BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0377.0024.p (767 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_813625.1| periplasmic beta-glucosidase precursor, xylosid... 682 0.0 gb|AAF43783.1| xylosidase/arabinosidase [Thermoanaerobacter etha... 557 e-157 ref|NP_466303.1| similar to beta-glucosidase [Listeria monocytog... 547 e-154 emb|CAA91219.1| beta-xylo-glucosidase [Thermoanaerobacter brockii] 540 e-152 ref|NP_344344.1| Beta-xylosidase [Sulfolobus solfataricus] >gi|2... 532 e-149 >ref|NP_813625.1| periplasmic beta-glucosidase precursor, xylosidase/arabinosidase [Bacteroides thetaiotaomicron VPI-5482] gb|AAO79819.1| periplasmic beta-glucosidase precursor, xylosidase/arabinosidase [Bacteroides thetaiotaomicron VPI-5482] Length = 769 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/753 (45%), Positives = 480/753 (63%), Gaps = 9/753 (1%) Query: 3 YKDKTCSVEDRVRDLLPRMTLAEKAGQLVQPFGWQCYEKRPDGTAGMTEAFKRRIASGGV 62 YK+ SV++RV+DLL RMTL +K GQL+ P GW+ YE + D +E FKR + Sbjct: 14 YKNPVLSVDERVKDLLSRMTLEDKVGQLLCPLGWEMYEIK-DDEVHPSEKFKRLMKEKNA 72 Query: 63 GSLYGTLRADPWTGVTLDTGLSPKEGAETVNAIQAYAMKESRLGIPILFGEECSHGHMAI 122 G L+ T RADPWT TL+ GL+P+ A+ NA+Q Y ++ +RLGIP+ EE HGHMAI Sbjct: 73 GMLWATYRADPWTKKTLENGLNPELAAKAGNALQKYVIENTRLGIPLFLAEEAPHGHMAI 132 Query: 123 GATVFPVPLALGSMWNPELYREMCRAVALETRSQGGAATYSPVLDVVRDPRWGRTEETFG 182 G TVFP + + + W+P L E+ +A E RSQG +Y PVLD+ RDPRW R EETFG Sbjct: 133 GTTVFPTGIGMAATWSPTLIEEVGNVIAKEIRSQGAHISYGPVLDLSRDPRWSRVEETFG 192 Query: 183 EDPFLIAAMGVEAVKGLQGERLDGEDSVMATLKHFAAYGSSEGGRNSAPVHMGLRELHEV 242 EDP L +G + GL L E + +ATLKHF AY EGG+N +G R+LHE Sbjct: 193 EDPVLSGRLGAAMILGLGSGDLSCEYATIATLKHFLAYAVPEGGQNGNYASVGTRDLHEN 252 Query: 243 DLLPFRKAVEAGALSIMTAYNEIDGVPCTTNRYLLQDVLREQWGFEGFVITDCGALGMLT 302 L PFR+A++AGALS+MT+YN IDGVPCT N YLL +LR +W F GFV++D ++ + Sbjct: 253 FLPPFREAIDAGALSVMTSYNSIDGVPCTANHYLLTQLLRNEWRFRGFVVSDLYSIEGVH 312 Query: 303 SGHNTADSGEAAVAQALLAGIDMEMSGEMFEKHLSAAISHGRLKASDLDRAAARILELKF 362 H A + E A QA+ AG D+++ G+ F +L+ A+ G++ + +D A R+L +KF Sbjct: 313 ESHFVAPTIEEAAMQAVSAGADIDLGGDAF-MNLTHAVQFGKISEAVIDTAVCRVLRMKF 371 Query: 363 KLGLFDRPYADPERAGQVIGRPEHRALARRIAGESIVMLKNEADTLPLSKNIRRVAVIGP 