BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0370.0026.p (565 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_388476.1| similar to ABC transporter (ATP-binding protein... 649 0.0 ref|NP_241416.1| ABC transporter (ATP-binding protein) [Bacillus... 633 e-180 ref|ZP_00182836.1| hypothetical protein Exigu182001 [Exiguobacte... 624 e-177 ref|NP_976612.1| ABC transporter, ATP-binding protein [Bacillus ... 621 e-176 ref|NP_830141.1| ABC transporter ATP-binding protein uup [Bacill... 621 e-176 >ref|NP_388476.1| similar to ABC transporter (ATP-binding protein) [Bacillus subtilis] sp|O05519|YDIF_BACSU Hypothetical ABC transporter ATP-binding protein ydiF pir||G69786 ABC transporter (ATP-binding protein) homolog ydiF - Bacillus subtilis dbj|BAA19719.1| H. influenzae hypothetical ABC transporter; P44808 (974) [Bacillus subtilis] emb|CAB12414.1| ydiF [Bacillus subtilis subsp. subtilis str. 168] Length = 642 Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/539 (58%), Positives = 408/539 (75%), Gaps = 5/539 (0%) Query: 1 MLLQATGITKSYGIQSVLDGISLQVNEKERVGLVGVNGAGKSTFLQILAGEMSFDSGQIH 60 M+LQA ++KS+G ++L+ I L+V ++R+ +VG NGAGKST L+I+AG++S++ G+I Sbjct: 2 MILQANQLSKSFGADTILNNIKLEVRNRDRIAIVGRNGAGKSTLLKIIAGQLSYEKGEII 61 Query: 61 KSKETTIGYLAQNSGLQSDKTIQEEMLAVFSPLIEAEAELRQLEADIADPGLADDPKRYE 120 K K+ T+GYLAQ++GL S TI+EE+L VF L E E+R +E +A A DP E Sbjct: 62 KPKDITMGYLAQHTGLDSKLTIKEELLTVFDHLKAMEKEMRAMEEKMA----AADPGELE 117 Query: 121 DLLERYARRSDWFKDHGGYEMNTRIRSVLHGMGFGEFPPETPIATLSGGQKTRLALARIL 180 +++ Y R FKD GGY+ +RSVLHG+GF F T + +LSGGQKTRLAL ++L Sbjct: 118 SIMKTYDRLQQEFKDKGGYQYEADVRSVLHGLGFSHFDDSTQVQSLSGGQKTRLALGKLL 177 Query: 181 LQAPDLLMLDEPTNHLDIETLTWLEDYLRSYAGGILVVSHDRYFLDRLVTTIVEIERHQS 240 L PDLL+LDEPTNHLDI+TLTWLE YL+ Y+G IL+VSHDRYFLD++V + E+ R +S Sbjct: 178 LTQPDLLILDEPTNHLDIDTLTWLEHYLQGYSGAILIVSHDRYFLDKVVNQVYEVSRAES 237 Query: 241 RKYTGNYSRYVDQKAAEYEIRLKQYEKQQEEISRMEDFVQRNIVRASTTKRAQSRRKALD 300 +KY GNYS Y+DQKAA+YE LK YEKQQ+EI++++DFV RN+ RASTTKRAQSRRK L+ Sbjct: 238 KKYHGNYSAYLDQKAAQYEKDLKMYEKQQDEIAKLQDFVDRNLARASTTKRAQSRRKQLE 297 Query: 301 KMERIDKPLGDLKKASFSFEPDFMSGKEVLQVRDVAVAFSEKAEPLFRNASFELRRGETA 360 +M+ + KPLGD K A+F F+ SG EVL+V+D+ +++ E PL SF L RGE+A Sbjct: 298 RMDVMSKPLGDEKSANFHFDITKQSGNEVLRVQDLTISY-ENQPPLLTEVSFMLTRGESA 356 