNGTNF 64 Query: 71 VDSLYKIPDSGFWSRFFPGMKAGTFYKYRIVGPDGSNFLKADPYAFQAEVRPATASIVAD 130 +L K+ + G W F P G YKY I DG+ LK+DPYAF +E+RP TASIV + Sbjct: 65 --NLMKVSNQGVWMIFIPENLEGHLYKYEITTNDGNVLLKSDPYAFYSELRPHTASIVYN 122 Query: 131 LDGYVWGDAALRXXXXXXXXRSRAPYNAPLNIYEMHFGTWRQKEDGGLYTYREMSELLIP 190 + GY W D R + + Y+ PL IYE+HFG+W++KEDG YTY+EM+E LIP Sbjct: 123 IKGYQWNDQTWRRKK-----QRKRIYDQPLFIYELHFGSWKKKEDGSFYTYQEMAEELIP 177 Query: 191 YLVEMSYTHVEFMPLAEHPYDLSWGYQGTGYFAATSRYGEPKDLMFLIDKLHQAGIGVLL 250 Y++E +TH+E +PL EHP+D SWGYQG GY++ATSRYG P DLM+ ID+ HQAGIGV+L Sbjct: 178 YVLEHGFTHIELLPLVEHPFDRSWGYQGIGYYSATSRYGTPHDLMYFIDRCHQAGIGVIL 237 Query: 251 DWVPAHFAKDAHGLRMFDGTPLYEYADPMLAEKPGWGTLSFDFSKPEISSFLISNALFWF 310 DWVP HF KD+HGL MFDG P YEYA+ E WGT +FD KPE+ SFLISNALFW Sbjct: 238 DWVPGHFCKDSHGLYMFDGAPAYEYANMQDRENYVWGTANFDLGKPEVRSFLISNALFWM 297 Query: 311 EMFHIDGMRVDAVTSMLRLDFEKKGHEFRRNANGGLENLEAIRFIQRLNKTIFHYYPKAL 370 E FH+DG RVDAV +ML + N++ +N A+ F+Q+LN+T+F Y P L Sbjct: 298 EYFHVDGFRVDAVANML----------YWPNSDVLYKNTYAVEFLQKLNETVFAYDPNIL 347 Query: 371 MMAEESSAWPGVTAPVHEGGLGFNYKWNMGWMNDTLGYIEHDFGARPYHHNLLTFPICYA 430 M+AE+S+ WP VTAP ++GGLGFNYKWNMGWMND L Y+E R Y HN +TF + YA Sbjct: 348 MIAEDSTDWPRVTAPTYDGGLGFNYKWNMGWMNDILTYMETPPEHRKYVHNKVTFSLLYA 407 Query: 431 YSENYTLPLSHDEVVHGKKSLLDKMPGTYEQKFAGLRLLLGYHISHPGKKLLFMGGEFGQ 490 YSEN+ LP SHDEVVHGKKSLL KMPGTYE+KFA LRLL GY ++HPGKKLLFMGGEFGQ Sbjct: 408 YSENFILPFSHDEVVHGKKSLLSKMPGTYEEKFAQLRLLYGYLLTHPGKKLLFMGGEFGQ 467 Query: 491 FIEWKDQEQLDWLLLDYESHRRMLAFTAALNKLYVNERALWELDHEMEGYQWIDADDSGQ 550 F EWKD EQLDW+L D++ HR M + L K Y + L+ELDH +G++WID ++ Q Sbjct: 468 FDEWKDLEQLDWMLFDFDMHRNMNMYVKELLKCYKRYKPLYELDHSPDGFEWIDVHNAEQ 527 Query: 551 SIVSYIRRGKRPVDTLLIIINFQPVERHMYRVGVPRPGTYEELFSSENTEFGGSG-VHNA 609 SI S+IRRGK+ D L+++ NF H Y+VGVP Y E+ +S+ +FGG G ++ Sbjct: 528 SIFSFIRRGKKEDDLLIVVCNFTNKVYHGYKVGVPLFTRYREVINSDAIQFGGFGNINPK 587 Query: 610 PMKSSKKEWHNQVNSIELTIPPLSFLVLKKAGRKAVK 646 P+ + + +H + I++TIPP +L+ + +VK Sbjct: 588 PIAAMEGPFHGKPYHIQMTIPPFGISILRPVKKGSVK 624 >sp|P30538|GLGB_BACST 1,4-alpha-glucan branching enzyme (Glycogen branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) gb|AAA22482.1| branching