422 ++GLF+ PY +P+ A +++ +H LAR++A SIV+LKNE LPL+K I++VAV+GP Sbjct: 372 EIGLFEHPYVNPKTATKIVRSKDHIKLARKVAQSSIVLLKNENSILPLNKKIKKVAVVGP 431 Query: 423 NADAPYNLLGDYTSPQPKGAVVTVLDGIRSALGGNPDRVLYAPGCRIKGDSREGFPHXXX 482 NAD YN+LGDYT+PQ + TVLDG+ S L +P +V Y GC I+ + Sbjct: 432 NADNRYNMLGDYTAPQEDENIKTVLDGVISKL--SPSKVEYVRGCAIRDTTVNEIAEAVE 489 Query: 483 XXXXXXXXXXXIGGSSARDFGEGTIDLLTGASVVTEHSWSDMECGEGIDRSTLNLMGVQL 542 +GGSSARDF + TGA++ E S SDMECGEG DR+TL L+G Q Sbjct: 490 AASRSEVIIAVVGGSSARDFKTSYQE--TGAAIADEKSISDMECGEGFDRATLTLLGKQQ 547 Query: 543 ELVQEIRKLGKPLIVVYINGRPIAEPWIAEHADAILEAWYPGQEGGHAIADILFGEVNPS 602 +L+ ++ GKPLIVVYI GRP+ + W +E+ADA+L A YPGQEGG+AIAD+LFG+ NP+ Sbjct: 548 DLLIALKATGKPLIVVYIEGRPLDKVWASEYADALLTASYPGQEGGYAIADVLFGDYNPA 607 Query: 603 GRLTISIPKHVGQLPVXXXXXXXXXXXXLESDFNAEYPFGYGLSFSEFRYSNLRVQPAVI 662 GRL +SIP+ VGQ+PV +E + Y FGYGLS++ F YS+L+V + Sbjct: 608 GRLPVSIPRSVGQIPVYYNKKAPRNHDYVEQAASPLYTFGYGLSYTTFEYSDLQV---IR 664 Query: 663 PADGEALVSVEVTNTGTRAGSEVVQLYISDLASMITRPEKQLKGFRKIRLEPGNTQTVTF 722 + VS +V NTG+ G EV QLY+ D + + +P +QLK F + L+ G + + F Sbjct: 665 KSPCHFEVSFKVKNTGSYDGEEVAQLYLRDEYASVVQPLRQLKCFERFFLKRGEEKEIFF 724 Query: 723 SVGREQLEYVSADLTRIVEEGEFTLMVGPHSEE 755 ++ + L + ++ R+VE G+F +M+G S++ Sbjct: 725 TLTEKDLSIIDRNMKRVVETGDFRIMIGASSDD 757 >gb|AAF43783.1| xylosidase/arabinosidase [Thermoanaerobacter ethanolicus] Length = 784 Score = 557 bits (1436), Expect = e-157, Method: Compositional matrix adjust. Identities = 318/789 (40%), Positives = 446/789 (56%), Gaps = 72/789 (9%) Query: 2 IYKDKTCSVEDRVRDLLPRMTLAEKAGQLVQPFGWQCYEKRPDGTAGMTEAFKRRIASGG 61 +Y D T SVE RV DLL +MT+ EK QL + YE D +A +R+ S G Sbjct: 4 LYLDSTQSVEKRVEDLLQQMTIEEKVAQLNSIW---VYEILDDMKFSFDKA--KRLMSYG 58 Query: 62 VGSLYGTLRADPWTGVTLDTGLSPKEGAETVNAIQAYAMKESRLGIPILFGEECSHGHMA 121 + + T + + LSP+E N IQ + ++ +RLGIP L EE G+M Sbjct: 59 ISQI---------TRLGGASNLSPRETVRIANQIQKFLIENTRLGIPALIHEESCSGYMP 109 Query: 122 IGATVFPVPLALGSMWNPELYREMCRAVALETRSQGGAATYSPVLDVVRDPRWGRTEETF 181 GAT+FP + + S WN E+ +M + + ++ G +P+LD+ RDPRWGRTEETF Sbjct: 110 KGATIFPQTIGVASTWNNEIVEKMASVIREQMKAVGARQALAPLLDITRDPRWGRTEETF 169 Query: 182 GEDPFLIAAMGVEAVKGLQGERLDGEDSVMATLKHFAAYGSSEGGRNSAPVHMGLRELHE 