BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0370.0022.p (161 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00181086.1| hypothetical protein Mther099001 [Moorella th... 156 2e-37 ref|NP_348641.1| Molybdopterin biosynthesis enzyme, moaB [Clostr... 125 3e-28 ref|ZP_00080208.1| COG0521: Molybdopterin biosynthesis enzymes [... 124 5e-28 ref|NP_953750.1| molybdenum cofactor biosynthesis protein B [Geo... 120 1e-26 ref|NP_223453.1| MOLYBDOPTERIN BIOSYNTHESIS PROTEIN [Helicobacte... 119 2e-26 >ref|ZP_00181086.1| hypothetical protein Mther099001 [Moorella thermoacetica ATCC 39073] Length = 162 Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 85/155 (54%), Positives = 103/155 (66%), Gaps = 2/155 (1%) Query: 4 KTAILTASDKGARGEREDTSAQVXXXXXXXXXXXXXXXXXIVPDEQDEIIAALIELTDYF 63 + AILTASDKG+RGERED SA + +VPDE+ + A L E D Sbjct: 3 RVAILTASDKGSRGEREDKSATIIREMVADLGEVVAYA--VVPDERQLLAAKLREFCDEV 60 Query: 64 QADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRSTVMQKNRAVMLFRGICGIRG 123 ADLVLTTGGT + RDVTPEATR VI+REVPGL EAMR+ ++ ML R I GIRG Sbjct: 61 GADLVLTTGGTGFSPRDVTPEATRDVIDREVPGLPEAMRAAGLKVTPQAMLSRAIAGIRG 120 Query: 124 RTLIVNLPGTPKGVHENLAAIMDQLPEALLMVTGQ 158 ++LIVNLPG+PKGV ENLAAI+ LP L ++ G+ Sbjct: 121 KSLIVNLPGSPKGVRENLAAILPALPHGLAILKGE 155 >ref|NP_348641.1| Molybdopterin biosynthesis enzyme, moaB [Clostridium acetobutylicum] pir||B97149 molybdopterin biosynthesis enzyme, moaB [imported] - Clostridium acetobutylicum gb|AAK79981.1| Molybdopterin biosynthesis enzyme, moaB [Clostridium acetobutylicum] Length = 165 Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/154 (43%), Positives = 93/154 (60%), Gaps = 1/154 (0%) Query: 4 KTAILTASDKGARGEREDTSAQVXXXXXXXXXXXXXXXXXIVPDEQDEIIAALIELTDYF 63 K AILT SDKG+RGER D + + I+PDE+ +I LI L D Sbjct: 3 KIAILTISDKGSRGERVDGTG-LELKKLLANLGYEISFYKIIPDERRDIEKELIYLADEL 61 Query: 64 QADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRSTVMQKNRAVMLFRGICGIRG 123 + +L+LT GGT A RDVTPEAT+ VIE++VPG+SE MR ++ N ML RG+ GIR Sbjct: 62 KVNLILTNGGTGFAKRDVTPEATKSVIEKDVPGISEVMRMNSVKINSHAMLSRGVSGIRK 121 Query: 124 RTLIVNLPGTPKGVHENLAAIMDQLPEALLMVTG 157 +LI+NLPG+ K E+L ++ +P + ++ G Sbjct: 122 DSLIINLPGSTKAAIESLEFVLPAIPHGIDILNG 155 >ref|ZP_00080208.1| COG0521: Molybdopterin biosynthesis enzymes [Geobacter metallireducens] Length = 195 Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 67/157 (42%), Positives = 91/157 (57%), Gaps = 1/157 (0%) Query: 4 KTAILTASDKGARGEREDTSAQVXXXXXXXXXXXXXXXXXIVPDEQDEIIAALIELTDYF 63 + AILT SDKG+RGER D S I+PDE D I A L + D Sbjct: 34 RAAILTLSDKGSRGERADASGPALSAWLAERGVETAHTE-IIPDEADLITATLSQWADSG 92 Query: 64 QADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRSTVMQKNRAVMLFRGICGIRG 