BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0368.0034.p (907 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||SYBSVS valine-tRNA ligase (EC 6.1.1.9) - Bacillus stearothe... 1242 0.0 sp|P11931|SYV_BACST VALYL-TRNA SYNTHETASE (VALINE--TRNA LIGASE) ... 1239 0.0 ref|NP_980842.1| valyl-tRNA synthetase [Bacillus cereus ATCC 109... 1237 0.0 ref|NP_834177.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 145... 1237 0.0 ref|NP_658489.1| tRNA-synt_1, tRNA synthetases class I (I, L, M ... 1234 0.0 >pir||SYBSVS valine-tRNA ligase (EC 6.1.1.9) - Bacillus stearothermophilus Length = 880 Score = 1242 bits (3213), Expect = 0.0, Method: Compositional matrix adjust. Identities = 586/877 (66%), Positives = 695/877 (79%), Gaps = 5/877 (0%) Query: 30 MPTTYDPKAAEQKWYAYWMEHGFFEAGKRPEAEPYSIVIPPPNVTGMLHIGHALDFTLQD 89 MP YD +A E Y +W++ FFEA P P++IVIPPPNVTG LH+GHA D TLQD Sbjct: 8 MPPKYDHRAVEAGRYEWWLKGKFFEATGDPNKRPFTIVIPPPNVTGKLHLGHAWDTTLQD 67 Query: 90 ILIRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLRQQGISRHDLGREKFLEQVWAWKDQY 149 I+ R KRMQG+D LWLPG DHAGIATQ KVE+KLRQQG+SR+DLGREKFLE+ W WK++Y Sbjct: 68 IITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLRQQGLSRYDLGREKFLEETWKWKEEY 127 Query: 150 AETIHEQWAKMGLSLDYSRERFTFDEGMAAAVRKVFVELYQKGLIYRGKRIINWDPAART 209 A I QWAK+GL LDY+RERFT DEG++ AVR+VFV LY+KGLIYRG+ IINWDP +T Sbjct: 128 AGHIRSQWAKLGLGLDYTRERFTLDEGLSKAVREVFVSLYRKGLIYRGEYIINWDPVTKT 187 Query: 210 ALSDIEVEYKEVNGHLYHLRYPLKDGSGFLTVATTRPETMLGDTAVAVHPEDERYRNLIG 269 ALSDIEV YKEV G LYH+RYPL DGSGF+ VATTRPETMLGDTAVAVHP+DERY++LIG Sbjct: 188 ALSDIEVVYKEVKGALYHMRYPLADGSGFIEVATTRPETMLGDTAVAVHPDDERYKHLIG 247 Query: 270 KTLILPIIGREIPVIADEYVEKDFGSGAVKITPAHDPNDFEVGLRHNLPQINVMDESGTM 329 K + LPI+GREIP+IADEYV+ +FGSGAVKITPAHDPNDFE+G RHNLP+I VM+E GTM Sbjct: 248 KMVKLPIVGREIPIIADEYVDMEFGSGAVKITPAHDPNDFEIGNRHNLPRILVMNEDGTM 307 Query: 330 NEEAGPYQGQDRSECRKNIIADLQEQGVLVSIEDHVHQVGHSERSGAVVEPYLSTQWFVK 389 NE A YQG DR ECRK I+ DLQEQGVL IE+HVH VGHSERSGAV+EPYLSTQWFVK Sbjct: 308 NENAMQYQGLDRFECRKQIVRDLQEQGVLFKIEEHVHSVGHSERSGAVIEPYLSTQWFVK 367 Query: 390 MQPLAEKAIAAQKDGSGVNFVPERFEKTYMNWIENIRDWCISRQLWWGHRIPAWYSESTG 449 M+PLAE AI Q+ V FVPERFEKTY++W+ENIRDWCISRQLWWGHRIPAWY + TG Sbjct: 368 MKPLAEAAIKLQQTDGKVQFVPERFEKTYLHWLENIRDWCISRQLWWGHRIPAWYHKETG 427 Query: 450 