enzyme (glgB) (EC 2.4.1.18) [Geobacillus stearothermophilus] Length = 639 Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/637 (53%), Positives = 439/637 (68%), Gaps = 18/637 (2%) Query: 11 PSSDDIYLFHEGTNYRSYTMLGAHIAAEEGIPGVRFTVWAPHATYVGLAGNHNGWDGTED 70 P+ +IYLFHEG+ Y+SY + GAH+ + G+ G RF VWAPHA V L G+ N W+GT Sbjct: 6 PTDLEIYLFHEGSLYKSYELFGAHVIKKNGMVGTRFCVWAPHAREVRLVGSFNEWNGTNF 65 Query: 71 VDSLYKIPDSGFWSRFFPGMKAGTFYKYRIVGPDGSNFLKADPYAFQAEVRPATASIVAD 130 +L K+ + G W F P G YKY I DG+ LK+DPYAF +E+RP TASIV + Sbjct: 66 --NLMKVSNQGVWMIFIPENLEGHLYKYEITTNDGNVLLKSDPYAFYSELRPHTASIVYN 123 Query: 131 LDGYVWGDAALRXXXXXXXXRSRAPYNAPLNIYEMHFGTWRQKEDGGLYTYREMSELLIP 190 + GY W D R + + Y+ PL IYE+HFG+W++KEDG YTY+EM+E LIP Sbjct: 124 IKGYQWNDQTWRRKK-----QRKRIYDQPLFIYELHFGSWKKKEDGSFYTYQEMAEELIP 178 Query: 191 YLVEMSYTHVEFMPLAEHPYDLSWGYQGTGYFAATSRYGEPKDLMFLIDKLHQAGIGVLL 250 Y++E +TH+E +PL EHP+D SWGYQG GY++ATSRYG P DLM+ ID+ HQAGIGV+L Sbjct: 179 YVLEHGFTHIELLPLVEHPFDRSWGYQGIGYYSATSRYGTPHDLMYFIDRCHQAGIGVIL 238 Query: 251 DWVPAHFAKDAHGLRMFDGTPLYEYADPMLAEKPGWGTLSFDFSKPEISSFLISNALFWF 310 DWVP HF KD+HGL MFDG P YEYA+ E WGT +FD KPE+ SFLISNALFW Sbjct: 239 DWVPGHFCKDSHGLYMFDGAPAYEYANMQDRENYVWGTANFDLGKPEVRSFLISNALFWM 298 Query: 311 EMFHIDGMRVDAVTSMLRLDFEKKGHEFRRNANGGLENLEAIRFIQRLNKTIFHYYPKAL 370 E FH+DG RVDAV +ML + N++ +N A+ F+Q+LN+T+F Y P L Sbjct: 299 EYFHVDGFRVDAVANML----------YWPNSDVLYKNTYAVEFLQKLNETVFAYDPNIL 348 Query: 371 MMAEESSAWPGVTAPVHEGGLGFNYKWNMGWMNDTLGYIEHDFGARPYHHNLLTFPICYA 430 M+AE+S+ WP VTAP ++GGLGFNYKWNMGWMND L Y+E R Y HN +TF + YA Sbjct: 349 MIAEDSTDWPRVTAPTYDGGLGFNYKWNMGWMNDILTYMETPPEHRKYVHNKVTFSLLYA 408 Query: 431 YSENYTLPLSHDEVVHGKKSLLDKMPGTYEQKFAGLRLLLGYHISHPGKKLLFMGGEFGQ 490 YSEN+ LP SHDEVVHGKKSLL KMPGTYE+KFA LRLL GY ++HPGKKLLFMGGEFGQ Sbjct: 409 YSENFILPFSHDEVVHGKKSLLSKMPGTYEEKFAQLRLLYGYLLTHPGKKLLFMGGEFGQ 468 Query: 491 FIEWKDQEQLDWLLLDYESHRRMLAFTAALNKLYVNERALWELDHEMEGYQWIDADDSGQ 550 F EWKD EQLDW+L D++ HR M + L K Y + L+ELDH +G++WID ++ Q Sbjct: 469 FDEWKDLEQLDWMLFDFDMHRNMNMYVKELLKCYKRYKPLYELDHSPDGFEWIDVHNAEQ 528 Query: 551 SIVSYIRRGKRPVDTLLIIINFQPVERHMYRVGVPRPGTYEELFSSENTEFGGSG-VHNA 