123 DL+LTTGGT ++ RDVTP+AT +V++R +PG E MR ++K M+ R + GIR Sbjct: 93 LYDLILTTGGTGVSPRDVTPDATMKVLDRVIPGFGEVMRMRSLEKTPHAMISRAVAGIRK 152 Query: 124 RTLIVNLPGTPKGVHENLAAIMDQLPEALLMVTGQYR 160 + LI+NLPG+P+G ENL A+ +P A+ + G R Sbjct: 153 QALIINLPGSPRGAIENLEAVWPAVPHAVEKIQGDTR 189 >ref|NP_953750.1| molybdenum cofactor biosynthesis protein B [Geobacter sulfurreducens PCA] gb|AAR36077.1| molybdenum cofactor biosynthesis protein B [Geobacter sulfurreducens PCA] Length = 163 Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/157 (44%), Positives = 90/157 (57%), Gaps = 1/157 (0%) Query: 4 KTAILTASDKGARGEREDTSAQVXXXXXXXXXXXXXXXXXIVPDEQDEIIAALIELTDYF 63 K AILT SDKG+RGER D S I+PDE D I A L D Sbjct: 2 KAAILTLSDKGSRGERADASGPALVAWLAERGVETVRTE-IIPDEADLISARLAAWADAG 60 Query: 64 QADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRSTVMQKNRAVMLFRGICGIRG 123 ADL+LTTGGT ++ RDVTP+AT +++R +PG E MR +QK M+ R + GIRG Sbjct: 61 DADLILTTGGTGVSPRDVTPDATMTILDRLIPGFGEVMRMRSLQKTPNAMISRAVAGIRG 120 Query: 124 RTLIVNLPGTPKGVHENLAAIMDQLPEALLMVTGQYR 160 LI+NLPG+P+G ENL A+ +P A+ + G R Sbjct: 121 TALIINLPGSPRGAVENLEAVWPAVPHAVEKIQGDTR 157 >ref|NP_223453.1| MOLYBDOPTERIN BIOSYNTHESIS PROTEIN [Helicobacter pylori J99] sp|Q9ZL45|MOG_HELPJ Molybdopterin biosynthesis mog protein pir||F71893 molybdopterin biosynthesis protein - Helicobacter pylori (strain J99) gb|AAD06321.1| MOLYBDOPTERIN BIOSYNTHESIS PROTEIN [Helicobacter pylori J99] Length = 176 Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 93/157 (59%), Gaps = 1/157 (0%) Query: 6 AILTASDKGARGEREDTSAQ-VXXXXXXXXXXXXXXXXXIVPDEQDEIIAALIELTDYFQ 64 +L+ASD+ ++G ED S + + IV DE+D I +LI++ D +Q Sbjct: 7 GVLSASDRASKGVYEDLSGKAIQEVLSEYLLNPLEFHYEIVADERDLIEKSLIKMCDEYQ 66 Query: 65 ADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRSTVMQKNRAVMLFRGICGIRGR 124 DLV+TTGGT A+RD+TPEAT++V ++ +PG E MR T ++ +L R GIR + Sbjct: 67 CDLVVTTGGTGPALRDITPEATKKVCQKMLPGFGELMRMTSLKYVPTAILSRQSAGIRNK 126 Query: 125 TLIVNLPGTPKGVHENLAAIMDQLPEALLMVTGQYRQ 161 +LI+NLPG PK + E L A+ +P + ++ G Y Q Sbjct: 127 SLIINLPGKPKSIRECLEAVFPAIPYCVDLILGNYMQ 163 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.134 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 193,706,445 Number of extensions: 6016996 Number of successful extensions: 14523 Number of sequences better than 1.0e-05: 229 Number of HSP's gapped: 14495 Number of HSP's successfully gapped: 229 Length of query: 161 Length of database: 757,237,578 Length adjustment: 116 Effective length of query: 45 Effective length of database: 442,286,094 Effective search space: 19902874230 Effective search space used: 19902874230 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 120 (50.8 bits)