EVFVADSEEEARRISGLDDLRQDEDVLDTWFSSNLWPFATLGWPDENSSDYQRYYPNNVL 509 E++V D E +++ QD DVLDTWFSS LWPF+T+GWPD +S DY+RYYP +VL Sbjct: 428 EIYV-DHEPP----KDIENWEQDPDVLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDVL 482 Query: 510 VTGYDIIYFWVARMIFSALEFTGKKPFSDVLIHGLVRDAEGRKMSKSLGNGIDPLDVIEQ 569 VTGYDII+FWV+RMIF LEFTGK+PF DVLIHGLVRDA+GRKMSKSLGNG+DP+DVI+Q Sbjct: 483 VTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNGVDPMDVIDQ 542 Query: 570 YGADAMRYMISTGITAGQDLRFRIEKVEQARNFANKIWNASRFALMNLEGVSFADIDITG 629 YGADA+RY ++TG + GQDLRF EKVE NFANKIWNASRFALMN+ G+++ ++D++G Sbjct: 543 YGADALRYFLATGSSPGQDLRFSTEKVEATWNFANKIWNASRFALMNMGGMTYEELDLSG 602 Query: 630 ELSTADRWILHRLNETSRDITRLIDAYEYGETGRLLYNFIWDDLCDWYIEFSKLTLYGED 689 E + AD WIL RLNET +T+L + YE+GE GR LYNFIWDDLCDWYIE +KL LYG+D Sbjct: 603 EKTVADHWILTRLNETIETVTKLAEKYEFGERGRTLYNFIWDDLCDWYIEMAKLPLYGDD 662 Query: 690 AAAKAKTQSVLAYVLDRTLRLIHPFMPFITEEIWQHLPHEGDTITLAEWPKYEAALEQPQ 749 AAK T+SVLAYVLD T+RL+HPFMPFITEEIWQ+LPHEG++IT+A WP+ L + Sbjct: 663 EAAKKTTRSVLAYVLDNTMRLLHPFMPFITEEIWQNLPHEGESITVAPWPQVRPELSNEE 722 Query: 750 AVAEMNLLMDXXXXXXXXXXXXXXPMSKKVELIIKAASDETLNIIAKNDNYIGRFCNTSS 809 A EM +L+D P SK + L IK + + KN Y+ RFCN S Sbjct: 723 AAEEMRMLVDIIRAVRNVRAEVNTPPSKPIALYIKTKDEHVRAALLKNRAYLERFCNPSE 782 Query: 810 FEAGLEPNTPDKVMSAVITGAELLLPLAGLIDIEQEIIRLEKEVQTLNSEVERVEKKLGN 869 PDK M+AV+TGAEL++PL GLI+IE+EI RLEKE+ N EVERVEKKL N Sbjct: 783 LLIDTNVPAPDKAMTAVVTGAELIMPLEGLINIEEEIKRLEKELDKWNKEVERVEKKLAN 842 Query: 870 QGFVAKAPAKVIEEERAKQADYSAKREKVLARIAELR 906 +GF+AKAPA V+EEER K+ DY KRE V AR+AEL+ Sbjct: 843 EGFLAKAPAHVVEEERRKRQDYIEKREAVKARLAELK 879 >sp|P11931|SYV_BACST VALYL-TRNA SYNTHETASE (VALINE--TRNA LIGASE) (VALRS) gb|AAA22879.1| valyl-tRNA synthetase Length = 880 Score = 1239 bits (3206), Expect = 0.0, Method: Compositional matrix adjust. Identities = 585/877 (66%), Positives = 694/877 (79%), Gaps = 5/877 (0%) Query: 30 MPTTYDPKAAEQKWYAYWMEHGFFEAGKRPEAEPYSIVIPPPNVTGMLHIGHALDFTLQD 89 MP YD +A E Y +W++ FFEA P P++IVIPPPNVTG LH+GHA D TLQD Sbjct: 8 MPPKYDHRAVEAGRYEWWLKGKFFEATGDPNKRPFTIVIPPPNVTGKLHLGHAWDTTLQD 67 Query: 90 ILIRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLRQQGISRHDLGREKFLEQVWAWKDQY 149 I+ R KRMQG+D LWLPG DHAGIATQ KVE+KLRQQG+SR+DLGREKFLE+ W WK++Y Sbjct: 68 IITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLRQQGLSRYDLGREKFLEETWKWKEEY 