BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0351.0006.p (207 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_241852.1| BH0986~unknown conserved protein in others [Bac... 204 7e-52 ref|NP_347086.1| Hydrolase of MutT (Nudix) family [Clostridium a... 137 2e-31 ref|ZP_00184484.1| hypothetical protein Exigu019601 [Exiguobacte... 132 7e-30 ref|NP_831732.1| Phosphohydrolase (MutT/nudix family protein) [B... 117 2e-25 ref|NP_655826.1| hypothetical protein predicted by GeneMark [Bac... 114 2e-24 >ref|NP_241852.1| BH0986~unknown conserved protein in others [Bacillus halodurans] pir||B83773 hypothetical protein BH0986 [imported] - Bacillus halodurans (strain C-125) dbj|BAB04705.1| BH0986~unknown conserved protein in others [Bacillus halodurans] Length = 208 Score = 204 bits (520), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 102/203 (50%), Positives = 135/203 (66%) Query: 1 MNEELLATFDEQGNRTGAAPRDEVHRLGLWHETFHCWFVRRDAGGLMIYLQLRSLHKRDY 60 M E L FDE GN G A R+EVH GLWHETFHCWF+ ++ +YLQ+RS K+DY Sbjct: 1 MESERLKIFDEDGNPIGVATREEVHARGLWHETFHCWFMTKEDDTHYLYLQIRSELKKDY 60 Query: 61 AGLLDITAAGHLLADETVVDGVCEVQEELGIAVDFDQLKPLGVIPYQMDTAGFIDRERAH 120 LLDIT AGHLLA+ETV DGV EV EE GIAV F+ LKPLG++ Y + ID+ERAH Sbjct: 61 PNLLDITVAGHLLANETVQDGVREVYEETGIAVSFEVLKPLGIMKYSVTREKLIDQERAH 120 Query: 121 VFVYENHYALSEFTPQQEEVAGIVQARFADFRSFITGGSSKLHVEGFRVEGDGERIVLDE 180 VF+Y++ ++F Q+EEVAG+V+ RFADF F ++ +EGF+ GE++ + E Sbjct: 121 VFLYQDGITFTDFRLQREEVAGMVRVRFADFYMFCLREKEEVVIEGFKQNESGEKMPVLE 180 Query: 181 QVEFSQLVPHEREYYMRVIEGIE 203 +V + VPHE +Y V+ I+ Sbjct: 181 KVGWEHFVPHEPSFYEEVVNRID 203 >ref|NP_347086.1| Hydrolase of MutT (Nudix) family [Clostridium acetobutylicum] sp|Q97LV8|Y446_CLOAB Putative Nudix hydrolase CAC0446 pir||G96954 hydrolase of MutT (Nudix) family [imported] - Clostridium acetobutylicum gb|AAK78426.1| Hydrolase of MutT (Nudix) family [Clostridium acetobutylicum] Length = 206 Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 106/202 (52%) Query: 1 MNEELLATFDEQGNRTGAAPRDEVHRLGLWHETFHCWFVRRDAGGLMIYLQLRSLHKRDY 60 M EE L FDE+ G R EVH G WH TFHCW V+R+ + Q R K Sbjct: 1 MEEEFLDIFDEEERLIGRKSRKEVHEKGYWHSTFHCWVVKREGKKTFLIFQKRHPLKDTA 60 Query: 61 AGLLDITAAGHLLADETVVDGVCEVQEELGIAVDFDQLKPLGVIPYQMDTAGFIDRERAH 120 + D+++AGH+ + E++ DGV E++EELGI ++L +G+I + IDRE H Sbjct: 61 PNMFDVSSAGHIKSGESIEDGVRELKEELGIDAKPNELINIGIIKEEFHIGKNIDREFCH 120 Query: 121 VFVYENHYALSEFTPQQEEVAGIVQARFADFRSFITGGSSKLHVEGFRVEGDGERIVLDE 180 +++Y N + +T Q++EV G+V+ + F+ + EGF V +G R L + Sbjct: 121 IYIYSNKAEIESYTLQRDEVVGLVKIEIDELARFLDNKIDGVFAEGFIVNQEGRRYKLSK 180 Query: 181 QVEFSQLVPHEREYYMRVIEGI 202 + VPH+ YY V+ + Sbjct: 181 ILNKDDFVPHKYGYYKIVLRAL 202 >ref|ZP_00184484.1| hypothetical protein Exigu019601 [Exiguobacterium sp. 255-15] Length = 197 Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 108/200 (54%), Gaps = 14/200 (7%) Query: 4 ELLATFDEQGNRTGAAPRDEVHRLGLWHETFHCWFVRRDAGGLMIYLQLRSLHKRDYAGL 63 E L D G A R ++H+ GLWHETFHC+ + + G ++ LQ R+ K+D+ GL Sbjct: 5 EQLMVVDSTGQPLYPATRKKIHQEGLWHETFHCFVINHEEGHVI--LQQRAKQKKDFPGL 62 Query: 