241 GEDP+L+ MGV ++GLQ E L + ++AT KHF YG+SEGG N AP H+ REL E Sbjct: 170 GEDPYLVMRMGVSYIRGLQTESL--REGIVATGKHFVGYGNSEGGMNWAPAHIPERELRE 227 Query: 242 VDLLPFRKAVEAGALS-IMTAYNEIDGVPCTTNRYLLQDVLREQWGFEGFVITDCGALGM 300 V L PF AV+ LS IM Y+E+DGVPC ++ LL D+LR+ WGFEG V++D A+ Sbjct: 228 VFLYPFEAAVKEPKLSSIMPGYHELDGVPCHKSKKLLNDILRKDWGFEGIVVSDYFAISQ 287 Query: 301 LTSGHNTADSGEAAVAQALLAGIDMEM-SGEMFEKHLSAAISHGRLKASDLDRAAARILE 359 L H+ + A AL AG+D+E+ S + + L I G + ++ A R+L+ Sbjct: 288 LYEYHHVTSDKKGAAKLALEAGVDVELPSTDYYGLPLRELIESGEIDIDFVNEAVKRVLK 347 Query: 360 LKFKLGLFDRPYADPERAGQVIGRPEHRALARRIAGESIVMLKNEADTLPLSKNIRRVAV 419 +KF+LGLF+ PY + E+A ++ E R LA +IA ESIV+LKNE + LPL K+++ +AV Sbjct: 348 IKFELGLFENPYINEEKAVEIFDTNEQRELAYKIAQESIVLLKNENNLLPLKKDLKSIAV 407 Query: 420 IGPNADAPYNLLGDY-------------------TSPQPKG--------AVVTVLDGIRS 452 IGPNAD+ N++GDY +P P+ +VTVL GI++ Sbjct: 408 IGPNADSIRNMIGDYAYPCHIESLLEMRETDNVFNTPLPESLEAKDIYVPIVTVLQGIKA 467 Query: 453 ALGGNPDRVLYAPGCRIKGDSREGFPHXXXXXXXXXXXXXXIGGSSARDFGEGTIDLLTG 512 N + VLYA GC + +S++GF +G S G D T Sbjct: 468 KASSNTE-VLYAKGCDVLNNSKDGFKEAVEIAKQADVAVVVVGDKS------GLTDGCT- 519 Query: 513 ASVVTEHSWSDMECGEGIDRSTLNLMGVQLELVQEIRKLGKPLIVVYINGRPIAEPWIAE 572 GE DR+ LNL GVQ EL++ + + G P+IVV INGRP++ WIAE Sbjct: 520 -------------SGESRDRADLNLPGVQEELIKAVYETGTPVIVVLINGRPMSISWIAE 566 Query: 573 HADAILEAWYPGQEGGHAIADILFGEVNPSGRLTISIPKHVGQLPVXXXXXXXXXXXXLE 632 AI+EAW PG+EGG A+AD++FG+ NP G+L ISIP+ VGQLPV + Sbjct: 567 KIPAIIEAWLPGEEGGRAVADVIFGDYNPGGKLPISIPQSVGQLPVYYYHKPSGGRSHWK 626 Query: 633 SDF-----NAEYPFGYGLSFSEFRYSNLRVQPAVIPA-DGEALVSVEVTNTGTRAGSEVV 686 D+ YPFGYGLS++EF Y+NL + + D +SV++ NTGT G EVV Sbjct: 627 GDYVELSTKPLYPFGYGLSYTEFSYTNLNISNRKVSLRDRMVEISVDIKNTGTLKGDEVV 686 Query: 687 QLYISDLASMITRPEKQLKGFRKIRLEPGNTQTVTFSVGREQLEYVSADLTRIVEEGEFT 746 QLYI A +TRP K+LKGF++I L+ G +TV F + EQL + ++ +VE G Sbjct: 687 QLYIHQEALSVTRPVKELKGFKRITLDAGEEKTVIFKLSIEQLGFYDENMEYVVEPGRVD 746 Query: 747 LMVGPHSEE 755 +M+G SE+ Sbjct: 747 VMIGSSSED 755 >ref|NP_466303.1| similar to beta-glucosidase [Listeria monocytogenes EGD-e] pir||AD1422 beta-glucosidase homolog lmo2781 [imported] - Listeria monocytogenes (strain