BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0386.0010.p (240 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00018096.1| hypothetical protein [Chloroflexus aurantiacus] 170 3e-41 gb|EAJ06770.1| unknown [environmental sequence] 167 2e-40 gb|EAB50221.1| unknown [environmental sequence] 166 5e-40 gb|EAK46848.1| unknown [environmental sequence] 157 2e-37 gb|EAK13014.1| unknown [environmental sequence] 157 2e-37 >ref|ZP_00018096.1| hypothetical protein [Chloroflexus aurantiacus] Length = 393 Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 97/230 (42%), Positives = 135/230 (58%), Gaps = 12/230 (5%) Query: 1 MSSTELSL--LEISYLPLIEYGAAWELQKAAVQAIDAGTGPERLILLQHPPTYTIGSQHH 58 ++ T L++ L + YL I Y AAW++Q+ G + L+LL+HPPT T+G++ Sbjct: 164 IAGTRLTMRTLTVHYLGQIAYTAAWDIQRQLAAERSRGQIGDTLLLLEHPPTITLGNKAR 223 Query: 59 PEHLLLSAEQLKEKGIALFEIDRGGDITYHGPGQLVGYPLLKLGMDGKVDLHGYLRRLEA 118 P+H+L S +L +G+A+ + DRGG++TYH PGQLV YP+ KL G D+ Y+R LE Sbjct: 224 PDHVLASPAELAARGVAVVQSDRGGEVTYHAPGQLVAYPIFKLSQHGS-DVGRYVRGLEE 282 Query: 119 VIIDFLASYGIEGSRKPEYTGVWV--GDQKICAIGVKFNKSKHRRGFITSHGFAFNVTAG 176 +I LA YG+ G R TGVWV G KICAIGVK + S +T+HG A NV Sbjct: 283 SVIRVLAGYGLVGERVAGLTGVWVRNGAAKICAIGVKLSASG-----VTTHGLALNVDPD 337 Query: 177 IGERGFQGIIPCGIAEYGVTSLEECAGRSFELGEVARELVPCFLKHFPYE 226 + GF I+PCGI + VTSL G++ L EVA L+ + F E Sbjct: 338 LS--GFDLIVPCGITDRSVTSLAFELGQAPALAEVAERLIAQIGEVFALE 385 >gb|EAJ06770.1| unknown [environmental sequence] Length = 215 Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 91/223 (40%), Positives = 129/223 (57%), Gaps = 13/223 (5%) Query: 7 SLLEISYLPLIEYGAAWELQKAAVQAIDAGTGPERLILLQHPPTYTIGSQHHPEHLLLSA 66 ++ I L +EY + W++QK Q + + P+ LI+++H P YT G HLL SA Sbjct: 3 KVVNILDLGKMEYQSTWDIQKEYHQKVLSKKEPDTLIIVEHEPVYTFGKNSDQNHLLQSA 62 Query: 67 EQLKEKGIALFEIDRGGDITYHGPGQLVGYPLLKLGMDGKVDLHGYLRRLEAVIIDFLAS 126 +F I+RGGDITYHGPGQ+V YP+L L K + Y+R LE VII L+ Sbjct: 63 PS----DAKVFHIERGGDITYHGPGQIVVYPILDLNRYKK-SISWYMRTLEKVIIATLSD 117 Query: 127 YGIEGSRKPEYTGVWVGDQKICAIGVKFNKSKHRRGFITSHGFAFNVTAGIGERGFQGII 186 +GI+ + K TGVWV D+KI A GV+ ++ ++T HGFA NV + + F GII Sbjct: 118 FGIDANIKKGLTGVWVADEKIGAQGVRISR------WVTMHGFALNVNTDL--KYFSGII 169 Query: 187 PCGIAEYGVTSLEECAGRSFELGEVARELVPCFLKHFPYEAAA 229 PCGI EYGVTS+E+ G+ L +V ++ F + F + A Sbjct: 170 PCGIFEYGVTSMEKIIGKKQNLEKVKNNVIQNFNRFFNLKMIA 212 >gb|EAB50221.1| unknown [environmental sequence] Length = 215 Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 94/224 (41%), Positives = 127/224 (56%), Gaps = 13/224 (5%) Query: 9 LEISYLPLIEYGAAWELQKAAVQAIDAGTGPERLILLQHPPTYTIGSQHHPEHLLLSAEQ 68 ++I L ++Y +AW QK Q + G P+ LI ++H P YT+G HLL SA Sbjct: 5 IKIIDLGQMDYQSAWRYQKNLHQDVLLGQAPDTLIFVEHEPVYTLGKNADENHLLQSAP- 63 Query: 69 LKEKGIALFEIDRGGDITYHGPGQLVGYPLLKLGMDGKVDLHGYLRRLEAVIIDFLASYG 128 +F I+RGGDIT+HGPGQ+VGYP+L L K + Y+R LE ++ID LA + Sbjct: 64 ---NDARVFNIERGGDITFHGPGQIVGYPILDLHRYKK-SISWYMRILEQILIDTLAIFC 119 Query: 129 IEGSRKPEYTGVWVGDQKICAIGVKFNKSKHRRGFITSHGFAFNVTAGIGERGFQGIIPC 188 IE K TGVWVGD+KI A GV ++ ++T HGFA NV + F GIIPC Sbjct: 120 IEAELKEGLTGVWVGDEKIGAQGVWISR------WVTMHGFALNVNTDLNY--FNGIIPC 171 Query: 189 GIAEYGVTSLEECAGRSFELGEVARELVPCFLKHFPYEAAAAVE 232 GI EYGVTS+E+ G+ +L EV + + F F + V Sbjct: 172 GIFEYGVTSMEKIMGKKQDLSEVKKCITRIFNDAFQMQEKLEVN 215 >gb|EAK46848.1| unknown [environmental sequence] Length = 213 Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/223 (39%), Positives = 127/223 (56%), Gaps = 13/223 (5%) Query: 1 MSSTELSLLEISYLPLIEYGAAWELQKAAVQAIDAGTGPERLILLQHPPTYTIGSQHHPE 60 M T S + I L L Y W LQK Q + +IL++H P YT+G + Sbjct: 1 MIETLESKILIKDLGLRSYQEVWSLQKKMQQQRINERIEDTVILVEHEPVYTLGKNANEN 60 Query: 61 HLLLSAEQLKEKGIALFEIDRGGDITYHGPGQLVGYPLLKLGMDGKVDLHGYLRRLEAVI 120 HLL Q +++ + ++ ++RGGDIT+HGPGQLVGYP++ L D K + Y+R LE + Sbjct: 61 HLL----QSRDRSVDVYNVERGGDITFHGPGQLVGYPIIDLS-DYKKSVDWYMRMLEQLT 115 Query: 121 IDFLASYGIEGSRKPEYTGVWVGDQKICAIGVKFNKSKHRRGFITSHGFAFNVTAGIGER 180 ID L +GI +R TGVW G +KI A GV+ ++ ++T HGFA NV + Sbjct: 116 IDVLLEFGIIATRIQGLTGVWAGQEKIAAQGVRISR------WVTMHGFALNVNPDLSY- 168 Query: 181 GFQGIIPCGIAEYGVTSLEECAGRSFELGEVARELVPCFLKHF 223 + GIIPCGI ++G+TS+EE G+ ++ EV ++ F K F Sbjct: 169 -YDGIIPCGIFDHGITSMEELLGKKQDMKEVKSVVIEKFNKLF 210 >gb|EAK13014.1| unknown [environmental sequence] Length = 216 Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 128/211 (60%), Gaps = 13/211 (6%) Query: 9 LEISYLPLIEYGAAWELQKAAVQAIDAGTGPERLILLQHPPTYTIGSQHHPEHLLLSAEQ 68 + I L I+Y AW+ QK + + G + L LL+H P YT+G + +LL EQ Sbjct: 5 INIVDLGRIDYQTAWDFQKEFHKKVQYGKETDTLFLLEHDPVYTLGKNANKNNLL---EQ 61 Query: 69 LKEKGIALFEIDRGGDITYHGPGQLVGYPLLKLGMDGKVDLHGYLRRLEAVIIDFLASYG 128 + + +F ++RGGDITYHGPGQLVGYP+L L K ++ ++R LE ++I+ L+++G Sbjct: 62 PASE-VKVFNVERGGDITYHGPGQLVGYPILDLNHYQK-NISWFMRTLEEILIETLSTFG 119 Query: 129 IEGSRKPEYTGVWVGDQKICAIGVKFNKSKHRRGFITSHGFAFNVTAGIGERGFQGIIPC 188 I+ +++ TGVWVGD+KI A GV+ ++ ++T HGF+ NV + F I+PC Sbjct: 120 IKANQRDSLTGVWVGDEKIGAQGVRISR------WVTMHGFSLNVNTDLTY--FDSIVPC 171 Query: 189 GIAEYGVTSLEECAGRSFELGEVARELVPCF 219 GI G+TS+++ G S ++ V + +V F Sbjct: 172 GITNCGITSMKKIIGDSQDMDLVKKRIVNAF 202 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.320 0.141 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 381,087,453 Number of extensions: 16416362 Number of successful extensions: 33882 Number of sequences better than 1.0e-05: 479 Number of HSP's gapped: 32894 Number of HSP's successfully gapped: 480 Length of query: 240 Length of database: 757,237,578 Length adjustment: 122 Effective length of query: 118 Effective length of database: 425,995,500 Effective search space: 50267469000 Effective search space used: 50267469000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 124 (52.4 bits)