127 Query: 150 AETIHEQWAKMGLSLDYSRERFTFDEGMAAAVRKVFVELYQKGLIYRGKRIINWDPAART 209 A I QWAK+GL LDY+RERFT DEG++ AVR+VFV LY+KGLIYRG+ IINWDP +T Sbjct: 128 AGHIRSQWAKLGLGLDYTRERFTLDEGLSKAVREVFVSLYRKGLIYRGEYIINWDPVTKT 187 Query: 210 ALSDIEVEYKEVNGHLYHLRYPLKDGSGFLTVATTRPETMLGDTAVAVHPEDERYRNLIG 269 ALSDIEV YKEV G LYH+RYPL DGSGF+ VATTRPETMLGDTAVAVHP+DERY++LIG Sbjct: 188 ALSDIEVVYKEVKGALYHMRYPLADGSGFIEVATTRPETMLGDTAVAVHPDDERYKHLIG 247 Query: 270 KTLILPIIGREIPVIADEYVEKDFGSGAVKITPAHDPNDFEVGLRHNLPQINVMDESGTM 329 K + LPI+GREIP+IADEYV+ +FGSGAVKITPAHDPNDFE+G RHNLP+I VM+E GTM Sbjct: 248 KMVKLPIVGREIPIIADEYVDMEFGSGAVKITPAHDPNDFEIGNRHNLPRILVMNEDGTM 307 Query: 330 NEEAGPYQGQDRSECRKNIIADLQEQGVLVSIEDHVHQVGHSERSGAVVEPYLSTQWFVK 389 NE A YQG DR ECRK I+ DLQEQGVL IE+HVH VGHSERSGAV+EPYLSTQWFVK Sbjct: 308 NENAMQYQGLDRFECRKQIVRDLQEQGVLFKIEEHVHSVGHSERSGAVIEPYLSTQWFVK 367 Query: 390 MQPLAEKAIAAQKDGSGVNFVPERFEKTYMNWIENIRDWCISRQLWWGHRIPAWYSESTG 449 M+PLAE AI Q+ V FVPERFEKTY++W+ENIR WCISRQLWWGHRIPAWY + TG Sbjct: 368 MKPLAEAAIKLQQTDGKVQFVPERFEKTYLHWLENIRHWCISRQLWWGHRIPAWYHKETG 427 Query: 450 EVFVADSEEEARRISGLDDLRQDEDVLDTWFSSNLWPFATLGWPDENSSDYQRYYPNNVL 509 E++V D E +++ QD DVLDTWFSS LWPF+T+GWPD +S DY+RYYP +VL Sbjct: 428 EIYV-DHEPP----KDIENWEQDPDVLDTWFSSALWPFSTMGWPDTDSPDYKRYYPTDVL 482 Query: 510 VTGYDIIYFWVARMIFSALEFTGKKPFSDVLIHGLVRDAEGRKMSKSLGNGIDPLDVIEQ 569 VTGYDII+FWV+RMIF LEFTGK+PF DVLIHGLVRDA+GRKMSKSLGNG+DP+DVI+Q Sbjct: 483 VTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNGVDPMDVIDQ 542 Query: 570 YGADAMRYMISTGITAGQDLRFRIEKVEQARNFANKIWNASRFALMNLEGVSFADIDITG 629 YGADA+RY ++TG + GQDLRF EKVE NFANKIWNASRFALMN+ G+++ ++D++G Sbjct: 543 YGADALRYFLATGSSPGQDLRFSTEKVEATWNFANKIWNASRFALMNMGGMTYEELDLSG 602 Query: 630 ELSTADRWILHRLNETSRDITRLIDAYEYGETGRLLYNFIWDDLCDWYIEFSKLTLYGED 689 E + AD WIL RLNET +T+L + YE+GE GR LYNFIWDDLCDWYIE +KL LYG+D Sbjct: 603 EKTVADHWILTRLNETIETVTKLAEKYEFGERGRTLYNFIWDDLCDWYIEMAKLPLYGDD 662 Query: 690 AAAKAKTQSVLAYVLDRTLRLIHPFMPFITEEIWQHLPHEGDTITLAEWPKYEAALEQPQ 749 AAK T+SVLAYVLD T+RL+HPFMPFITEEIWQ+LPHEG++IT+A WP+ L + Sbjct: 663 EAAKKTTRSVLAYVLDNTMRLLHPFMPFITEEIWQNLPHEGESITVAPWPQVRPELSNEE 722 Query: 750 AVAEMNLLMDXXXXXXXXXXXXXXPMSKKVELIIKAASDETLNIIAKNDNYIGRFCNTSS 809 A EM +L+D P SK + L IK + + KN Y+ RFCN S Sbjct: 723 AAEEMRMLVDIIRAVRNVRAEVNTPPSKPIALYIKTKDEHVRAALLKNRAYLERFCNPSE 