Query: 361 ALIGPNGIGKSTLLQCLTGTREPSTGTVNWGTKVKIAYYDQEQTRLNPRNTVLEELWSEY 420 AL+GPNGIGKSTLL+ L T +P GT+++G+ V + YYDQEQ L VL+ELW EY Sbjct: 357 ALVGPNGIGKSTLLKTLIDTLKPDQGTISYGSNVSVGYYDQEQAELTSSKRVLDELWDEY 416 Query: 421 PMLEEARIRTILGNFLFSGEDVLKKVAALSGGEKARVSLSKLMLRGANMLILDEPTNHLD 480 P L E IRT LGNFLFSG+DVLK V +LSGGEKAR++L+KLML+ AN LILDEPTNHLD Sbjct: 417 PGLPEKEIRTCLGNFLFSGDDVLKPVHSLSGGEKARLALAKLMLQKANFLILDEPTNHLD 476 Query: 481 LMSREVLESALIDFEGTLLFISHDRYFLNKMAERVLELHPGGIDQYLGNYDDYIEKKRE 539 L S+EVLE+ALID+ GTLLF+SHDRYF+N++A RVLEL I++YLG+YD Y EKK E Sbjct: 477 LDSKEVLENALIDYPGTLLFVSHDRYFINRIATRVLELSSSHIEEYLGDYDYYTEKKTE 535 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 55/349 (15%) Query: 2 LLQATGITKSYGIQS-VLDGISLQVNEKERVGLVGVNGAGKSTFLQILAGEMSFDSGQIH 60 +L+ +T SY Q +L +S + E LVG NG GKST L+ L + D G I Sbjct: 326 VLRVQDLTISYENQPPLLTEVSFMLTRGESAALVGPNGIGKSTLLKTLIDTLKPDQGTIS 385 Query: 61 KSKETTIGYLAQNSG-LQSDKTIQEEMLAVFSPLIEAEAELRQLEADIADPGLADDPKRY 119 ++GY Q L S K + +E+ + PGL P++ Sbjct: 386 YGSNVSVGYYDQEQAELTSSKRVLDELWDEY-------------------PGL---PEK- 422 Query: 120 EDLLERYARRSDWFKDHGGYEMNTRIRSVLHGMGFGEFPPETPIATLSGGQKTRLALARI 179 IR+ L F P+ +LSGG+K RLALA++ Sbjct: 423 ------------------------EIRTCLGNFLFSGDDVLKPVHSLSGGEKARLALAKL 458 Query: 180 LLQAPDLLMLDEPTNHLDIETLTWLEDYLRSYAGGILVVSHDRYFLDRLVTTIVEIERHQ 239 +LQ + L+LDEPTNHLD+++ LE+ L Y G +L VSHDRYF++R+ T ++E+ Sbjct: 459 MLQKANFLILDEPTNHLDLDSKEVLENALIDYPGTLLFVSHDRYFINRIATRVLELSSSH 518 Query: 240 SRKYTGNYSRYVDQKAAEYEIRLKQYEKQQEEISRMEDFVQRNIVRA--STTKRAQSRRK 297 +Y G+Y Y ++K + E+ + QQEE + V+ + R+ + + R+ Sbjct: 519 IEEYLGDYDYYTEKKTEQLEL---EKMNQQEETDKTPATVKSDSKRSYEEEKEWKKKERQ 575 Query: 298 ALDKMERIDKPLGDLKKASFSFEPDFMSGKEVLQVRDVAVAFSEKAEPL 346 L ++E I+ + +++ + S + + EV Q + A E L Sbjct: 576 RLRRIEEIETTVQTIEE-NISRNDELLCDPEVYQDHEKVQAIHADNEKL 623 >ref|NP_241416.1| ABC transporter (ATP-binding protein) [Bacillus halodurans] pir||F83718 ABC transporter (ATP-binding protein) BH0550 [imported] - Bacillus halodurans (strain C-125) dbj|BAB04269.1| ABC transporter (ATP-binding protein) [Bacillus halodurans] Length = 642 Score = 633 bits (1632), Expect = e-180, Method: Compositional matrix adjust. Identities = 317/542 (58%), Positives = 409/542 (75%), Gaps = 3/542 (0%) Query: 1 