BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0369.0011.p (202 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00097921.1| COG1131: ABC-type multidrug transport system,... 226 3e-58 ref|NP_148662.1| ATP-binding protein [Aeropyrum pernix] >gi|7445... 162 5e-39 ref|NP_388157.1| Na+ ABC transporter (ATP-binding protein) [Baci... 160 2e-38 ref|NP_148196.1| ATP-binding transport protein [Aeropyrum pernix... 159 4e-38 dbj|BAA95019.1| ATP-binding protein [Streptomyces kasugaensis] 151 9e-36 >ref|ZP_00097921.1| COG1131: ABC-type multidrug transport system, ATPase component [Desulfitobacterium hafniense] Length = 332 Score = 226 bits (575), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 112/173 (64%), Positives = 131/173 (75%) Query: 9 KIYETKNRLGLFRAETRTVTAVQSLTLSIAKGEIVGLLGLNGAGKTTTIRMLSTLLDPTS 68 K++ TK + G +R+ + V AV +L L+I GEIVGLLG+NGAGKTTTI+MLSTLL PT+ Sbjct: 9 KVFVTKEKKGPWRSRKKEVVAVNTLDLAIRPGEIVGLLGINGAGKTTTIKMLSTLLVPTA 68 Query: 69 GSIEIDGMPMADNRRTVQQKVNMIAGGERMLYWRLTGRENLQYFGRLYGLNAAEIRSLSD 128 GSI +DG V++++NMIAGGERMLYWRLT RENL YFG LYGL+ + Sbjct: 69 GSIMVDGTDAVKEPMKVKKRINMIAGGERMLYWRLTARENLAYFGSLYGLSGKALTERIH 128 Query: 129 LLLAEVGLTEAADQPVEQYSKGMKQRLQIARGLINDPEYLFLDEPTLGLDAPI 181 LL V L AAD PVEQYSKGMKQRLQIARGLIN+P YLFLDEPTLGLDAPI Sbjct: 129 RLLQAVELEAAADTPVEQYSKGMKQRLQIARGLINNPSYLFLDEPTLGLDAPI 181 >ref|NP_148662.1| ATP-binding protein [Aeropyrum pernix] pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum pernix (strain K1) dbj|BAA81532.1| 323aa long hypothetical ATP-binding protein [Aeropyrum pernix] Length = 323 Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 82/163 (50%), Positives = 106/163 (65%) Query: 16 RLGLFRAETRTVTAVQSLTLSIAKGEIVGLLGLNGAGKTTTIRMLSTLLDPTSGSIEIDG 75 R+GL RT+ A+ + L + +G + LLG NGAGKTT +++LSTLL P SG + G Sbjct: 15 RMGLLPWRARTIRALDGVDLKVGRGTLFSLLGPNGAGKTTLVKILSTLLLPDSGWARVAG 74 Query: 76 MPMADNRRTVQQKVNMIAGGERMLYWRLTGRENLQYFGRLYGLNAAEIRSLSDLLLAEVG 135 + V+ ++ ++ GGER LYWRL+G +NL +F +LYG+ E + LL VG Sbjct: 75 FDVVREANNVRSRIGVVLGGERALYWRLSGWDNLWFFSQLYGIPPREAKRRVKELLEIVG 134 Query: 136 LTEAADQPVEQYSKGMKQRLQIARGLINDPEYLFLDEPTLGLD 178 L E A VE YSKGMKQRL IARGLINDPE L LDEPT+GLD Sbjct: 135 LEEWAHVRVENYSKGMKQRLHIARGLINDPEVLLLDEPTIGLD 177 >ref|NP_388157.1| Na+ ABC transporter (ATP-binding protein) [Bacillus subtilis] sp|P46903|NATA_BACSU ATP-binding transport protein natA (Na(+) ABC transporter) pir||A69666 Na+ ABC transporter (extrusion) (ATP-binding protein) natA - Bacillus subtilis gb|AAB53022.1| NatA [Bacillus subtilis] dbj|BAA22236.1| NatA [Bacillus subtilis] emb|CAB12069.1| Na+ ABC transporter (ATP-binding protein) [Bacillus subtilis subsp. subtilis str. 168] Length = 246 Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 75/159 (47%), Positives = 112/159 (70%) Query: 20 FRAETRTVTAVQSLTLSIAKGEIVGLLGLNGAGKTTTIRMLSTLLDPTSGSIEIDGMPMA 