782 Query: 810 FEAGLEPNTPDKVMSAVITGAELLLPLAGLIDIEQEIIRLEKEVQTLNSEVERVEKKLGN 869 PDK M+AV+TGAEL++PL GLI+IE+EI RLEKE+ N EVERVEKKL N Sbjct: 783 LLIDTNVPAPDKAMTAVVTGAELIMPLEGLINIEEEIKRLEKELDKWNKEVERVEKKLAN 842 Query: 870 QGFVAKAPAKVIEEERAKQADYSAKREKVLARIAELR 906 +GF+AKAPA V+EEER K+ DY KRE V AR+AEL+ Sbjct: 843 EGFLAKAPAHVVEEERRKRQDYIEKREAVKARLAELK 879 >ref|NP_980842.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987] gb|AAS43450.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987] Length = 881 Score = 1237 bits (3201), Expect = 0.0, Method: Compositional matrix adjust. Identities = 580/883 (65%), Positives = 700/883 (79%), Gaps = 6/883 (0%) Query: 24 GSKQNDMPTTYDPKAAEQKWYAYWMEHGFFEAGKRPEAEPYSIVIPPPNVTGMLHIGHAL 83 + + ++PT YD + E+ Y +W+E +FEA + +PY+IVIPPPNVTG LH+GHA Sbjct: 2 SNTEKNLPTKYDHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAW 61 Query: 84 DFTLQDILIRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLRQQGISRHDLGREKFLEQVW 143 D TLQDIL RTKRMQG+D LWLPG DHAGIATQ KVE KLR++GISR+DLGREKFLE+ W Sbjct: 62 DTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAKVEGKLREEGISRYDLGREKFLEKAW 121 Query: 144 AWKDQYAETIHEQWAKMGLSLDYSRERFTFDEGMAAAVRKVFVELYQKGLIYRGKRIINW 203 WK++YA I +QW K+GL LDYSRERFT DEG++ AV KVFV+LY+KGLIYRG+ IINW Sbjct: 122 EWKEEYASHIRQQWGKVGLGLDYSRERFTLDEGLSDAVNKVFVQLYEKGLIYRGEYIINW 181 Query: 204 DPAARTALSDIEVEYKEVNGHLYHLRYPLKDGSGFLTVATTRPETMLGDTAVAVHPEDER 263 DPA RTALSDIEV +KEV G YH+ YPL DGSG + +ATTRPETMLGDTAVAVHPED+R Sbjct: 182 DPATRTALSDIEVIHKEVQGAFYHMNYPLTDGSGHIRLATTRPETMLGDTAVAVHPEDDR 241 Query: 264 YRNLIGKTLILPIIGREIPVIADEYVEKDFGSGAVKITPAHDPNDFEVGLRHNLPQINVM 323 Y++LIGKT+ LPI+GREIP+IADEYVEKDFG+G VKITPAHDPNDFEVG RH+LP+I VM Sbjct: 242 YKHLIGKTVTLPIVGREIPIIADEYVEKDFGTGVVKITPAHDPNDFEVGNRHDLPRILVM 301 Query: 324 DESGTMNEEAGPYQGQDRSECRKNIIADLQEQGVLVSIEDHVHQVGHSERSGAVVEPYLS 383 +E GTMNE+AG Y G DR ECRK ++ DLQE GVLV IE H+H VGHSERSGAVVEPYLS Sbjct: 302 NEDGTMNEKAGKYNGMDRFECRKALVKDLQEAGVLVEIEPHMHSVGHSERSGAVVEPYLS 361 Query: 384 TQWFVKMQPLAEKAIA-AQKDGSGVNFVPERFEKTYMNWIENIRDWCISRQLWWGHRIPA 442 TQWFVKM PLAEKA+A QK+ V FVPERFE TY+ W+ENI DWCISRQLWWGHRIPA Sbjct: 362 TQWFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPA 421 Query: 443 WYSESTGEVFVADSEEEARRISGLDDLRQDEDVLDTWFSSNLWPFATLGWPDENSSDYQR 502 WY + TGEV+V + +++ QD