MLLQATGITKSYGIQSVLDGISLQVNEKERVGLVGVNGAGKSTFLQILAGEMSFDSGQIH 60 ++LQ ITKS+G +++L I L+V +RV LVG NGAGKST L+I+A ++S+DSG + Sbjct: 2 IVLQCVNITKSFGAETILSNIKLEVKTGDRVALVGRNGAGKSTLLKIIADKLSYDSGDLI 61 Query: 61 KSKETTIGYLAQNSGLQSDKTIQEEMLAVFSPLIEAEAELRQLEADIADPGLADDPKRYE 120 K IGYL Q++GL+SD TI +EML+VF PL + E LR++E +A+P L ++ YE Sbjct: 62 IPKGVEIGYLEQHTGLESDLTIWDEMLSVFEPLQQMERRLRKMEEQMANPALLNNASSYE 121 Query: 121 DLLERYARRSDWFKDHGGYEMNTRIRSVLHGMGFGEFP-PETPIATLSGGQKTRLALARI 179 LLE Y FKD GGY+ IR+VL G+ F +FP ET IATLSGGQKTRLAL ++ Sbjct: 122 KLLEEYDSLQVEFKDRGGYQYEADIRNVLAGLQFADFPYHETKIATLSGGQKTRLALGKL 181 Query: 180 LLQAPDLLMLDEPTNHLDIETLTWLEDYLRSYAGGILVVSHDRYFLDRLVTTIVEIERHQ 239 LL PDLL+LDEPTNHLDI+TL+WLE YL +Y G IL+VSHDRYFLD+LVT + EI R + Sbjct: 182 LLTKPDLLILDEPTNHLDIDTLSWLEQYLSAYPGAILIVSHDRYFLDKLVTQVYEISRTK 241 Query: 240 SRKYTGNYSRYVDQKAAEYEIRLKQYEKQQEEISRMEDFVQRNIVRASTTKRAQSRRKAL 299 S KY GNYS Y+D+KA YE LK++EKQQ+E++++EDF+QRNI RASTTKRAQSRRKAL Sbjct: 242 STKYVGNYSHYLDEKALRYEQELKEFEKQQKEVAKLEDFIQRNIARASTTKRAQSRRKAL 301 Query: 300 DKMERIDKPLGDLKKASFSFEPDFMSGKEVLQVRDVAVAFSEKAEPLFRNASFELRRGET 359 ++M ++D+P D K ASF F+ + SG +VL+VRD+ FS +PLF +L RGE+ Sbjct: 302 ERMTKLDRPNSDEKSASFFFDIERQSGNDVLRVRDLT--FSYDGDPLFSRLDLDLNRGES 359 Query: 360 AALIGPNGIGKSTLLQCLTGTREPSTGTVNWGTKVKIAYYDQEQTRLNPRNTVLEELWSE 419 ALIGPNG GKSTLL+ LT + GT+ +G+ VKI YYDQEQ L+ VL ELW + Sbjct: 360 VALIGPNGAGKSTLLKLLTKKLQADQGTIEYGSHVKIGYYDQEQANLHSNKQVLYELWDD 419 Query: 420 YPMLEEARIRTILGNFLFSGEDVLKKVAALSGGEKARVSLSKLMLRGANMLILDEPTNHL 479 YP+L E IRT+LGNFLFSGEDVLK V+ LSGGEKAR++L+KLM+ AN+LI+DEPTNHL Sbjct: 420 YPLLPERDIRTVLGNFLFSGEDVLKVVSDLSGGEKARLALAKLMMEKANLLIMDEPTNHL 479 Query: 480 DLMSREVLESALIDFEGTLLFISHDRYFLNKMAERVLELHPGGIDQYLGNYDDYIEKKRE 539 DL S+EVLE+ALID+ GTLLF+SHDRYFLN+MA R++EL G +LG+YD Y+EKK+E Sbjct: 480 DLDSKEVLENALIDYPGTLLFVSHDRYFLNRMATRIIELDGGQPSVFLGDYDYYLEKKQE 539 Query: 540 LE 541 ++ Sbjct: 540 IK 541 >ref|ZP_00182836.1| hypothetical protein Exigu182001 [Exiguobacterium sp. 255-15] Length = 635 Score = 624 bits (1609), Expect = e-177, Method: Compositional matrix adjust. Identities = 301/546 (55%), Positives = 412/546 (75%), Gaps = 7/546 (1%) Query: 1 MLLQATGITKSYGIQSVLDGISLQVNEKERVGLVGVNGAGKSTFLQILAGEMSFDSGQIH 60 +LLQ ++KS+G++ +LD I L+V E++R+ LVG NGAGKST L+I+AGE+S DSG+I Sbjct: 4 