79 F+ + + V AV+ ++L+I KGE+VG+LG NGAGKTT +RM+++LL+P+ G I +DG Sbjct: 11 FQDKKKVVKAVRDVSLTIEKGEVVGILGENGAGKTTMLRMIASLLEPSQGVITVDGFDTV 70 Query: 80 DNRRTVQQKVNMIAGGERMLYWRLTGRENLQYFGRLYGLNAAEIRSLSDLLLAEVGLTEA 139 V+Q++ ++ GGE LY R+T +ENLQYFGRLYGLN EI++ + L G+ + Sbjct: 71 KQPAEVKQRIGVLFGGETGLYDRMTAKENLQYFGRLYGLNRHEIKARIEDLSKRFGMRDY 130 Query: 140 ADQPVEQYSKGMKQRLQIARGLINDPEYLFLDEPTLGLD 178 ++ V +SKGM+Q++ IAR LI+DP+ + DEPT GLD Sbjct: 131 MNRRVGGFSKGMRQKVAIARALIHDPDIILFDEPTTGLD 169 >ref|NP_148196.1| ATP-binding transport protein [Aeropyrum pernix] pir||C72568 probable ATP-binding transport protein APE1829 - Aeropyrum pernix (strain K1) dbj|BAA80832.1| 345aa long hypothetical ATP-binding transport protein [Aeropyrum pernix] Length = 345 Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 80/160 (50%), Positives = 107/160 (66%), Gaps = 2/160 (1%) Query: 21 RAETRTVTAVQSLTLSIAKGEIVGLLGLNGAGKTTTIRMLSTLLDPTSGSIEIDGMPMAD 80 R R V A++ ++ S+ +GEI LG NGAGKTTT+R+LSTLLDP G + G + Sbjct: 19 RIRRRVVEALKGVSFSVYEGEIYSFLGPNGAGKTTTVRILSTLLDPDGGEARVAGFDVVK 78 Query: 81 NRRTVQQKVNMIAGGERMLYWRLTGRENLQYFGRLYGLNAAEIRSLSDLLLAEVGLTE-- 138 R V++++ ++ ER YW+LTGRENL YFGR+YG+ E++S +L VGLT+ Sbjct: 79 ERWEVRKRIGVMLSVERGFYWKLTGRENLYYFGRIYGIPQGELKSRIKEVLDLVGLTDLG 138 Query: 139 AADQPVEQYSKGMKQRLQIARGLINDPEYLFLDEPTLGLD 178 AD+P E+ S GMK RL +AR L+ DPE L LDEPTLGLD Sbjct: 139 GADKPFEEMSLGMKARLGLARVLLKDPEVLILDEPTLGLD 178 >dbj|BAA95019.1| ATP-binding protein [Streptomyces kasugaensis] Length = 329 Score = 151 bits (381), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 75/165 (45%), Positives = 112/165 (67%), Gaps = 1/165 (0%) Query: 22 AETRTVTAVQSLTLSIAKGEIVGLLGLNGAGKTTTIRMLSTLLDPTSGSIEIDGMPMADN 81 A+ V A+ S+ LS+ +GE G+LG NGAGKTT +R+LST+L PTSG + G + Sbjct: 28 AQDSRVVALDSVNLSVPEGETHGVLGPNGAGKTTLVRILSTMLLPTSGRALVAGHDVTTE 87 Query: 82 RRTVQQKVNMIAGGERMLYWRLTGRENLQYFGRLYGLNAAEIRSLSDLLLAEVGLTEAAD 141 V++++ ++ GG+ LY R+T R+NL ++ +Y ++A+ ++ S LL VGL + AD Sbjct: 88 ADQVRRRIGIVFGGDNGLYTRITARQNLVFWATMYRVDASVVKRRSQELLERVGLADRAD 147 Query: 142 QPVEQYSKGMKQRLQIARGLINDPEYLFLDEPTLGLDAPIXXXXF 186 +PVE +S+GM+QRL +ARGLI DP LFLDEPT+G+D P+ F Sbjct: 148 EPVEGFSRGMRQRLHLARGLIGDPAVLFLDEPTMGMD-PLATRDF 191 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.134 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 256,263,351 Number of extensions: 9509058 Number of successful extensions: 89690 Number of sequences better than 1.0e-05: 14763 Number of HSP's gapped: 76887 Number of HSP's successfully gapped: 15398 Length of query: 202 Length of database: 757,237,578 Length adjustment: 120 Effective length of query: 82 Effective length of database: 431,425,698 Effective search space: 35376907236 Effective search space used: 35376907236 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 123 (52.0 bits)