EGD-e) emb|CAD00994.1| lmo2781 [Listeria monocytogenes] Length = 756 Score = 547 bits (1409), Expect = e-154, Method: Compositional matrix adjust. Identities = 317/776 (40%), Positives = 451/776 (58%), Gaps = 39/776 (5%) Query: 2 IYKDKTCSVEDRVRDLLPRMTLAEKAGQLVQP-FGWQCYEKRPDG-TAGMTEAFKRRIAS 59 +Y DK V +RV DLL +MTLAEK GQL Q +GW+ + + DG T +TE FK + Sbjct: 3 VYLDKEKPVSERVEDLLSKMTLAEKCGQLNQRMYGWEAFSR--DGETFQITEKFKEEVTR 60 Query: 60 -GGVGSLYGTLRADPWTGVTLDTGLSPKEGAETVNAIQAYAMKESRLGIPILFGEECSHG 118 G+G+LYG RADPW+ + DTG+S K + N IQ Y ++ +RLGIP+L EE HG Sbjct: 61 FEGIGALYGLFRADPWSKMNKDTGVSRKNAGKVANKIQRYVIENTRLGIPVLLAEEVPHG 120 Query: 119 HMAIGATVFPVPLALGSMWNPELYREMCRAVALETRSQGGAATYSPVLDVVRDPRWGRTE 178 H A+ + +PV LA + +NPEL +++ A+ E +G + LDV+RDPRWGR E Sbjct: 121 HQALDSESYPVNLARAASFNPELQKQVASAITEEISEKGVHLALASALDVLRDPRWGRAE 180 Query: 179 ETFGEDPFLIAAMGVEAVKGLQGERLDGEDSVMATLKHFAAYGSSEGGRNSAPVHMGLRE 238 E +GEDP+L A + +G Q + LKHFAA G GG NS PV +G+RE Sbjct: 181 ECYGEDPYLAAELTAAITEGFQ-----ASGKIAVILKHFAAQGEPIGGHNSGPVSIGVRE 235 Query: 239 LHEVDLLPFRKAVEAGALSIMTAYNEIDGVPCTTNRYLLQDVLREQWGFEGFVITDCGAL 298 L E+ L P R + +GAL +M AYNEIDGVPC N+ LL +LRE+ GF G V+ D AL Sbjct: 236 LREIFLDPMRAGIRSGALGVMAAYNEIDGVPCHANKELLTTILREEMGFSGIVMADGCAL 295 Query: 299 GMLTSGHNTADSGEAAVAQALLAGIDMEMSGEMFEKHLSAAISHGRLKASDLDRAAARIL 358 L + D +AA AL AG+D+ + E+F L ++ G L +D A +R+L Sbjct: 296 DRLLKLN--PDPKKAA-KMALEAGVDLSLWDEVF-PFLEESVEKGILDEKIVDDAVSRVL 351 Query: 359 ELKFKLGLFDRPYADPERAGQVIGRPEH--RALARRIAGESIVMLKNEADTLPLSKNIRR 416 ++KF+LGLF++P+ + + I P+ R L + A E I +LKN+ +TLPL ++ Sbjct: 352 QVKFQLGLFEQPFVEED-----IQEPKSDWRQLNLQAAREGICLLKNDFETLPLVGEPKK 406 Query: 417 VAVIGPNADAPYNLLGDYTSPQPKGAVVTVLDGIRSALGGNPDRVLYAPGCRIKGDSREG 476 +AV+GP+ D+ YN LGDYT+PQ + VTVL+GI++ L N + VL G I+ + +G Sbjct: 407 IAVVGPSIDSLYNQLGDYTAPQNESECVTVLEGIKNQLPENWE-VLSEKGAEIREELPDG 465 Query: 477 FPHXXXXXXXXXXXXXXIGGSSARDFGEGTIDLLTGASVVTEHSWSDMECGEGIDRSTLN 536 +GGSSAR+F ++ L +V ++ +M+ GE +D + + Sbjct: 466 IQRAEVVAKEADAIVMVLGGSSARNF---DMEFLNNGAVSSKG--PNMDAGENVDVADIT 520 Query: 537 LMGVQLELVQEIRKLGKPLIVVYINGRPIAEPWIAEHADAILEAWYPGQEGGHAIADILF 596 L QL+L +++ GKP+IVV I GRPIA P I+ ADAIL AWYPG GG AIA++LF