ILLQVNQLSKSFGVEPILDNIKLEVQERDRIALVGRNGAGKSTLLKIIAGELSHDSGEIM 63 Query: 61 KSKETTIGYLAQNSGLQSDKTIQEEMLAVFSPLIEAEAELRQLEADIADPGLADDPKRYE 120 KSKE IGYLAQ+SGL+S+++I EML VF L + E LR++E ++ + +DP Y+ Sbjct: 64 KSKEVRIGYLAQDSGLESNESIWNEMLTVFEHLQDQERALRRMEIEMGMEHILNDPAAYD 123 Query: 121 DLLERYARRSDWFKDHGGYEMNTRIRSVLHGMGFGEFPPETP--IATLSGGQKTRLALAR 178 LL+ Y + F + GGY+ IRSVLHGM F +P + I TLSGGQ+TRLALA+ Sbjct: 124 RLLKTYDQAQHDFSEAGGYQFEANIRSVLHGMRF--YPDDYSRRIQTLSGGQRTRLALAK 181 Query: 179 ILLQAPDLLMLDEPTNHLDIETLTWLEDYLRSYAGGILVVSHDRYFLDRLVTTIVEIERH 238 +LLQAP+LL+LDEPTNHLDI+TL+WLE YL Y G +L+VSHDRYFLD++V + E+ R+ Sbjct: 182 MLLQAPELLILDEPTNHLDIDTLSWLESYLSGYRGAVLIVSHDRYFLDQVVNVVYELSRN 241 Query: 239 QSRKYTGNYSRYVDQKAAEYEIRLKQYEKQQEEISRMEDFVQRNIVRASTTKRAQSRRKA 298 SRK+TGNY++Y++QKAA YE +KQ+E+QQE+I++M+DF+QRNI RA+TTKRAQS RK Sbjct: 242 VSRKFTGNYTKYLEQKAALYEQEMKQFEQQQEDIAKMQDFIQRNIARATTTKRAQSVRKR 301 Query: 299 LDKMERIDKPLGDLKKASFSFEPDFMSGKEVLQVRDVAVAFSEKAEPLFRNASFELRRGE 358 L+K++RID+P GD + SF + SG +VLQV +AV + E + +N +F L+R E Sbjct: 302 LEKVDRIDRPDGDERSTVLSFPIEKQSGNDVLQVNQLAVGYE---EAVSKNITFRLQRAE 358 Query: 359 TAALIGPNGIGKSTLLQCLTGTREPSTGTVNWGTKVKIAYYDQEQTRLNPRNTVLEELWS 418 + AL+GPNGIGKSTLL+ L G +P G +GT V I YYDQEQ LN RN V++E+W+ Sbjct: 359 SLALVGPNGIGKSTLLKVLVGRLKPLFGDYRFGTGVSIGYYDQEQAELNDRNRVIDEIWN 418 Query: 419 EYPMLEEARIRTILGNFLFSGEDVLKKVAALSGGEKARVSLSKLMLRGANMLILDEPTNH 478 E+P++ E +R++LG FLFSG+DV K V LSGGE+ R++L+KL LR N+L+LDEPTNH Sbjct: 419 EWPLMREQEVRSVLGQFLFSGDDVFKLVHELSGGERGRLALAKLKLRKTNLLVLDEPTNH 478 Query: 479 LDLMSREVLESALIDFEGTLLFISHDRYFLNKMAERVLELHPGGIDQYLGNYDDYIEKKR 538 LDL S+ VLE+AL+D+EGTLLF+SHDRYF++++A RV+E+ G+ YLG+Y Y+EKK Sbjct: 479 LDLDSKMVLENALVDYEGTLLFVSHDRYFIDRVATRVIEMSSDGVTDYLGDYSYYMEKKA 538 Query: 539 ELEAIA 544 E E IA Sbjct: 539 EKEEIA 544 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 95/324 (29%), Positives = 150/324 (46%), Gaps = 65/324 (20%) Query: 2 LLQATGITKSYGIQSVLDGISLQVNEKERVGLVGVNGAGKSTFLQILAGEMSFDSGQIHK 61 +LQ + Y ++V I+ ++ E + LVG NG GKST L++L G + G Sbjct: 332 VLQVNQLAVGYE-EAVSKNITFRLQRAESLALVGPNGIGKSTLLKVLVGRLKPLFGDYRF 390 Query: 62 SKETTIGYLAQNSGLQSDKT-IQEEMLAVFSPLIEAEAELRQLEADIADPGLADDPKRYE 120 +IGY Q +D+ + +E+ + + E E Sbjct: 391 GTGVSIGYYDQEQAELNDRNRVIDEIWNEWPLMREQE----------------------- 427 Query: 121 