DVLDTWFSS LWPF+TLGWP+E+++D++R Sbjct: 422 WYHKETGEVYVGTEAP-----ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKR 476 Query: 503 YYPNNVLVTGYDIIYFWVARMIFSALEFTGKKPFSDVLIHGLVRDAEGRKMSKSLGNGID 562 YY + LVTGYDII+FWV+RMIF LEFTG++PF DVLIHGLVRD +GRKMSKSLGNGID Sbjct: 477 YYSTDALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGID 536 Query: 563 PLDVIEQYGADAMRYMISTGITAGQDLRFRIEKVEQARNFANKIWNASRFALMNLEGVSF 622 P++VIE+YGADAMR+ +STG GQDLRF +EKVE NF NKIWNASRF LMN++ + + Sbjct: 537 PMEVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASRFVLMNMDDMKY 596 Query: 623 ADIDITGELSTADRWILHRLNETSRDITRLIDAYEYGETGRLLYNFIWDDLCDWYIEFSK 682 +ID+TGE S AD+WIL RLNET +TR +D YE+GE GR LYNFIWDD CDWYIE +K Sbjct: 597 EEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAK 656 Query: 683 LTLYGEDAAAKAKTQSVLAYVLDRTLRLIHPFMPFITEEIWQHLPHEGDTITLAEWPKYE 742 L LYGED AAK T+S+LAYVLD+T+RL+HPFMPF+TE+IWQHLPHEG++IT+A WP Sbjct: 657 LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPTVR 716 Query: 743 AALEQPQAVAEMNLLMDXXXXXXXXXXXXXXPMSKKVELIIKAASDETLNIIAKNDNYIG 802 L+ +A AEM+LL+D PMSKKV++ IKA + L + KN +YI Sbjct: 717 EDLQDAEAAAEMHLLVDIIRSVRNIRAEVNTPMSKKVQMQIKAKDEAVLAQLTKNSSYIE 776 Query: 803 RFCNTSSFEAGLEPNTPDKVMSAVITGAELLLPLAGLIDIEQEIIRLEKEVQTLNSEVER 862 RFCN S + P+K M+A++TGAEL LPLA LI++++E RLEKE++ + EVER Sbjct: 777 RFCNPSELTIQTDLQAPEKAMTAIVTGAELFLPLADLINLDEERARLEKELEKFDKEVER 836 Query: 863 VEKKLGNQGFVAKAPAKVIEEERAKQADYSAKREKVLARIAEL 905 V+KKL NQGFVAKAPA VIE ERAK+ DY KRE V R+A+L Sbjct: 837 VQKKLSNQGFVAKAPAAVIEGERAKEQDYLEKREAVRQRLADL 879 >ref|NP_834177.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 14579] gb|AAP11378.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 14579] Length = 881 Score = 1237 bits (3200), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/883 (65%), Positives = 700/883 (79%), Gaps = 6/883 (0%) Query: 24 GSKQNDMPTTYDPKAAEQKWYAYWMEHGFFEAGKRPEAEPYSIVIPPPNVTGMLHIGHAL 83 + + ++PT YD + E+ Y +W+E +FEA + +PY+IVIPPPNVTG LH+GHA Sbjct: 2 SNTEKNLPTKYDHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAW 61 Query: 84 DFTLQDILIRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLRQQGISRHDLGREKFLEQVW 143 D TLQDIL RTKRMQG+D LWLPG DHAGIATQ KVE KLR++GISR+DLGREKFLE+ W Sbjct: 62 DTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAKVEGKLREEGISRYDLGREKFLEKAW 121 Query: 