BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0385.0019.p (221 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAF11369.1| unknown [environmental sequence] 139 5e-32 ref|NP_464022.1| weakly similar to esterase [Listeria monocytoge... 122 5e-27 ref|NP_469838.1| weakly similar to esterase [Listeria innocua] >... 118 1e-25 gb|EAE04477.1| unknown [environmental sequence] 103 3e-21 ref|NP_344362.1| Hypothetical protein [Sulfolobus solfataricus] ... 98 2e-19 >gb|EAF11369.1| unknown [environmental sequence] Length = 182 Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 5/180 (2%) Query: 32 ILGHSYAYIIGGRLGNELAEQKPVFYNRGISGDRISDLYARWNEDAIYLKPDVLSILIGV 91 + G YA++ +L E +E + +NRGISG+++ L RW D + L+PD++SILIGV Sbjct: 2 VFGKGYAWMAASKLLVEKSELELTLHNRGISGNKVHQLAERWKRDCLDLRPDLISILIGV 61 Query: 92 NDLWRIMKGEPSGVTDRFERAYRHVLVETREVLPQTKLVLCEPFILRTGAPAEAW-DEWS 150 ND+W + G G +E + +L TRE LP+ +LV+CEPF+L+ GA E+W E+ Sbjct: 62 NDIWHGLNGRYDGTVQTYEDDFDKLLKRTRESLPKVRLVICEPFVLKCGAVNESWFPEFD 121 Query: 151 KHMAHYQQVVRALAEEFGALHVPLQXXXXXXXXXXXXXYWLWDGVHPTHAGHDLIANEWL 210 K Y+ V + +AEE GA+ VP Q +W DGVHP+ G L+A+ W+ Sbjct: 122 K----YRAVAKRMAEEHGAIFVPFQSMFDEAIRYAEPKHWAGDGVHPSSHGAALMAHYWI 177 >ref|NP_464022.1| weakly similar to esterase [Listeria monocytogenes EGD-e] pir||AG1136 esterase homolog lmo0494 [imported] - Listeria monocytogenes (strain EGD-e) emb|CAC98573.1| lmo0494 [Listeria monocytogenes] Length = 197 Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 107/203 (52%), Gaps = 12/203 (5%) Query: 9 KVFLFQGDSITDGNRGRDEDPNHILGHSYAYIIGGRLGNELAEQKPVFYNRGISGDRISD 68 K LF GDS+TD GRD + + LGH Y +I +L ++ NRG+S +R++D Sbjct: 2 KKLLFLGDSVTDA--GRDFENDRELGHGYVKMIA----EQLEKEDVTVINRGVSANRVAD 55 Query: 69 LYARWNEDAIYLKPDVLSILIGVNDLW-RIMKGEPSGVTDRFERAYRHVLVETREVLPQT 127 L+ R DAI +PDV++I+IG+ND W + E + VT F+ YR +L +E Sbjct: 56 LHRRIEADAISFQPDVVTIMIGINDTWFSFSRWEDTSVT-AFKEVYRVILSRIKEE-TNA 113 Query: 128 KLVLCEPFILRTGAPAEAWDEWSKHMAHYQQVVRALAEEFGALHVPLQXXXXXXXXXXXX 187 +LVL EPF+L E EW + VR LA EFGA +PL Sbjct: 114 ELVLMEPFVL---PYPEDRKEWRGDLDPKIGAVRELAAEFGATLIPLDGLMNALAIKHGP 170 Query: 188 XYWLWDGVHPTHAGHDLIANEWL 210 + DGVHPT AGH+ IA+ WL Sbjct: 171 TFLAEDGVHPTKAGHEAIASTWL 193 >ref|NP_469838.1| weakly similar to esterase [Listeria innocua] pir||AG1494 weakly esterase homolog lin0495 [imported] - Listeria innocua (strain Clip11262) emb|CAC95727.1| lin0495 [Listeria innocua] Length = 197 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 107/203 (52%), Gaps = 12/203 (5%) Query: 9 KVFLFQGDSITDGNRGRDEDPNHILGHSYAYIIGGRLGNELAEQKPVFYNRGISGDRISD 68 K LF GDS+TD G D + + LGH Y +I +L ++ NRG+S +R++D Sbjct: 2 KKLLFLGDSVTDA--GCDFENDRELGHGYVKMIA----EQLEKEDVTVINRGVSANRVAD 55 Query: 69 LYARWNEDAIYLKPDVLSILIGVNDLW-RIMKGEPSGVTDRFERAYRHVLVETREVLPQT 127 L+ R DAI L+PDV++I+IG+ND W + E + VT F+ YR V++ + Sbjct: 56 LHRRIEADAISLQPDVVTIMIGINDTWFSFSRWEDTSVT-AFKEVYR-VILNRIKTETNA 113 Query: 128 KLVLCEPFILRTGAPAEAWDEWSKHMAHYQQVVRALAEEFGALHVPLQXXXXXXXXXXXX 187 +L+L EPF+L E EW + VR LA EFGA +PL Sbjct: 114 ELILMEPFVL---PYPEDRKEWRGDLDPKIGAVRELAAEFGATLIPLDGLMNALAIKHGP 170 Query: 188 XYWLWDGVHPTHAGHDLIANEWL 210 + DGVHPT AGH+ IA+ WL Sbjct: 171 TFLAEDGVHPTKAGHEAIASTWL 193 >gb|EAE04477.1| unknown [environmental sequence] Length = 215 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 100/214 (46%), Gaps = 17/214 (7%) Query: 6 GKSKVFLFQGDSITDGNRGRDEDPNHILGHSYAYIIGGRLGNELAEQKPVFYNRGISGDR 65 G + LF GDSITD R R + LG+ Y I+ L + E N GI G+R Sbjct: 4 GTKQTLLFIGDSITDCGRSRPIGERNGLGNGYVAIVDSLLASFYPEASIHVVNTGIGGNR 63 Query: 66 ISDLYARWNEDAIYLKPDVLSILIGVNDLWR-------IMKGEPSGVTDRFERAYRHVLV 118 I+DL RW DAI + PD LSI+IG+ND+ R + + +P +RFE YR +L Sbjct: 64 ITDLAHRWQTDAIDIAPDWLSIMIGINDVARQFDSISLLEQIDP----ERFESTYRELLG 119 Query: 119 ETREVLPQTKLVLCEPFILRTGAPAEAWDEWSKHMAHYQQVVRALAEEFGALHVPLQXXX 178 + R+ L L L PF L T D M Y ++V+ +A ++ A+ V Q Sbjct: 120 QIRDQLK--GLTLMTPFYLETNTE----DPMRNLMDVYGKIVKRIANDYDAMFVDTQYFF 173 Query: 179 XXXXXXXXXXYWLWDGVHPTHAGHDLIANEWLSA 212 D VHP GH ++A +L + Sbjct: 174 NQHLKHRPTQSMCGDRVHPNQTGHMILAKAFLQS 207 >ref|NP_344362.1| Hypothetical protein [Sulfolobus solfataricus] pir||A99487 hypothetical protein SSO3052 [imported] - Sulfolobus solfataricus gb|AAK43152.1| Hypothetical protein [Sulfolobus solfataricus] Length = 210 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 5/204 (2%) Query: 10 VFLFQGDSITDGNRGRDEDPNHILGHSYAYIIGGRLGNELAEQKPVFYNRGISGDRISDL 69 V +F GDSITD R++ N LG+ Y + + + E K N GISG+ + DL Sbjct: 8 VIVFAGDSITD----REKSNNAPLGYGYVNLFYNLMLAKHPETKITVINSGISGNTVIDL 63 Query: 70 YARWNEDAIYLKPDVLSILIGVNDLWRIMKGEPSGVTDRFERAYRHVLVETREVLPQTKL 129 RW++D + KP+ +SILIG+NDL + + G + + + R +L TR+VL Sbjct: 64 IDRWDDDVLSYKPNWISILIGINDLHKFLGGLTTFNPENYYENLRRLLKYTRKVLNNVNF 123 Query: 130 VLCEPF-ILRTGAPAEAWDEWSKHMAHYQQVVRALAEEFGALHVPLQXXXXXXXXXXXXX 188 +L PF I R + + + Y + VR L+ EF A ++ L Sbjct: 124 ILMTPFYISRNKLEGGFRAKVLELLPQYIEKVRLLSNEFSATYIDLHDTFKKLVNIREPN 183 Query: 189 YWLWDGVHPTHAGHDLIANEWLSA 212 + + VHP GH +IA + L A Sbjct: 184 VYAPEPVHPNFTGHMVIALKLLEA 207 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.320 0.139 0.443 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 344,321,005 Number of extensions: 13736689 Number of successful extensions: 29743 Number of sequences better than 1.0e-05: 14 Number of HSP's gapped: 29732 Number of HSP's successfully gapped: 14 Length of query: 221 Length of database: 757,237,578 Length adjustment: 121 Effective length of query: 100 Effective length of database: 428,710,599 Effective search space: 42871059900 Effective search space used: 42871059900 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 123 (52.0 bits)