DLLERYARRSDWFKDHGGYEMNTRIRSVLHGMGFGEFPPETPIATLSGGQKTRLALARIL 180 +RSVL F + LSGG++ RLALA++ Sbjct: 428 ------------------------VRSVLGQFLFSGDDVFKLVHELSGGERGRLALAKLK 463 Query: 181 LQAPDLLMLDEPTNHLDIETLTWLEDYLRSYAGGILVVSHDRYFLDRLVTTIVEIERHQS 240 L+ +LL+LDEPTNHLD+++ LE+ L Y G +L VSHDRYF+DR+ T ++E+ Sbjct: 464 LRKTNLLVLDEPTNHLDLDSKMVLENALVDYEGTLLFVSHDRYFIDRVATRVIEMSSDGV 523 Query: 241 RKYTGNYSRYVDQKAAEYEIRLKQYEKQQEEISRMEDFVQRNIVRASTT---KRAQSR-R 296 Y G+YS Y+++KA ++EEI+R+E + I AST K AQ R Sbjct: 524 TDYLGDYSYYMEKKA------------EKEEIARLEAEEAKAIKVASTKTIDKEAQKEAR 571 Query: 297 KALDKMERIDKPLGDLKKASFSFE 320 K ++E++++ + L+ S E Sbjct: 572 KKKQQLEQLEQEIERLENRSVEIE 595 >ref|NP_976612.1| ABC transporter, ATP-binding protein [Bacillus cereus ATCC 10987] gb|AAS39220.1| ABC transporter, ATP-binding protein [Bacillus cereus ATCC 10987] Length = 662 Score = 621 bits (1602), Expect = e-176, Method: Compositional matrix adjust. Identities = 300/540 (55%), Positives = 402/540 (74%), Gaps = 2/540 (0%) Query: 1 MLLQATGITKSYGIQSVLDGISLQVNEKERVGLVGVNGAGKSTFLQILAGEMSFDSGQIH 60 +LLQ ++K YG +++L I L+V K+R+ LVG NGAGKST L+I+AGE+S D G+I Sbjct: 20 ILLQVNALSKLYGAETILANIKLEVQTKDRIALVGRNGAGKSTLLKIIAGELSHDDGEII 79 Query: 61 KSKETTIGYLAQNSGLQSDKTIQEEMLAVFSPLIEAEAELRQLEADIADPGLADDPKRYE 120 K K+ +IGYLAQN+GL++ TI +EML VF+ L + E +LR+LE ++ + YE Sbjct: 80 KPKDVSIGYLAQNTGLETSLTIWDEMLTVFTHLQQMETKLRRLEQEMGKEENFSNEATYE 139 Query: 121 DLLERYARRSDWFKDHGGYEMNTRIRSVLHGMGFGEFPPETPIATLSGGQKTRLALARIL 180 LL Y + +KD GGY+ IRS+L G+GF +T I+TLSGGQKTRLAL ++L Sbjct: 140 RLLADYDQLQLDYKDQGGYQYEADIRSILSGLGFPVETHQTTISTLSGGQKTRLALGKLL 199 Query: 181 LQAPDLLMLDEPTNHLDIETLTWLEDYLRSYAGGILVVSHDRYFLDRLVTTIVEIERHQS 240 L PDLL+LDEPTNHLDIETLTWLE YL+ Y G IL+VSHDRYFLD+LVT + EI +S Sbjct: 200 LTKPDLLILDEPTNHLDIETLTWLEQYLQGYPGAILIVSHDRYFLDKLVTQVYEISNKES 259 Query: 241 RKYTGNYSRYVDQKAAEYEIRLKQYEKQQEEISRMEDFVQRNIVRASTTKRAQSRRKALD 300 R++ GNYS+Y+D K+A YE +K+YEKQQ+EI+++EDFVQ+NI RASTTKRAQSRRK LD Sbjct: 260 RRFVGNYSKYLDLKSALYEQEMKRYEKQQDEIAKLEDFVQKNIARASTTKRAQSRRKQLD 319 Query: 301 KMERIDKPLGDLKKASFSFEPDFMSGKEVLQVRDVAVAFSEKAEPLFRNASFELRRGETA 360 +ME + +PLGD K ASF F+ + SG +VLQV+D + + + +P+ + + L RG++ Sbjct: 320 RMELLTRPLGDSKSASFHFDIEKQSGNDVLQVKDATIGYDK--DPIIEHVTMRLTRGDSV 377 Query: 361 ALIGPNGIGKSTLLQCLTGTREPSTGTVNWGTKVKIAYYDQEQTRLNPRNTVLEELWSEY 