BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0351.0005.p (678 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAA22260.1| beta-D-galactosidase 916 0.0 ref|NP_404473.1| puative beta-galactosidase [Yersinia pestis] >g... 787 0.0 ref|NP_561083.1| beta-galactosidase [Clostridium perfringens] >g... 779 0.0 dbj|BAA08485.1| beta-galactosidase [Clostridium perfringens] 778 0.0 ref|NP_242888.1| beta-galactosidase [Bacillus halodurans] >gi|25... 687 0.0 >gb|AAA22260.1| beta-D-galactosidase Length = 690 Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/676 (63%), Positives = 522/676 (77%), Gaps = 6/676 (0%) Query: 1 MLHGADYNPEQWLKYPEVLREDIRMMKLANCNVMSVGIFSWVSLEPEEGVFTFDWLDSVL 60 MLHGADYNPEQWL+YPEVL EDIR+MKLA CNVMS+GIFSWVSLEPEEGV+TF+WLD VL Sbjct: 15 MLHGADYNPEQWLRYPEVLEEDIRLMKLAKCNVMSIGIFSWVSLEPEEGVYTFEWLDQVL 74 Query: 61 NTFAENGIYAFLATPSGARPAWMSEKYPXXXXXXXXXXXXXHGVRHNHCYTSPVYREKTA 120 + FA NGIYAFLATPSGARPAWMS KYP HG RHNHCYTSPVYREK Sbjct: 75 DRFAANGIYAFLATPSGARPAWMSAKYPEVLRVGANRVRNLHGFRHNHCYTSPVYREKVT 134 Query: 121 LLNGKLAERYANHPAVIGWHISNEYGGECHCDLCQASFRDWLKVKYNNSLDEMNHAWWAT 180 +N KLAERY++HPAVIGWHISNE+GG+CHCD CQ +FR W+K KY +LDE+NH+WW T Sbjct: 135 AINTKLAERYSDHPAVIGWHISNEFGGDCHCDYCQDAFRGWVKNKYG-TLDELNHSWWTT 193 Query: 181 FWSHTYTSWNQVESPAPHGETQVHGLNLDWRRFVSESMIDFCQHEIDSVREYNPELPVTT 240 FWSHT T W+QVESPAPHGETQVH +NLDWRRFV++ DF HE ++ NP+LPVTT Sbjct: 194 FWSHTVTDWSQVESPAPHGETQVHAMNLDWRRFVTDQTADFIVHETKPLKAKNPDLPVTT 253 Query: 241 N-MHNIDGVDYRKLAKILDVVSWDAYPDWGYTEDNDDARLAAWTAMHHDMYRTFKH-KPF 298 N M +G++Y K A ILD +SWD+YP W ++ D +LA+ AM HD+ R+ K +PF Sbjct: 254 NLMEFYEGLNYWKFADILDFLSWDSYPTWHDADEED--KLASRIAMMHDIVRSIKGGQPF 311 Query: 299 LLMESTPSLTNWQSVSKLKRPGMHKLSSLQAVAHGSDSVQYFQWRKSRGSSEKFHGAVID 358 LLMESTPS TNWQ VSKLK+PGMH LSSLQAVAHGSDSVQYFQWRKSRGSSEK HGAV+D Sbjct: 312 LLMESTPSSTNWQEVSKLKKPGMHLLSSLQAVAHGSDSVQYFQWRKSRGSSEKLHGAVVD 371 Query: 359 HSGHAETRVFRDVAEVGRTLAELQDVVGTTTPVQTAIIYDWDNRWAIKDAQGIRNSGLKY 418 H G TRVF+DV +VG L ++ +VGT+ P + II+DW+NRWA+ D+QG RN G+KY Sbjct: 372 HVGTEHTRVFQDVTDVGTALEGMEAIVGTSVPAEVGIIFDWENRWAVNDSQGPRNIGVKY 