144 AWKDQYAETIHEQWAKMGLSLDYSRERFTFDEGMAAAVRKVFVELYQKGLIYRGKRIINW 203 WK++YA I +QW K+GL LDYSRERFT D+G++ AV KVFV+LY+KGLIYRG+ IINW Sbjct: 122 EWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVNKVFVQLYEKGLIYRGEYIINW 181 Query: 204 DPAARTALSDIEVEYKEVNGHLYHLRYPLKDGSGFLTVATTRPETMLGDTAVAVHPEDER 263 DPA RTALSDIEV +KEV G YH+ YPL DGSG + +ATTRPETMLGDTAVAVHPED+R Sbjct: 182 DPATRTALSDIEVIHKEVQGAFYHMNYPLTDGSGHIRLATTRPETMLGDTAVAVHPEDDR 241 Query: 264 YRNLIGKTLILPIIGREIPVIADEYVEKDFGSGAVKITPAHDPNDFEVGLRHNLPQINVM 323 Y++LIGKT+ LPI+GREIP+IADEYVEKDFG+G VKITPAHDPNDFEVG RH+LP+I VM Sbjct: 242 YKHLIGKTVTLPIVGREIPIIADEYVEKDFGTGVVKITPAHDPNDFEVGNRHDLPRILVM 301 Query: 324 DESGTMNEEAGPYQGQDRSECRKNIIADLQEQGVLVSIEDHVHQVGHSERSGAVVEPYLS 383 +E G+MNE+AG Y G DR ECRK ++ DLQE GVLV IE H+H VGHSERSGAVVEPYLS Sbjct: 302 NEDGSMNEKAGKYNGMDRFECRKELVKDLQEAGVLVEIEPHMHSVGHSERSGAVVEPYLS 361 Query: 384 TQWFVKMQPLAEKAIA-AQKDGSGVNFVPERFEKTYMNWIENIRDWCISRQLWWGHRIPA 442 TQWFVKM PLAEKA+A QK+ V FVPERFE TY+ W+ENI DWCISRQLWWGHRIPA Sbjct: 362 TQWFVKMAPLAEKAVALQQKEEEKVTFVPERFENTYLRWMENIHDWCISRQLWWGHRIPA 421 Query: 443 WYSESTGEVFVADSEEEARRISGLDDLRQDEDVLDTWFSSNLWPFATLGWPDENSSDYQR 502 WY + TGEV+V + +++ QD DVLDTWFSS LWPF+TLGWP+E+S+D++R Sbjct: 422 WYHKETGEVYVGTEAP-----ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKR 476 Query: 503 YYPNNVLVTGYDIIYFWVARMIFSALEFTGKKPFSDVLIHGLVRDAEGRKMSKSLGNGID 562 YY + LVTGYDII+FWV+RMIF LEFTG++PF DVLIHGLVRD +GRKMSKSLGNGID Sbjct: 477 YYSTDALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGID 536 Query: 563 PLDVIEQYGADAMRYMISTGITAGQDLRFRIEKVEQARNFANKIWNASRFALMNLEGVSF 622 P+DVIE+YGADAMR+ +STG GQDLRF +EKVE NF NKIWNASRF LMN++ + + Sbjct: 537 PMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASRFVLMNMDDMKY 596 Query: 623 ADIDITGELSTADRWILHRLNETSRDITRLIDAYEYGETGRLLYNFIWDDLCDWYIEFSK 682 +ID+TGE S AD+WIL RLNET +TR +D YE+GE GR LYNFIWDD CDWYIE +K Sbjct: 597 EEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAK 656 Query: 683 LTLYGEDAAAKAKTQSVLAYVLDRTLRLIHPFMPFITEEIWQHLPHEGDTITLAEWPKYE 742 L LYGED AAK T+S+LAYVLD+T+RL+HPFMPF+TE+IWQHLPHEG++IT+A WP Sbjct: 657 LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPTVR 716 Query: 743 AALEQPQAVAEMNLLMDXXXXXXXXXXXXXXPMSKKVELIIKAASDETLNIIAKNDNYIG 802 L+ +A AEM+LL+D PMSKKV++ IKA + L + KN +YI Sbjct: 717 