420 AL+GPNGIGKSTLL+ + G V++G+ V + YYDQEQ L VL ELW EY Sbjct: 378 ALVGPNGIGKSTLLKSIVNKLPLLHGDVSFGSNVSVGYYDQEQANLTSSKRVLNELWDEY 437 Query: 421 PMLEEARIRTILGNFLFSGEDVLKKVAALSGGEKARVSLSKLMLRGANMLILDEPTNHLD 480 P+ E IRTILGNFLF+G+DVLK V++LSGG+KAR++L+KLM++ +N+LILDEPTNHLD Sbjct: 438 PLQPEKEIRTILGNFLFTGDDVLKPVSSLSGGQKARLALAKLMMQKSNLLILDEPTNHLD 497 Query: 481 LMSREVLESALIDFEGTLLFISHDRYFLNKMAERVLELHPGGIDQYLGNYDDYIEKKREL 540 L S+E+LE+ALID+ GTLLF+SHDRYF+N++ V+EL G +YLG+YD Y+EKK E+ Sbjct: 498 LNSKEILENALIDYPGTLLFVSHDRYFINRVTTTVVELSTEGAQEYLGDYDYYVEKKNEM 557 >ref|NP_830141.1| ABC transporter ATP-binding protein uup [Bacillus cereus ATCC 14579] gb|AAP07342.1| ABC transporter ATP-binding protein uup [Bacillus cereus ATCC 14579] Length = 644 Score = 621 bits (1602), Expect = e-176, Method: Compositional matrix adjust. Identities = 300/540 (55%), Positives = 399/540 (73%), Gaps = 2/540 (0%) Query: 1 MLLQATGITKSYGIQSVLDGISLQVNEKERVGLVGVNGAGKSTFLQILAGEMSFDSGQIH 60 +LLQ ++K YG +++L I L+V K+R+ LVG NGAGKST L+I+AGE+S D G+I Sbjct: 5 ILLQVNALSKLYGAETILANIKLEVQTKDRIALVGRNGAGKSTLLKIIAGELSHDGGEII 64 Query: 61 KSKETTIGYLAQNSGLQSDKTIQEEMLAVFSPLIEAEAELRQLEADIADPGLADDPKRYE 120 K K+ +IGYLAQN+GL++ TI +EML VF+ L + E +LR+LE ++ + YE Sbjct: 65 KPKDVSIGYLAQNTGLETSLTIWDEMLTVFTHLQQMETKLRRLEQEMGKEKNFSNEATYE 124 Query: 121 DLLERYARRSDWFKDHGGYEMNTRIRSVLHGMGFGEFPPETPIATLSGGQKTRLALARIL 180 LL Y + +KD GGY+ IRS+L G+GF +T I+TLSGGQKTRLAL ++L Sbjct: 125 RLLADYDQLQLNYKDQGGYQYEADIRSILSGLGFPVETHQTTISTLSGGQKTRLALGKLL 184 Query: 181 LQAPDLLMLDEPTNHLDIETLTWLEDYLRSYAGGILVVSHDRYFLDRLVTTIVEIERHQS 240 L PDLL+LDEPTNHLDIETLTWLE YL+ Y G IL+VSHDRYFLD+LVT + EI +S Sbjct: 185 LTKPDLLILDEPTNHLDIETLTWLEQYLQGYPGAILIVSHDRYFLDKLVTQVYEISNKES 244 Query: 241 RKYTGNYSRYVDQKAAEYEIRLKQYEKQQEEISRMEDFVQRNIVRASTTKRAQSRRKALD 300 R++ GNYS+Y+D K+A YE +K+YEKQQ+EI+++EDFVQ+NI RASTTKRAQSRRK LD Sbjct: 245 RRFVGNYSKYLDLKSALYEQEMKRYEKQQDEIAKLEDFVQKNIARASTTKRAQSRRKQLD 304 Query: 301 KMERIDKPLGDLKKASFSFEPDFMSGKEVLQVRDVAVAFSEKAEPLFRNASFELRRGETA 360 +ME + +PLGD K ASF F+ + SG +VLQV D + + P+ + + L RG++ Sbjct: 305 RMELLTRPLGDSKSASFHFDIEKQSGNDVLQVNDATIGYD--GNPIIEHVTMRLTRGDSV 362 Query: 361 ALIGPNGIGKSTLLQCLTGTREPSTGTVNWGTKVKIAYYDQEQTRLNPRNTVLEELWSEY 420 AL+GPNGIGKSTLL+ + G V++G+ V + YYDQEQ L VL ELW EY Sbjct: 363 