431 Query: 419 EETVLQHYQALWELGIPVDIIGSEEDFSAYKLVIAPMLYLISEDNGKRIEKYVEQGGTFL 478 E+TV HY+A W+ G+ VD+I + D S YKL++APMLYL+ E G+RIE++VE GGTF+ Sbjct: 432 EQTVEAHYEAFWKKGVAVDVIDMDADLSKYKLLVAPMLYLVREGVGERIEQFVENGGTFV 491 Query: 479 GTYWSGVVGETDLCHLGGFPGPLRRTLGIWAEETEGLHSRDLNGLVMDPGNSLKLSGEYD 538 TYWSG+V E DLC LGGFPGPLR+TLGIW+EE +GLH RDLNG++ GN+L+L+ EYD Sbjct: 492 ATYWSGIVNENDLCFLGGFPGPLRKTLGIWSEEIDGLHDRDLNGVIPVKGNALQLNAEYD 551 Query: 539 AHEIAELIHLEGAEALGHYRSDFYAGRPALTVNKLGAGKAYHLATRVKDLQFYVDLYAAI 598 A E+ +LIHLEGAEAL YRSDFYAGRPALTVN+LGAGKAY++ATR K FY D Y ++ Sbjct: 552 AIELCDLIHLEGAEALATYRSDFYAGRPALTVNRLGAGKAYYIATRTK-APFYDDFYGSL 610 Query: 599 AGKERISRTLNSELPVGVTAQLRTDGEHDYVFVQNFSGAEQVVTLDGREYTDVESGAAAP 658 I R L ++LP GVTA +RTDG DYVFVQN++ + V LD + Y+D+ SG Sbjct: 611 IADLGIERALETQLPAGVTAHIRTDGTADYVFVQNYTPETKQVQLDEQSYSDLLSGDMME 670 Query: 659 SELKLAVNGLAILKRG 674 L+L + +L+R Sbjct: 671 GSLELQPYDIQVLRRA 686 >ref|NP_404473.1| puative beta-galactosidase [Yersinia pestis] ref|NP_670536.1| possible beta-d-galactosidase [Yersinia pestis KIM] ref|NP_994824.1| puative beta-galactosidase [Yersinia pestis biovar Mediaevails str. 91001] pir||AH0104 beta-galactosidase (EC 3.2.1.23) [imported] - Yersinia pestis (strain CO92) emb|CAC89699.1| puative beta-galactosidase [Yersinia pestis CO92] gb|AAM86787.1| possible beta-d-galactosidase [Yersinia pestis KIM] gb|AAS63701.1| puative beta-galactosidase [Yersinia pestis biovar Mediaevails str. 91001] Length = 686 Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/675 (55%), Positives = 476/675 (70%), Gaps = 7/675 (1%) Query: 1 MLHGADYNPEQWLKYPEVLREDIRMMKLANCNVMSVGIFSWVSLEPEEGVFTFDWLDSVL 60 +LHGADYNPEQW YP+++ +DI MMK A CNVMSVGIFSWV LEP EG + F WLD ++ Sbjct: 14 LLHGADYNPEQWENYPDIIDKDIAMMKQAKCNVMSVGIFSWVKLEPSEGEYNFSWLDELI 73 Query: 61 NTFAENGIYAFLATPSGARPAWMSEKYPXXXXXXXXXXXXXHGVRHNHCYTSPVYREKTA 120 GI+ FLATPSGARPAWMS+KYP HG RHNHC TSPVYR+K Sbjct: 74 EKLYAAGIHIFLATPSGARPAWMSQKYPEVLRVGRDRVPALHGGRHNHCMTSPVYRQKVR 133 Query: 121 LLNGKLAERYANHPAVIGWHISNEYGGECHCDLCQASFRDWLKVKYNNSLDEMNHAWWAT 