EDLQDTEAAAEMHLLVDIIRSVRNIRAEVNTPMSKKVQMQIKAKDEAVLAQLTKNSSYIE 776 Query: 803 RFCNTSSFEAGLEPNTPDKVMSAVITGAELLLPLAGLIDIEQEIIRLEKEVQTLNSEVER 862 RFCN S + P+K M+A+++GAEL LPLA LI++++E RLEKE++ + EVER Sbjct: 777 RFCNPSELTIQTDLQAPEKAMTAIVSGAELFLPLADLINLDEERARLEKELEKFDKEVER 836 Query: 863 VEKKLGNQGFVAKAPAKVIEEERAKQADYSAKREKVLARIAEL 905 V+KKL NQGFVAKAPA VIE ERAK+ DY KRE V R+A+L Sbjct: 837 VQKKLSNQGFVAKAPAAVIEGERAKEQDYLEKREAVRQRLADL 879 >ref|NP_658489.1| tRNA-synt_1, tRNA synthetases class I (I, L, M and V) [Bacillus anthracis A2012] ref|NP_846903.1| valyl-tRNA synthetase [Bacillus anthracis str. Ames] gb|AAP28389.1| valyl-tRNA synthetase [Bacillus anthracis str. Ames] Length = 881 Score = 1234 bits (3192), Expect = 0.0, Method: Compositional matrix adjust. Identities = 578/883 (65%), Positives = 699/883 (79%), Gaps = 6/883 (0%) Query: 24 GSKQNDMPTTYDPKAAEQKWYAYWMEHGFFEAGKRPEAEPYSIVIPPPNVTGMLHIGHAL 83 + + ++PT YD + E+ Y +W+E +FEA + +PY+IVIPPPNVTG LH+GHA Sbjct: 2 SNTEKNLPTKYDHMSVEEGLYQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAW 61 Query: 84 DFTLQDILIRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLRQQGISRHDLGREKFLEQVW 143 D TLQDIL RTKRMQG+D LWLPG DHAGIATQ KVE KLR++GISR+DLGREKFLE+ W Sbjct: 62 DTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAKVEGKLREEGISRYDLGREKFLEKAW 121 Query: 144 AWKDQYAETIHEQWAKMGLSLDYSRERFTFDEGMAAAVRKVFVELYQKGLIYRGKRIINW 203 WK++YA I +QW K+GL LDYSRERFT D+G++ AV KVFV+LY+KGLIYRG+ IINW Sbjct: 122 EWKEEYASHIRQQWGKVGLGLDYSRERFTLDKGLSDAVNKVFVQLYEKGLIYRGEYIINW 181 Query: 204 DPAARTALSDIEVEYKEVNGHLYHLRYPLKDGSGFLTVATTRPETMLGDTAVAVHPEDER 263 DPA RTALSDIEV +KEV G YH+ YPL DGSG + +ATTRPETMLGDTAVAVHPED+R Sbjct: 182 DPATRTALSDIEVIHKEVQGAFYHMNYPLTDGSGHIRLATTRPETMLGDTAVAVHPEDDR 241 Query: 264 YRNLIGKTLILPIIGREIPVIADEYVEKDFGSGAVKITPAHDPNDFEVGLRHNLPQINVM 323 Y++LIGKT+ LPI+GREIP+IADEYVEKDFG+G VKITPAHDPNDFEVG RH+LP+I VM Sbjct: 242 YKHLIGKTVTLPIVGREIPIIADEYVEKDFGTGVVKITPAHDPNDFEVGNRHDLPRILVM 301 Query: 324 DESGTMNEEAGPYQGQDRSECRKNIIADLQEQGVLVSIEDHVHQVGHSERSGAVVEPYLS 383 +E G+MNE+AG Y G DR ECRK ++ DLQE GVLV IE H+H VGHSERSGAVVEPYLS Sbjct: 302 NEDGSMNEKAGKYNGMDRFECRKALVKDLQEAGVLVEIEPHMHSVGHSERSGAVVEPYLS 361 Query: 384 TQWFVKMQPLAEKAIA-AQKDGSGVNFVPERFEKTYMNWIENIRDWCISRQLWWGHRIPA 442 TQWFVKM PLAEKAI QK+ V FVP+RFE TY+ W+ENI DWCISRQLWWGHRIPA Sbjct: 362 