609 SI S+IRRGK+ D L+++ NF H Y+VGVP Y E+ +S+ +FGG G ++ Sbjct: 529 SIFSFIRRGKKEDDLLIVVCNFTNKVYHGYKVGVPLFTRYREVINSDAIQFGGFGNINPK 588 Query: 610 PMKSSKKEWHNQVNSIELTIPPLSFLVLKKAGRKAVK 646 P+ + + +H + I++TIPP +L+ + +VK Sbjct: 589 PIAAMEGPFHGKPYHIQMTIPPFGISILRPVKKGSVK 625 >ref|ZP_00061166.1| COG0296: 1,4-alpha-glucan branching enzyme [Clostridium thermocellum ATCC 27405] Length = 740 Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/630 (51%), Positives = 438/630 (69%), Gaps = 10/630 (1%) Query: 12 SSDDIYLFHEGTNYRSYTMLGAHIAAEEGIPGVRFTVWAPHATYVGLAGNHNGWDGTEDV 71 S D+YLF+EG +++ Y LG H +G+ G F VWAP A V + GN N WDG Sbjct: 111 SDYDLYLFNEGNHHKIYEKLGTHRMTIDGVEGTLFAVWAPCAKRVSVVGNFNQWDGRRH- 169 Query: 72 DSLYKIPDSGFWSRFFPGMKAGTFYKYRIVGPDGSNFLKADPYAFQAEVRPATASIVADL 131 + SG W F PG+ G YKY I P ++KADPYAF +E+RP TASIV D+ Sbjct: 170 -QMRVRGSSGVWELFIPGVGEGELYKYEIKTPHNEIYIKADPYAFYSELRPNTASIVYDI 228 Query: 132 DGYVWGDAALRXXXXXXXXRSRAPYNAPLNIYEMHFGTWRQ--KEDGGLYTYREMSELLI 189 +GY W DA S ++ P++IYE+H G+W++ ++ G Y+YRE++++L+ Sbjct: 229 EGYEWHDADW-----MRERDSSNSFDKPISIYEVHLGSWKRVSNDENGFYSYRELADMLV 283 Query: 190 PYLVEMSYTHVEFMPLAEHPYDLSWGYQGTGYFAATSRYGEPKDLMFLIDKLHQAGIGVL 249 Y+ M YTH+E +P+AEHP+D SWGYQ TGY+AATSRYG+PKD M+ +DK HQ GIGV+ Sbjct: 284 EYVKYMGYTHIELLPIAEHPFDGSWGYQVTGYYAATSRYGQPKDFMYFVDKCHQNGIGVI 343 Query: 250 LDWVPAHFAKDAHGLRMFDGTPLYEYADPMLAEKPGWGTLSFDFSKPEISSFLISNALFW 309 +DWVPAHF KD HGL FDGT LYE+ DP E P WGT F++ + E+ +FLI+NA+FW Sbjct: 344 IDWVPAHFPKDGHGLARFDGTALYEHYDPKQGEHPDWGTHIFNYGRNEVKNFLIANAMFW 403 Query: 310 FEMFHIDGMRVDAVTSMLRLDFEKKGHEFRRNANGGLENLEAIRFIQRLNKTIFHYYPKA 369 F+ +HIDG+RVDAV SML LD+ KK E+ N GG EN++AI F+++LN T+F Y+P Sbjct: 404 FDKYHIDGLRVDAVASMLYLDYGKKDGEWIPNRWGGKENVDAIEFMRQLNSTVFQYFPGV 463 Query: 370 LMMAEESSAWPGVTAPVHEGGLGFNYKWNMGWMNDTLGYIEHDFGARPYHHNLLTFPICY 429 +M+AEES+AW VT P + GGLGF+YKWNMGWMND L Y+ D R YH NL+TF + Y Sbjct: 464 MMIAEESTAWALVTKPPYTGGLGFSYKWNMGWMNDFLRYMSMDSVYRKYHQNLITFSLMY 523 Query: 430 AYSENYTLPLSHDEVVHGKKSLLDKMPGTYEQKFAGLRLLLGYHISHPGKKLLFMGGEFG 489 A+SEN+ L LSHDEVVHGK S+++KMPG Y QKFAGLR GY HPGKKLLFMGGEF Sbjct: 524 