180 +N KLAERYA+HPAVIGWHISNEYGGECHC CQ FR WL+ +Y +LD +N AWW+ Sbjct: 134 QINQKLAERYAHHPAVIGWHISNEYGGECHCHSCQQKFRLWLQDRYQ-TLDNLNEAWWSA 192 Query: 181 FWSHTYTSWNQVESPAPHGETQVHGLNLDWRRFVSESMIDFCQHEIDSVREYNPELPVTT 240 FWSHTY+ W+Q+ESPAP GE +HGLNLDWRRF + + +FC E ++ NPELPVTT Sbjct: 193 FWSHTYSDWSQIESPAPQGEVSIHGLNLDWRRFNTAQVTEFCSEEAKPLKAANPELPVTT 252 Query: 241 N-MHNIDGVDYRKLAKILDVVSWDAYPDWGYTEDNDDARLAAWTAMHHDMYRTFKH-KPF 298 N M DY KLA+++D +SWD+YP W + D+ +LA +TAM+HD+ RT K +PF Sbjct: 253 NFMEYFYDYDYWKLAQVIDFISWDSYPMW--HREKDETQLACYTAMYHDLMRTLKQGRPF 310 Query: 299 LLMESTPSLTNWQSVSKLKRPGMHKLSSLQAVAHGSDSVQYFQWRKSRGSSEKFHGAVID 358 +LMESTPS TNWQ SKLK+PGMH LSSLQAVAHG+D+VQYFQWRKSRGS EKFHGAV+D Sbjct: 311 VLMESTPSATNWQPTSKLKKPGMHILSSLQAVAHGADAVQYFQWRKSRGSVEKFHGAVVD 370 Query: 359 HSGHAETRVFRDVAEVGRTLAELQDVVGTTTPVQTAIIYDWDNRWAIKDAQGIRNSGLKY 418 H GH +TRV R+V+E+GR L + V+G+ AII+DW++RWA+ DA+G RN GL+Y Sbjct: 371 HVGHIDTRVGREVSELGRILEAMSPVMGSKVDADVAIIFDWESRWAMDDAEGPRNCGLEY 430 Query: 419 EETVLQHYQALWELGIPVDIIGSEEDFSAYKLVIAPMLYLISEDNGKRIEKYVEQGGTFL 478 E+TV +HY+ WE GI VDII ++ D S YKLVIAPMLY++ E +R ++VEQGG F+ Sbjct: 431 EKTVAEHYRPFWERGIAVDIINADCDLSGYKLVIAPMLYMVREGFAERATRFVEQGGQFV 490 Query: 479 GTYWSGVVGETDLCHLGGFPGPLRRTLGIWAEETEGLHSRDLNGLVMDPGNSLKLSGEYD 538 TYWSG+V E+DLCHLGGFPGPLR LGIW+EE + L + N + GN L G Y Sbjct: 491 ATYWSGIVNESDLCHLGGFPGPLRPLLGIWSEEIDCLADGESNQVQGLAGNKAGLQGPYQ 550 Query: 539 AHEIAELIHLEGAEALGHYRSDFYAGRPALTVNKLGAGKAYHLATRVKDLQFYVDLYAAI 598 A + +LIHLEGA A+ YR DFYA R A+TVN +G GKA+++A+R D F D + I Sbjct: 551 AIHLCDLIHLEGATAVARYRDDFYADRAAVTVNFVGEGKAWYVASR-NDAAFQRDFFMNI 609 Query: 599 AGKERISRTLNSELPVGVTAQLRTDGEHDYVFVQNFSGAEQVVTLDGREYTDVESGAAAP 658 A + ++R L+++ P GVTA RTDGE +++ V+N+S + + L Y D+ Sbjct: 610 AEELNLARALDTQFPYGVTAHRRTDGESEFIVVENYSNDSKSLVLPAV-YRDMVDQQPVQ 668 Query: 659 SELKLAVNGLAILKR 673 L LA G +L R Sbjct: 669 GSLTLAPWGSRVLTR 683 >ref|NP_561083.1| beta-galactosidase [Clostridium perfringens] dbj|BAB79873.1| beta-galactosidase [Clostridium perfringens str. 13] Length = 689 Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/680 (52%), Positives = 486/680 (71%), Gaps = 12/680 (1%) Query: 1 MLHGADYNPEQWLKYPEVLREDIRMMKLANCNVMSVGIFSWVSLEPEEGVFTFDWLDSVL 60 MLHGADYNPEQW+ P + ED+R+MKL++ NV++VGIFSW LEPEEG F F+WLD ++ Sbjct: 14 MLHGADYNPEQWIDMPNIWGEDVRLMKLSHTNVVAVGIFSWTMLEPEEGKFNFEWLDEIM 73 Query: 61 NTFAENGIYAFLATPSGARPAWMSEKYPXXXXXXXXXXXXXHGVRHNHCYTSPVYREKTA 120 + +NG Y LATPSGA+P WM+ KYP +G RHNHCYTSP+YREK A Sbjct: 74 DLMHKNGNYVILATPSGAKPIWMAHKYPETLRVAPNRVRNLYGERHNHCYTSPIYREKIA 133 Query: 121 LLNGKLAERYANHPAVIGWHISNEYGGECHCDLCQASFRDWLKVKYNNSLDEMNHAWWAT 180 +++ LAERY +HPA+I WHISNE+ G+C+C LC+ +FRD+L+ KY+N ++++N AWW Sbjct: 134 IIDRLLAERYKDHPALILWHISNEFEGQCYCPLCEQAFRDFLREKYDNDINKLNKAWWTK 193 Query: 181 FWSHTYTSWNQVESPAPHGETQVHGLNLDWRRFVSESMIDFCQHEIDSVREYNPELPVTT 240 FWSHTY S++++E+PAPHGE +HGLNLDW RFV+ +D+ +HE ++E P++PVTT Sbjct: 194 FWSHTYASFDEIEAPAPHGEPALHGLNLDWMRFVTHQTLDYYKHERSILKEITPDIPVTT 253 Query: 241 NMHN----IDGVDYRKLAKILDVVSWDAYPDW--GYTEDNDDARLAAWTAMHHDMYRTFK 294 N H+ G+DY K A LDVVSWD YP W T+D++ +R+ HD+ R Sbjct: 254 NFHDYISLFRGIDYWKFAPYLDVVSWDNYPYWHGERTDDHEGSRIG----FVHDLNRAIL 309 Query: 295 H-KPFLLMESTPSLTNWQSVSKLKRPGMHKLSSLQAVAHGSDSVQYFQWRKSRGSSEKFH 353 + KPF++MES+PS TNWQ V+KL+RPGMH LSSLQAVAHGSD+VQYFQWRKSRGSSEKFH Sbjct: 310 NGKPFMMMESSPSSTNWQPVAKLRRPGMHVLSSLQAVAHGSDTVQYFQWRKSRGSSEKFH 369 Query: 354 GAVIDHSGHAETRVFRDVAEVGRTLAELQDVVGTTTPVQTAIIYDWDNRWAIKDAQGIRN 413 GAV+DH GH TRVFRDV +VG L++L DV+GT+ Q A+IYDW+N WAI DAQG R Sbjct: 370 GAVVDHCGHENTRVFRDVTKVGEILSKLDDVIGTSVEPQVAVIYDWENYWAINDAQGPRI 429 Query: 414 SGLKYEETVLQHYQALWELGIPVDIIGSEEDFSAYKLVIAPMLYLISEDNGKRIEKYVEQ 473 Y ET +HY+A W++ IP D+I + DFS YK+V+APMLY++ G+R+E++V+ Sbjct: 430 EQKDYFETCQKHYKAFWDMSIPTDVINMDCDFSKYKVVVAPMLYMVRPGVGERLEEFVKN 489 Query: 474 GGTFLGTYWSGVVGETDLCHLGGFPGPLRRTLGIWAEETEGLHSRDLNGLVMDPGNSLKL 533 GGT + TYWSG+V E DLC LGGFPGPL++ GIWAEE + L+ D+N + ++ GNSL + Sbjct: 490 GGTLVTTYWSGIVDENDLCFLGGFPGPLKKVTGIWAEELDALYDEDVNYVSIEEGNSLGM 549 Query: 534 SGEYDAHEIAELIHLEGAEALGHYRSDFYAGRPALTVNKLGAGKAYHLATRVKDLQFYVD 593 GEY+A +LIH EGAE L Y++DFY G PALT N