ALVGPNGIGKSTLLKSIVNKLPLLNGDVSFGSNVSVGYYDQEQANLTSSKRVLNELWDEY 422 Query: 421 PMLEEARIRTILGNFLFSGEDVLKKVAALSGGEKARVSLSKLMLRGANMLILDEPTNHLD 480 P+ E IRTILGNFLF+G+DVLK V++LSGG+KAR++L+KLM++ +N+LILDEPTNHLD Sbjct: 423 PLQPEKEIRTILGNFLFTGDDVLKPVSSLSGGQKARLALAKLMMQKSNLLILDEPTNHLD 482 Query: 481 LMSREVLESALIDFEGTLLFISHDRYFLNKMAERVLELHPGGIDQYLGNYDDYIEKKREL 540 L S+E+LE+ALID+ GTLLF+SHDRYF+N++ V+EL G +YLG+YD Y+EKK E+ Sbjct: 483 LNSKEILENALIDYPGTLLFVSHDRYFINRVTTTVVELSTEGAQEYLGDYDYYVEKKNEM 542 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 89/320 (27%), Positives = 161/320 (50%), Gaps = 50/320 (15%) Query: 2 LLQATGITKSYGIQSVLDGISLQVNEKERVGLVGVNGAGKSTFLQILAGEMSFDSGQIHK 61 +LQ T Y +++ +++++ + V LVG NG GKST L+ + ++ +G + Sbjct: 333 VLQVNDATIGYDGNPIIEHVTMRLTRGDSVALVGPNGIGKSTLLKSIVNKLPLLNGDVSF 392 Query: 62 SKETTIGYLAQ-NSGLQSDKTIQEEMLAVFSPLIEAEAELRQLEADIADPGLADDPKRYE 120 ++GY Q + L S K + E+ + PL + E E+R + + G + Sbjct: 393 GSNVSVGYYDQEQANLTSSKRVLNELWDEY-PL-QPEKEIRTILGNFLFTG--------D 442 Query: 121 DLLERYARRSDWFKDHGGYEMNTRIRSVLHGMGFGEFPPETPIATLSGGQKTRLALARIL 180 D+L+ P+++LSGGQK RLALA+++ Sbjct: 443 DVLK-------------------------------------PVSSLSGGQKARLALAKLM 465 Query: 181 LQAPDLLMLDEPTNHLDIETLTWLEDYLRSYAGGILVVSHDRYFLDRLVTTIVEIERHQS 240 +Q +LL+LDEPTNHLD+ + LE+ L Y G +L VSHDRYF++R+ TT+VE+ + Sbjct: 466 MQKSNLLILDEPTNHLDLNSKEILENALIDYPGTLLFVSHDRYFINRVTTTVVELSTEGA 525 Query: 241 RKYTGNYSRYVDQKAAEYEIRLKQYEKQQEEISRMEDFVQRNIVRASTTKRAQSRRKALD 300 ++Y G+Y YV++K I + E+Q+ ++ + Q + +R + R+ Sbjct: 526 QEYLGDYDYYVEKKNE--MIERAELEQQESDVPVQKVVAQEKLNYLEEKERKKLERQRTR 583 Query: 301 KMERIDKPLGDLKKASFSFE 320 K+E +++ + +L++ + E Sbjct: 584 KIEELEQSIVELEEEIATLE 603 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.135 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 802,657,374 Number of extensions: 33740402 Number of successful extensions: 236598 Number of sequences better than 1.0e-05: 9778 Number of HSP's gapped: 226471 Number of HSP's successfully gapped: 12187 Length of query: 565 Length of database: 757,237,578 Length adjustment: 131 Effective length of query: 434 Effective length of database: 401,559,609 Effective search space: 174276870306 Effective search space used: 174276870306 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 129 (54.3 bits)