Sbjct: 521 LPQPQLDLFYAMKRTGKPVIVVMIQGRPIAIPEISLAADAILTAWYPGSLGGTAIAEVLF 580 Query: 597 GEVNPSGRLTISIPKHVGQLPVXXXXXXXXXXXXLESDFNAE----YPFGYGLSFSEFRY 652 G NPSG+L +SIP+ GQ+P+ E F+ YPFGYGLS+S F Y Sbjct: 581 GHYNPSGKLPVSIPRSSGQIPIYYNQKAVEYK---EDYFDLTGKPLYPFGYGLSYSTFEY 637 Query: 653 SNLRVQPAVIPAD----GEAL-VSVEVTNTGTRAGSEVVQLYISDLASMITRPEKQLKGF 707 +L+++ I G+++ V V + N AG EVVQLYI D+ + ITR +K+LK F Sbjct: 638 QDLQIKQESIKISELLGGQSVEVKVTLKNISNVAGEEVVQLYIHDMEASITRRKKELKAF 697 Query: 708 RKIRLEPGNTQTVTFSVGREQLEYVSADLTRIVEEGEFTLMVGPHSEEYLTAPLHV 763 +K+R+ T TVTF + + E S + VE G + VG S+ LT + + Sbjct: 698 KKVRIAANQTTTVTFKLDKSSFEIWSINNKYEVEPGGIEIFVGGSSDTKLTGRVSI 753 >emb|CAA91219.1| beta-xylo-glucosidase [Thermoanaerobacter brockii] Length = 730 Score = 540 bits (1390), Expect = e-152, Method: Compositional matrix adjust. Identities = 295/710 (41%), Positives = 414/710 (58%), Gaps = 58/710 (8%) Query: 81 TGLSPKEGAETVNAIQAYAMKESRLGIPILFGEECSHGHMAIGATVFPVPLALGSMWNPE 140 + LSP+E N IQ + ++ +RLGIP L EE G+MA GAT+FP + + S WN E Sbjct: 15 SNLSPRETVRIANQIQKFLIENTRLGIPALIHEESCSGYMAKGATIFPQTIGVASTWNNE 74 Query: 141 LYREMCRAVALETRSQGGAATYSPVLDVVRDPRWGRTEETFGEDPFLIAAMGVEAVKGLQ 200 + +M + + ++ G +P+LD+ RDPRWGRTEETFGEDP+L+ MGV ++GLQ Sbjct: 75 IVEKMASVIREQMKAVGARQALAPLLDITRDPRWGRTEETFGEDPYLVMRMGVSYIRGLQ 134 Query: 201 GERLDGEDSVMATLKHFAAYGSSEGGRNSAPVHMGLRELHEVDLLPFRKAVEAGALS-IM 259 E L ++ ++AT KHF YG+SEGG N AP H+ REL EV L PF AV+ LS IM Sbjct: 135 TESL--KEGIVATGKHFVGYGNSEGGMNWAPAHIPERELREVFLYPFEAAVKEAKLSSIM 192 Query: 260 TAYNEIDGVPCTTNRYLLQDVLREQWGFEGFVITDCGALGMLTSGHNTADSGEAAVAQAL 319 Y+E+DGVPC ++ LL D+LR+ WGFEG V++D A+ L H+ + A AL Sbjct: 193 PGYHELDGVPCHKSKKLLNDILRKDWGFEGIVVSDYFAISQLYEYHHVTSDKKGAAKLAL 252 Query: 320 LAGIDMEM-SGEMFEKHLSAAISHGRLKASDLDRAAARILELKFKLGLFDRPYADPERAG 378 AG+D+E+ S + + L I G + ++ A R+L++KF+LGLF+ PY + E+A Sbjct: 253 EAGVDVELPSTDYYGLPLRELIESGEIDIDFVNEAVKRVLKIKFELGLFENPYINEEKAV 312 Query: 379 QVIGRPEHRALARRIAGESIVMLKNEADTLPLSKNIRRVAVIGPNADAPYNLLGDY---- 434 ++ E R LA +IA ESIV+LKNE + LPL K+++ +AVIGPNAD+ N++GDY Sbjct: 313 EIFDTNEQRELAYKIAQESIVLLKNENNLLPLKKDLKSIAVIGPNADSIRNMIGDYAYPC 372 Query: 435 ---------------TSPQPKG--------AVVTVLDGIRSALGGNPDRVLYAPGCRIKG 