G G+AY++A R D +F D Sbjct: 550 KGEYEARIFCDLIHSEGAEVLATYKTDFYKGMPALTCNNFGEGQAYYIAFRNND-EFLSD 608 Query: 594 LYAAIAGKERISRTLNSELPVGVTAQLRTDGEHDYVFVQNFSGAEQVVTLDGREYTDVES 653 Y+++A K + R + +LP G+ AQ+R D ++++VF NFS E+ + + + TD+ + Sbjct: 609 FYSSLAKKLTLKRAIEIDLPKGINAQVRMDEKNEFVFFMNFSSEEKTIDIKDLDLTDMVT 668 Query: 654 GAAAPSELKLAVNGLAILKR 673 G E+++ G+ I++R Sbjct: 669 GEKVTKEMEIEPYGVRIVRR 688 >dbj|BAA08485.1| beta-galactosidase [Clostridium perfringens] Length = 676 Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/680 (52%), Positives = 486/680 (71%), Gaps = 12/680 (1%) Query: 1 MLHGADYNPEQWLKYPEVLREDIRMMKLANCNVMSVGIFSWVSLEPEEGVFTFDWLDSVL 60 MLHGADYNPEQW+ P + ED+R+MKL++ NV++VGIFSW LEPEEG F F+WLD ++ Sbjct: 1 MLHGADYNPEQWIDMPNIWGEDVRLMKLSHTNVVAVGIFSWTMLEPEEGKFNFEWLDEIM 60 Query: 61 NTFAENGIYAFLATPSGARPAWMSEKYPXXXXXXXXXXXXXHGVRHNHCYTSPVYREKTA 120 + +NG Y LATPSGA+P WM+ KYP +G RHNHCYTSP+YREK A Sbjct: 61 DLMHKNGNYVILATPSGAKPIWMAHKYPETLRVAQNRVRNLYGERHNHCYTSPIYREKIA 120 Query: 121 LLNGKLAERYANHPAVIGWHISNEYGGECHCDLCQASFRDWLKVKYNNSLDEMNHAWWAT 180 +++ LAERY +HPA+I WHISNE+ G+C+C LC+ +FRD+L+ KY+N ++++N AWW Sbjct: 121 IIDRLLAERYKDHPALILWHISNEFEGQCYCPLCEEAFRDFLREKYDNDINKLNKAWWTK 180 Query: 181 FWSHTYTSWNQVESPAPHGETQVHGLNLDWRRFVSESMIDFCQHEIDSVREYNPELPVTT 240 FWSHTY S++++E+PAPHGE +HGLNLDW RFV+ +D+ +HE ++E P++PVTT Sbjct: 181 FWSHTYASFDEIEAPAPHGEPALHGLNLDWMRFVTHQTLDYYKHERSILKEITPDIPVTT 240 Query: 241 NMHN----IDGVDYRKLAKILDVVSWDAYPDW--GYTEDNDDARLAAWTAMHHDMYRTFK 294 N H+ G+DY K A LDVVSWD YP W T+D++ +R+ HD+ R Sbjct: 241 NFHDYISLFRGIDYWKFAPYLDVVSWDNYPYWHGERTDDHEGSRIG----FVHDLNRAIL 296 Query: 295 H-KPFLLMESTPSLTNWQSVSKLKRPGMHKLSSLQAVAHGSDSVQYFQWRKSRGSSEKFH 353 + KPF++MES+PS TNWQ V+KL+RPGMH LSSLQAVAHGSD+VQYFQWRKSRGSSEKFH Sbjct: 297 NGKPFMMMESSPSSTNWQPVAKLRRPGMHVLSSLQAVAHGSDTVQYFQWRKSRGSSEKFH 356 Query: 354 GAVIDHSGHAETRVFRDVAEVGRTLAELQDVVGTTTPVQTAIIYDWDNRWAIKDAQGIRN 413 GAV+DH GH TRVFRDV +VG L++L DV+GT+ Q A+IYDW+N WAI DAQG R Sbjct: 357 GAVVDHCGHENTRVFRDVTKVGEILSKLDDVIGTSVEPQVAVIYDWENYWAINDAQGPRI 416 Query: 414 