TQWFVKMAPLAEKAIELQQKEEEKVTFVPDRFENTYLRWMENIHDWCISRQLWWGHRIPA 421 Query: 443 WYSESTGEVFVADSEEEARRISGLDDLRQDEDVLDTWFSSNLWPFATLGWPDENSSDYQR 502 WY + TGEV+V + +++ QD DVLDTWFSS LWPF+TLGWP+E+++D++R Sbjct: 422 WYHKETGEVYVGTEAP-----ADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKR 476 Query: 503 YYPNNVLVTGYDIIYFWVARMIFSALEFTGKKPFSDVLIHGLVRDAEGRKMSKSLGNGID 562 YY + LVTGYDII+FWV+RMIF LEFTG++PF DVLIHGLVRD +GRKMSKSLGNGID Sbjct: 477 YYSTDALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGID 536 Query: 563 PLDVIEQYGADAMRYMISTGITAGQDLRFRIEKVEQARNFANKIWNASRFALMNLEGVSF 622 P+DVIE+YGADAMR+ +STG GQDLRF +EKVE NF NKIWNASRF LMN++ + + Sbjct: 537 PMDVIEKYGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASRFVLMNMDDMKY 596 Query: 623 ADIDITGELSTADRWILHRLNETSRDITRLIDAYEYGETGRLLYNFIWDDLCDWYIEFSK 682 +ID+TGE S AD+WIL RLNET +TR +D YE+GE GR LYNFIWDD CDWYIE +K Sbjct: 597 EEIDLTGEKSVADKWILTRLNETIESVTRNMDKYEFGEAGRSLYNFIWDDFCDWYIEMAK 656 Query: 683 LTLYGEDAAAKAKTQSVLAYVLDRTLRLIHPFMPFITEEIWQHLPHEGDTITLAEWPKYE 742 L LYGED AAK T+S+LAYVLD+T+RL+HPFMPF+TE+IWQHLPHEG++IT+A WP Sbjct: 657 LPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFVTEKIWQHLPHEGESITVAAWPTVR 716 Query: 743 AALEQPQAVAEMNLLMDXXXXXXXXXXXXXXPMSKKVELIIKAASDETLNIIAKNDNYIG 802 L+ +A AEM+LL+D PMSKKV++ IKA + L + KN +YI Sbjct: 717 EDLQDTEAAAEMHLLVDIIRSVRNIRAEVNTPMSKKVQMQIKAKDEAVLAQLTKNSSYIE 776 Query: 803 RFCNTSSFEAGLEPNTPDKVMSAVITGAELLLPLAGLIDIEQEIIRLEKEVQTLNSEVER 862 RFCN S + P+K M+A++TGAEL LPLA LI++++E RLEKE++ + EVER Sbjct: 777 RFCNPSELTIQTDLQAPEKAMTAIVTGAELFLPLADLINLDEERARLEKELEKFDKEVER 836 Query: 863 VEKKLGNQGFVAKAPAKVIEEERAKQADYSAKREKVLARIAEL 905 V+KKL NQGFVAKAPA VIE ERAK+ DY KRE V R+A+L Sbjct: 837 VQKKLSNQGFVAKAPAAVIEGERAKEQDYLEKREAVRQRLADL 879 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.135 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,362,557,236 Number of extensions: 58661107 Number of successful extensions: 169364 Number of sequences better than 1.0e-05: 3324 Number of HSP's gapped: 161559 Number of HSP's successfully gapped: 3984 Length of query: 907 Length of database: 757,237,578 Length adjustment: 135 Effective length of query: 772 Effective length of database: 390,699,213 Effective search space: 301619792436 Effective search space used: 301619792436 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)