471 +P P+ +VTVL GI++ + N + VLYA GC + Sbjct: 373 HIESLLEMRETDNVFNTPLPESLEAKDIYVPIVTVLQGIKAKVSSNTE-VLYAKGCDVLN 431 Query: 472 DSREGFPHXXXXXXXXXXXXXXIGGSSARDFGEGTIDLLTGASVVTEHSWSDMECGEGID 531 +S++GF +G S G D T GE D Sbjct: 432 NSKDGFKEAVEIAKQADVAVVVVGDKS------GLTDGCT--------------SGESRD 471 Query: 532 RSTLNLMGVQLELVQEIRKLGKPLIVVYINGRPIAEPWIAEHADAILEAWYPGQEGGHAI 591 R+ LNL GVQ EL++ I + G P+IVV INGRP++ WIAE AI+EAW PG+EGG A+ Sbjct: 472 RADLNLPGVQEELIKAIYETGTPVIVVLINGRPMSISWIAEKIPAIIEAWLPGEEGGRAV 531 Query: 592 ADILFGEVNPSGRLTISIPKHVGQLPVXXXXXXXXXXXXLESDF-----NAEYPFGYGLS 646 AD++FG+ NP G+L ISIP+ VGQLPV + D+ YPFGYGLS Sbjct: 532 ADVIFGDYNPGGKLPISIPQSVGQLPVYYYHKPSGGRSHWKGDYVELSTKPLYPFGYGLS 591 Query: 647 FSEFRYSNLRVQPAVIPA-DGEALVSVEVTNTGTRAGSEVVQLYISDLASMITRPEKQLK 705 ++EF Y+NL + + D +SV++ NTGT G EVVQLYI A +TRP K+LK Sbjct: 592 YTEFSYTNLNISNRKVSLRDRMVEISVDIKNTGTLKGDEVVQLYIHQEALSVTRPVKELK 651 Query: 706 GFRKIRLEPGNTQTVTFSVGREQLEYVSADLTRIVEEGEFTLMVGPHSEE 755 GF++I L+ G +TV F + EQL + ++ +VE G +M+G SE+ Sbjct: 652 GFKRITLDAGEEKTVIFKLSIEQLGFYDENMEYVVEPGRVDVMIGSSSED 701 >ref|NP_344344.1| Beta-xylosidase [Sulfolobus solfataricus] pir||G90484 beta-xylosidase [imported] - Sulfolobus solfataricus gb|AAK43134.1| Beta-xylosidase [Sulfolobus solfataricus] Length = 754 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 290/685 (42%), Positives = 406/685 (59%), Gaps = 24/685 (3%) Query: 82 GLSPKEGAETVNAIQAYAMKESRLGIPILFGEECSHGHMAIGATVFPVPLALGSMWNPEL 141 GL PKE + VN +Q + ++ +RL IP + EEC G M +T FP + L S WNPEL Sbjct: 59 GLKPKEVVKLVNKVQKFLVENTRLKIPAIIHEECLSGLMGYSSTAFPQAIGLASTWNPEL 118 Query: 142 YREMCRAVALETRSQGGAATYSPVLDVVRDPRWGRTEETFGEDPFLIAAMGVEAVKGLQG 201 + + + R G SPVLDV RDPRWGR EET+GEDP+L+A+MG+ + GLQ Sbjct: 119 LTNVASTIRSQGRLIGVNQCLSPVLDVCRDPRWGRCEETYGEDPYLVASMGLAYITGLQ- 177 Query: 202 ERLDGEDSVMATLKHFAAYGSSEGGRNSAPVHMGLRELHEVDLLPFRKAVEAG-ALSIMT 260 GE ++AT KHFAA+G EGGRN A VH+G REL E L PF AV+ G +SIM Sbjct: 178 ----GETQLVATAKHFAAHGFPEGGRNIAQVHVGNRELRETFLFPFEVAVKIGKVMSIMP 233 Query: 261 AYNEIDGVPCTTNRYLLQDVLREQWGFEGFVITDCGALGMLTSGHNTADSGEAAVAQALL 320 AY+EIDGVPC N LL ++LR++WGF+G V++D + L + H A + A AL Sbjct: 234 