64 LDITAAGHLLADETVVDGVCEVQEELGIAVDFDQLKPLGVIPYQMDTAGFIDRERAHVFV 123 +DITAAGHLLA ET DG+ E++EE+G+ F+QL PLGV ++ DRER H+F+ Sbjct: 63 IDITAAGHLLAGETPRDGIRELEEEIGLVRQFEQLFPLGVFLEELILGDLKDRERVHLFL 122 Query: 124 YENHYALSEFTPQQEEVAGIVQARFADFRSFITGGSSKLHVEGFRVEGDGERIVLDEQVE 183 + L + Q EEV+ ++ F++F + D E I D Sbjct: 123 TDESMPLERYVLQTEEVSRLIALPFSEFARLTDETAETFQT------ADQEIIHRD---- 172 Query: 184 FSQLVPHEREYYMRVIEGIE 203 Q VPH Y+ RV EGI+ Sbjct: 173 --QFVPHPSAYFRRVNEGIQ 190 >ref|NP_831732.1| Phosphohydrolase (MutT/nudix family protein) [Bacillus cereus ATCC 14579] gb|AAP08933.1| Phosphohydrolase (MutT/nudix family protein) [Bacillus cereus ATCC 14579] Length = 202 Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 17/207 (8%) Query: 4 ELLATFDEQGNRTGAAPRDEVHRLGLWHETFHCWFVRRDAGGLMIYLQLRSLHKRDYAGL 63 E L FD + N G RDEVHR G WHETFHCWFV +D + +Y QLRS +K++ + Sbjct: 3 EWLTIFDPERNTLGKKLRDEVHRDGDWHETFHCWFVEKDTEDMFLYFQLRSKNKKEAPCI 62 Query: 64 LDITAAGHLLADETV-VDGVCEVQEELGIAVDFDQLKPLGVIPYQMDTAGFIDRERAHVF 122 DIT+AGH++ DE V + G+ E++EELG++ + L G+ + + DRE H++ Sbjct: 63 WDITSAGHIMHDEDVQIGGLREIEEELGLSFQTNDLTYKGIFKIDYEISNLTDREFCHMY 122 Query: 123 VYENHYALSEFTPQQEEVAGIVQARFADFRSFITGGSSKLHVEGFRVEGDGERIVLDE-- 180 + N F P EEV +++ F + G S L VL+ Sbjct: 123 -FHNVINPLPFAP-GEEVDDVMKVHATSFLQLLKGEISSLTTIS----------VLNNTP 170 Query: 181 -QVEFSQLVPHEREYYMRVIE-GIEVL 205 + F + P++ YY VIE G E+L Sbjct: 171 ITITFEDIYPYDLAYYEFVIEQGKELL 197 >ref|NP_655826.1| hypothetical protein predicted by GeneMark [Bacillus anthracis A2012] ref|NP_844372.1| mutT/nudix family protein [Bacillus anthracis str. Ames] gb|AAP25858.1| mutT/nudix family protein [Bacillus anthracis str. Ames] Length = 202 Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 16/201 (7%) Query: 4 ELLATFDEQGNRTGAAPRDEVHRLGLWHETFHCWFVRRDAGGLMIYLQLRSLHKRDYAGL 63 E L FD + N G RDEVHR G WHETFHCWFV +DA + +Y QLRS +K++ + Sbjct: 3 EWLTIFDSERNTLGKKLRDEVHRDGNWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLI 62 Query: 64 LDITAAGHLLADETV-VDGVCEVQEELGIAVDFDQLKPLGVIPYQMDTAGFIDRERAHVF 122 DIT+AGH++ DE V + G+ E++EELG++ L G+ + + DRE H++ Sbjct: 63 WDITSAGHIMHDEDVQIGGLREIEEELGLSFQTTDLAYKGIFTIDYEISNLTDREFCHMY 122 Query: 123 VYENHYALSEFTPQQEEVAGIVQARFADFRSFITGGSSKLHVEGFRVEGDGERIVLDEQ- 181 + N F P EEV +++ F + K + F VL+ + Sbjct: 123 -FHNVIDSLPFAP-GEEVDDVMKVHATSFLQLL-----KKEISSFTAIS-----VLNNKP 170 Query: 182 --VEFSQLVPHEREYYMRVIE 200 + F + P++ YY VIE Sbjct: 171 ITITFEDIYPYDLAYYEFVIE 191 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.323 0.141 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 312,149,102 Number of extensions: 12585045 Number of successful extensions: 23609 Number of sequences better than 1.0e-05: 11 Number of HSP's gapped: 23609 Number of HSP's successfully gapped: 11 Length of query: 207 Length of database: 757,237,578 Length adjustment: 120 Effective length of query: 87 Effective length of database: 431,425,698 Effective search space: 37534035726 Effective search space used: 37534035726 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 123 (52.0 bits)