AFSENFILVLSHDEVVHGKCSMINKMPGDYWQKFAGLRASYGYLYGHPGKKLLFMGGEFA 583 Query: 490 QFIEWKDQEQLDWLLLDYESHRRMLAFTAALNKLYVNERALWELDHEMEGYQWIDADDSG 549 QFIEW ++ LDW LLDY+ H++M + LNKLY +E+AL+E+D +G++WID +D+ Sbjct: 584 QFIEWNYKQSLDWFLLDYDMHKKMQDYVRDLNKLYRSEKALYEVDFHYDGFEWIDCNDTE 643 Query: 550 QSIVSYIRRGKRPVDTLLIIINFQPVERHMYRVGVPRPGTYEELFSSENTEFGGSGVHN- 608 SI+S++R+GK ++L+ + NF PV YR+G P TY+E+F+S+ ++GGS V N Sbjct: 644 HSIISFMRKGKDWHNSLIFVCNFTPVPHEDYRIGSPFNTTYDEIFNSDWEKYGGSNVGNF 703 Query: 609 APMKSSKKEWHNQVNSIELTIPPLSFLVLK 638 P+K+ + HN+ S+ L IPPL+ +VLK Sbjct: 704 EPIKAEEISMHNKPYSMRLRIPPLATIVLK 733 >sp|P30537|GLGB_BACCL 1,4-alpha-glucan branching enzyme (Glycogen branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) pir||B56639 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) - Bacillus caldolyticus emb|CAA78440.1| 1,4-alpha-glucan branching enzyme [Bacillus caldolyticus] Length = 666 Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/637 (51%), Positives = 424/637 (66%), Gaps = 18/637 (2%) Query: 11 PSSDDIYLFHEGTNYRSYTMLGAHIAAEEGIPGVRFTVWAPHATYVGLAGNHNGWDGTED 70 P+ ++YLFHEG Y+SY + GAH+ G G RF VWAPHA V L G+ N W+GT Sbjct: 6 PTDLEVYLFHEGRLYQSYELFGAHVIRGGGAVGTRFCVWAPHAREVRLVGSFNDWNGTNS 65 Query: 71 VDSLYKIPDSGFWSRFFPGMKAGTFYKYRIVGPDGSNFLKADPYAFQAEVRPATASIVAD 130 L K+ D G W+ P G YKY I+ PDG LKADPYAF +E+RP TASIV D Sbjct: 66 --PLTKVNDEGVWTIVVPENLEGHLYKYEIITPDGRVLLKADPYAFYSELRPHTASIVYD 123 Query: 131 LDGYVWGDAALRXXXXXXXXRSRAPYNAPLNIYEMHFGTWRQKEDGGLYTYREMSELLIP 190 L GY W D+ + R + Y+ P+ IYE+HFG+W++K DG YTYREM++ LIP Sbjct: 124 LKGYEWNDSPWQRKK-----RRKRIYDQPMVIYELHFGSWKKKPDGRFYTYREMADELIP 178 Query: 191 YLVEMSYTHVEFMPLAEHPYDLSWGYQGTGYFAATSRYGEPKDLMFLIDKLHQAGIGVLL 250 Y++E +TH+E +PL EHP D SWGYQGTGY++ TSRYG P D M+ +D+ HQAG+GV++ Sbjct: 179 YVLERGFTHIELLPLVEHPLDRSWGYQGTGYYSVTSRYGTPHDFMYFVDRCHQAGLGVII 238 Query: 251 DWVPAHFAKDAHGLRMFDGTPLYEYADPMLAEKPGWGTLSFDFSKPEISSFLISNALFWF 310 DWVP HF KDAHGL MFDG P YEYA+ E WGT +FD KPE+ SFLISNALFW Sbjct: 239 DWVPGHFCKDAHGLYMFDGAPTYEYANEKDRENYVWGTANFDLGKPEVRSFLISNALFWL 298 Query: 311 EMFHIDGMRVDAVTSMLRLDFEKKGHEFRRNANGGLENLEAIRFIQRLNKTIFHYYPKAL 370 E +H+DG RVDAV +ML + N + EN A+ F+++LN+ +F Y P