AYHEIDGVPCHGNPQLLTNILRQEWGFDGIVVSDYDGIRQLEAIHKVASNKMEAAILALE 293 Query: 321 AGIDMEM-SGEMFEKHLSAAISHGRLKASDLDRAAARILELKFKLGLFDRPYADPERAGQ 379 +G+D+E + + + + L AI G + + +DRA R+L +K +LGL D P+ D + Sbjct: 294 SGVDIEFPTIDCYGEPLVTAIKEGLVSEAIIDRAVERVLRIKERLGLLDNPFVDESAVPE 353 Query: 380 VIGRPEHRALARRIAGESIVMLKNEADTLPLSKNIRRVAVIGPNADAPYNLLGDYT---- 435 + + R LA + A ESIV+LKNE + LPLSKNI ++AVIGPNA+ P N+LGDYT Sbjct: 354 RLDDRKSRELALKAARESIVLLKNENNMLPLSKNINKIAVIGPNANDPRNMLGDYTYTGH 413 Query: 436 -SPQPKGAVVTVLDGIRSALGGNPDRVLYAPGCRIKGDSREGFPHXXXXXXXXXXXXXXI 494 + +VTVL GI +G +VLYA GC I G+S+EGF + Sbjct: 414 LNIDSGIEIVTVLQGIAKKVGEG--KVLYAKGCDIAGESKEGFSEAIEIAKQADVIIAVM 471 Query: 495 GGSSARDFGEGTIDLLTGASVVTEHSWSDMEC--GEGIDRSTLNLMGVQLELVQEIRKLG 552 G S L+ + +E + + GEG DR++L L+GVQ EL++E+ K G Sbjct: 472 GEKSGLP--------LSWTDIPSEEEFKKYQAVTGEGNDRASLRLLGVQEELLKELYKTG 523 Query: 553 KPLIVVYINGRPIAEPWIAEHADAILEAWYPGQEGGHAIADILFGEVNPSGRLTISIPKH 612 KP+I+V INGRP+ I + AI+EAW+PG+EGG+AIADI+FG+ NPSGRL I+ P Sbjct: 524 KPIILVLINGRPLVLSPIINYVKAIIEAWFPGEEGGNAIADIIFGDYNPSGRLPITFPMD 583 Query: 613 VGQLPVXXXXXXXXXXXXLESDFNAEYPFGYGLSFSEFRYSNLRVQPAVIPADGEALVSV 672 GQ+P+ + + + FGYGLS+++F YSNL V P + + + Sbjct: 584 TGQIPLYYSRKPSSFRPYVMLHSSPLFTFGYGLSYTQFEYSNLEVTPKEVGPLSYITILL 643 Query: 673 EVTNTGTRAGSEVVQLYISDLASMITRPEKQLKGFRKIRLEPGNTQTVTFSVGREQLEYV 732 +V N G G EVVQLYIS S + RP K+LKGF K+ L+PG + V F++ E L + Sbjct: 644 DVKNVGNMEGDEVVQLYISKSFSSVARPVKELKGFAKVHLKPGEKRRVKFALPMEALAFY 703 Query: 733 SADLTRIVEEGEFTLMVGPHSEEYL 757 + +VE+GE+ +++G SE + Sbjct: 704 DNFMRLVVEKGEYQILIGNSSENII 728 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.136 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,108,436,669 Number of extensions: 46506645 Number of successful extensions: 115315 Number of sequences better than 1.0e-05: 704 Number of HSP's gapped: 113023 Number of HSP's successfully gapped: 985 Length of query: 767 Length of database: 757,237,578 Length adjustment: 134 Effective length of query: 633 Effective length of database: 393,414,312 Effective search space: 249031259496 Effective search space used: 249031259496 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)