SGLKYEETVLQHYQALWELGIPVDIIGSEEDFSAYKLVIAPMLYLISEDNGKRIEKYVEQ 473 Y ET +HY+A W++ IP D+I + DFS YK+V+APMLY++ G+R+E++V+ Sbjct: 417 EQKDYFETCQKHYKAFWDMSIPTDVINMDCDFSKYKVVVAPMLYMVRPGVGERLEEFVKN 476 Query: 474 GGTFLGTYWSGVVGETDLCHLGGFPGPLRRTLGIWAEETEGLHSRDLNGLVMDPGNSLKL 533 GGT + TYWSG+V E DLC LGGFPGPL++ GIWAEE + L+ D+N + ++ GNSL + Sbjct: 477 GGTLVTTYWSGIVDENDLCFLGGFPGPLKKVTGIWAEELDALYDEDVNYVSVEEGNSLGM 536 Query: 534 SGEYDAHEIAELIHLEGAEALGHYRSDFYAGRPALTVNKLGAGKAYHLATRVKDLQFYVD 593 GEY+A +LIH EGAE L Y++DFY G PALT N G G+AY++A R D +F D Sbjct: 537 KGEYEARIFCDLIHSEGAEVLATYKTDFYKGMPALTCNNFGEGQAYYIAFRNND-EFLSD 595 Query: 594 LYAAIAGKERISRTLNSELPVGVTAQLRTDGEHDYVFVQNFSGAEQVVTLDGREYTDVES 653 Y+++A K + R + +LP G+ AQ+R D ++++VF NFS E+ + + + TD+ + Sbjct: 596 FYSSLAKKLTLKRAIEIDLPKGINAQVRMDEKNEFVFFMNFSSEEKTIDIKDLDLTDMVT 655 Query: 654 GAAAPSELKLAVNGLAILKR 673 G E+++ G+ I++R Sbjct: 656 GEKVAKEMEIEPYGVRIVRR 675 >ref|NP_242888.1| beta-galactosidase [Bacillus halodurans] pir||F83902 beta-galactosidase lacA [imported] - Bacillus halodurans (strain C-125) dbj|BAB05741.1| beta-galactosidase [Bacillus halodurans] Length = 689 Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/678 (49%), Positives = 438/678 (64%), Gaps = 17/678 (2%) Query: 1 MLHGADYNPEQWLKYPEVLREDIRMMKLANCNVMSVGIFSWVSLEPEEGVFTFDWLDSVL 60 MLHG DYNP+QWL P++L +D+ +MKL++ N SVGIF+W +LEPEEGV+ F+WLD + Sbjct: 15 MLHGGDYNPDQWLDRPDILADDLHLMKLSHTNTFSVGIFAWSTLEPEEGVYHFEWLDDIF 74 Query: 61 NTFAENGIYAFLATPSGARPAWMSEKYPXXXXXXXXXXXXXHGVRHNHCYTSPVYREKTA 120 + G LATPSGARPAW+S+KYP HG RHNHC+TS VYR+KT Sbjct: 75 ENIHKIGGNIILATPSGARPAWLSQKYPEVLRVDENRVKQLHGGRHNHCFTSEVYRKKTQ 134 Query: 121 LLNGKLAERYANHPAVIGWHISNEYGGECHCDLCQASFRDWLKVKYNNSLDEMNHAWWAT 180 +N LAERY NHPA++ WHISNEY GECHC+ CQ +FRDWLK YNN LD +N AWW + Sbjct: 135 QINRLLAERYGNHPALLMWHISNEYSGECHCEKCQEAFRDWLKSTYNNDLDALNKAWWTS 194 Query: 181 FWSHTYTSWNQVESPAPHGETQVHGLNLDWRRFVSESMIDFCQHEIDSVREYNPELPVTT 240 FWSHTYT W+Q+ESP+P GE VHGLNLDWRRFV++ I F ++EI ++E PE+P+TT Sbjct: 195 FWSHTYTEWSQIESPSPIGEKGVHGLNLDWRRFVTDQTISFFENEIVPLKELTPEIPITT 254 Query: 241 