Sbjct: 299 EYYHVDGFRVDAVANML----------YWPNNDRLYENPYAVEFLRQLNEAVFAYDPNVW 348 Query: 371 MMAEESSAWPGVTAPVHEGGLGFNYKWNMGWMNDTLGYIEHDFGARPYHHNLLTFPICYA 430 M+AE+S+ WP VTAP ++GGLGFNYKWNMGWMND L Y+E R Y HN ++F + YA Sbjct: 349 MIAEDSTDWPRVTAPTYDGGLGFNYKWNMGWMNDMLKYMETPPHERKYAHNQVSFSLLYA 408 Query: 431 YSENYTLPLSHDEVVHGKKSLLDKMPGTYEQKFAGLRLLLGYHISHPGKKLLFMGGEFGQ 490 YSEN+ LP SHDEVVHGKKSLL+KMPG+YE+KFA LRLL GY ++HPGKKLLFMG EF Q Sbjct: 409 YSENFILPFSHDEVVHGKKSLLNKMPGSYEEKFAQLRLLYGYMMAHPGKKLLFMGSEFAQ 468 Query: 491 FIEWKDQEQLDWLLLDYESHRRMLAFTAALNKLYVNERALWELDHEMEGYQWIDADDSGQ 550 F EWK E+LDW+L D+E HR+M + L Y + +ELDH+ G++WID ++ Q Sbjct: 469 FDEWKFAEELDWVLFDFELHRKMDEYVKQLIACYKRYKPFYELDHDPRGFEWIDVHNAEQ 528 Query: 551 SIVSYIRRGKRPVDTLLIIINFQPVERHMYRVGVPRPGTYEELFSSENTEFGGSG-VHNA 609 SI S+IRRGK+ D L+I+ NF Y+V VP Y E+ +S+ EFGGSG V+ Sbjct: 529 SIFSFIRRGKKEGDVLVIVCNFTNQAYDDYKVSVPLLAPYREVLNSDAAEFGGSGHVNGK 588 Query: 610 PMKSSKKEWHNQVNSIELTIPPLSFLVLKKAGRKAVK 646 + + + +H + + +TIPP +L+ ++ + Sbjct: 589 RLPAFSEPFHGKPYHVRMTIPPFGISILRPVQKRGER 625 >ref|NP_691327.1| 1,4-alpha-glucan branching enzyme [Oceanobacillus iheyensis HTE831] sp|Q8CZE8|GLGB_OCEIH 1,4-alpha-glucan branching enzyme (Glycogen branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) dbj|BAC12362.1| 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) [Oceanobacillus iheyensis HTE831] Length = 637 Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/629 (51%), Positives = 423/629 (67%), Gaps = 9/629 (1%) Query: 12 SSDDIYLFHEGTNYRSYTMLGAHIAAEEGIPGVRFTVWAPHATYVGLAGNHNGWDGTEDV 71 S++DIYLFH+GTN+ S+ LG H +G G RF VWAP+A V + G+ N W+ E+ Sbjct: 5 SAEDIYLFHQGTNFESHQFLGCHEINWKGKRGYRFAVWAPNALKVCVVGDFNNWE--ENS 62 Query: 72 DSLYKIPDSGFWSRFFPGMKAGTFYKYRIVGPDGSNFLKADPYAFQAEVRPATASIVADL 131 L K D G W F + T YKY I + ++ LKADP+A QAE RP TAS++ Sbjct: 63 HPLEKFTDEGLWGGFIADIPPATSYKYHICSSEDTSILKADPFATQAERRPKTASVIPAA 122 Query: 132 DGYVWGDAALRXXXXXXXXRSRAPYNAPLNIYEMHFGTWRQKEDGGLYTYREMSELLIPY 191 +GY W D + PY++P++IYE+H GTW++ +YRE++ LIPY Sbjct: 123 NGYQWSDDQW-----IEQRNTYDPYSSPISIYEVHLGTWKKTLKKQFLSYRELATQLIPY 177 Query: 192 LVEMSYTHVEFMPLAEHPYDLSWGYQGTGYFAATSRYGEPKDLMFLIDKLHQAGIGVLLD 