N-------MHNIDGVDYRKLAKILDVVSWDAYPDWGYTEDNDDARLAAWTAMHHDMYRTF 293 N + +DY K AK LDV+SWDAYP W + + A LA +D+YR+ Sbjct: 255 NFMADTSDLIPFQALDYSKFAKHLDVISWDAYPAW-HNDWESTADLAMKVGFINDLYRSL 313 Query: 294 KHKPFLLMESTPSLTNWQSVSKLKRPGMHKLSSLQAVAHGSDSVQYFQWRKSRGSSEKFH 353 K +PFLLMESTPS NW V+K KRPGMH LSS+Q +AHGSDS+ YFQWRKSRGSSEKFH Sbjct: 314 KQQPFLLMESTPSKVNWHDVNKAKRPGMHLLSSMQMIAHGSDSILYFQWRKSRGSSEKFH 373 Query: 354 GAVIDHSGHAETRVFRDVAEVGRTLAELQDVVGTTTPVQTAIIYDWDNRWAIKDAQGIRN 413 GAV+DH RVF+DV EVG TL +L VVGT + AI++DW+N WA+ DAQG Sbjct: 374 GAVVDHDNSPNNRVFQDVTEVGETLEKLAPVVGTNRTSEVAILFDWENHWALGDAQGFGM 433 Query: 414 SGLKYEETVLQHYQALWELGIPVDIIGSEEDFSAYKLVIAPMLYLISEDNGKRIEKYVEQ 473 +Y +T+ QHY+ WE IPVD+I E++FSAY+L+I PMLYL +E+ R++ YV Sbjct: 434 KSKRYPQTLQQHYRTFWERDIPVDVITKEQNFSAYRLLIVPMLYLANEETVARLKSYVAN 493 Query: 474 GGTFLGTYWSGVVGETDLCHLGGFPGPLRRTLGIWAEETEGLHSRDLNGLVMDPGNSLKL 533 GGT + TY SG+V E DL + GG+P + G+ ET+ L+ D N + Sbjct: 494 GGTLVMTYISGIVNEYDLTYTGGWPKDFQDIFGMRPLETDTLYPSDRNYVTYQ------- 546 Query: 534 SGEYDAHEIAELIHLEGAEALGHYRSDFYAGRPALTVNKLGAGKAYHLATRVKDLQFYVD 593 Y + A +I LE A+A G Y+ DFYA PA+T + GKAY++ R+ D +F+ D Sbjct: 547 DKTYPIKDYATIIDLESAQAEGLYKEDFYAKLPAVTSHSYKGGKAYYIGARLDD-EFHRD 605 Query: 594 LYAAIAGKERISRTLNSELPVGVTAQLRTDGEHDYVFVQNFSGAEQVVTLDGREYTDVES 653 Y+ + ++ L GV+ Q R D DYVFV NF+ +Q VT+ E D+ + Sbjct: 606 FYSRLMTDLSLTSVLLVNHGPGVSVQARRDTVTDYVFVMNFTEEKQTVTIQS-EVQDLVT 664 Query: 654 GAAAPSELKLAVNGLAIL 671 P+E L + IL Sbjct: 665 KENVPAEFTLKPYEVKIL 682 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.134 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,070,116,349 Number of extensions: 46268668 Number of successful extensions: 98213 Number of sequences better than 1.0e-05: 74 Number of HSP's gapped: 97845 Number of HSP's successfully gapped: 74 Length of query: 678 Length of database: 757,237,578 Length adjustment: 132 Effective length of query: 546 Effective length of database: 398,844,510 Effective search space: 217769102460 Effective search space used: 217769102460 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)