251 + + YTH+E +P+ EHP+D SWGYQ TGYFA TSRYG P D + ID+ HQ IGV+LD Sbjct: 178 VKSLGYTHIELLPINEHPFDRSWGYQITGYFAVTSRYGNPSDFKYFIDQCHQHQIGVILD 237 Query: 252 WVPAHFAKDAHGLRMFDGTPLYEYADPMLAEKPGWGTLSFDFSKPEISSFLISNALFWFE 311 WVP HF KD GLR FDG PLYEY DP +EK WGTL+FD+ +PE+ SFLISNA++W + Sbjct: 238 WVPGHFCKDDFGLRQFDGAPLYEYRDPKKSEKKSWGTLAFDYGRPEVQSFLISNAIYWLK 297 Query: 312 MFHIDGMRVDAVTSMLRLDFEKKGHEFR-RNANGGLENLEAIRFIQRLNKTIFHYYPKAL 370 FHIDG+RVDAV SML L+F++ E + N GG ENLEA F+++LNK +F Y P AL Sbjct: 298 EFHIDGLRVDAVASMLYLNFDRYDEEEKIYNTYGGEENLEAFAFLRKLNKVVFSYIPGAL 357 Query: 371 MMAEESSAWPGVTAPVHEGGLGFNYKWNMGWMNDTLGYIEHDFGARPYHHNLLTFPICYA 430 MMAE+SS P VTAPV++GGLGFNYKWNMGWMND L ++E + R +HHN LTF Y Sbjct: 358 MMAEDSSDLPLVTAPVNKGGLGFNYKWNMGWMNDLLSFMEKESIHRKWHHNRLTFSFMYT 417 Query: 431 YSENYTLPLSHDEVVHGKKSLLDKMPGTYEQKFAGLRLLLGYHISHPGKKLLFMGGEFGQ 490 YSENY LPLSHDEVVHGKKSLLDKMPG Q+FA LRLL GY +HPGKKL+FMGGE Q Sbjct: 418 YSENYLLPLSHDEVVHGKKSLLDKMPGDQWQQFANLRLLYGYMYTHPGKKLVFMGGELAQ 477 Query: 491 FIEWKDQEQLDWLLLDYESHRRMLAFTAALNKLYVNERALWELDHEMEGYQWIDADDSGQ 550 + EWKD E+LDW LL+Y H+ + + LN+LY L+ELDH EG++WID + Q Sbjct: 478 YAEWKDTEELDWHLLEYPLHKGIYHYIKNLNELYQQHPELYELDHLSEGFEWIDPHNIDQ 537 Query: 551 SIVSYIRRGKRPVDTLLIIINFQPVERHMYRVGVPRPGTYEELFSSENTEFGGSG-VHNA 609 S++++ R+ +P L+II NF P Y++GVP G Y+E+F+S++ FGGSG ++ Sbjct: 538 SVIAFRRKANKPNQELIIICNFTPQVHFDYKIGVPESGRYKEIFNSDSVRFGGSGQINEG 597 Query: 610 PMKSSKKEWHNQVNSIELTIPPLSFLVLK 638 S ++WH I++ +PPL+ V + Sbjct: 598 EHFSFPEKWHGLSQHIKIKVPPLAISVFQ 626 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.321 0.139 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,056,890,419 Number of extensions: 47414666 Number of successful extensions: 90345 Number of sequences better than 1.0e-05: 443 Number of HSP's gapped: 89371 Number of HSP's successfully gapped: 444 Length of query: 646 Length of database: 757,237,578 Length adjustment: 132 Effective length of query: 514 Effective length of database: 398,844,510 Effective search space: 205006078140 Effective search space used: 205006078140 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 129 (54.3 bits)