BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0350.0037.p (753 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_654440.1| PFL, Pyruvate formate lyase [Bacillus anthracis... 1127 0.0 ref|NP_976890.1| formate acetyltransferase [Bacillus cereus ATCC... 1125 0.0 ref|NP_830328.1| Formate acetyltransferase [Bacillus cereus ATCC... 1117 0.0 ref|NP_470779.1| pyruvate formate-lyase [Listeria innocua] >gi|2... 1116 0.0 ref|NP_464931.1| pyruvate formate-lyase [Listeria monocytogenes ... 1114 0.0 >ref|NP_654440.1| PFL, Pyruvate formate lyase [Bacillus anthracis A2012] ref|NP_843045.1| formate acetyltransferase [Bacillus anthracis str. Ames] gb|AAP24531.1| formate acetyltransferase [Bacillus anthracis str. Ames] Length = 749 Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/746 (72%), Positives = 614/746 (82%), Gaps = 1/746 (0%) Query: 8 VQEVKAGWRGFVKGKWSRKVNVNDFIEKNIKPYLGKEDFLAGPTKNTTELWKIISEMTKQ 67 ++ VK W F KW +++V DFI N+ Y G E FLAG T+ T +LW + ++T + Sbjct: 5 LENVKNAWENFKGEKWKAEIDVRDFILNNVNVYEGDESFLAGATEATKQLWDQVMDLTTK 64 Query: 68 EIANGGVLDVDVNTVSTIVSHQPGYIDKDKEQIVGVQTDAPFKRSIQPFGGIKMMIDATK 127 E NGGVLD+D VS+I SH+PGY++K+ E++VG QTD PFKRS+QP+GGI+M A + Sbjct: 65 ERENGGVLDMDTKIVSSITSHEPGYLNKETEKVVGFQTDKPFKRSLQPYGGIRMAEQACE 124 Query: 128 AYGFELPQGIVDMFTNIRKTHNQGVFDAYTSEMRAVRKAGIITGLPDAXXXXXXXXXXXX 187 +YG+E+ + + +F + RKTHNQGVFDAYT EMRA RK+G+ITGLPDA Sbjct: 125 SYGYEMDKELSRIFRDWRKTHNQGVFDAYTPEMRAARKSGVITGLPDAYGRGRIIGDYRR 184 Query: 188 VALYGVDFLIQEKKQDLANLEVDSMTDSVIRLREELSEQIRALGELKQMAQMHGMDISKP 247 VALYGVD LI+ KK DL NL M++ +RLREELSEQIRAL ELKQMA HG DISKP Sbjct: 185 VALYGVDHLIEAKKADL-NLTGGVMSEDTMRLREELSEQIRALQELKQMAASHGFDISKP 243 Query: 248 ANNAKEAFQWVYFGYLAAIKEQNGAAMSLGRVSSFLDIYVERDLAEGTLTEEQAQELADH 307 A NA+EAFQW+YF YLAAIKEQNGAAMSLGR S+FLDIY+ERDLA GTLTEE QE+ DH Sbjct: 244 ATNAQEAFQWLYFAYLAAIKEQNGAAMSLGRTSTFLDIYIERDLANGTLTEEDVQEIVDH 303 Query: 308 FIMKLRIVKFLRTPDYNELFSGDPTWVTESIGGMSVDGTTRVTKNSFRFLHTLYNLGPAP 367 FIMKLR+VKF RTPDYNELFSGDPTWVTESIGGM++DG VTKNSFRFLHTL NLGPAP Sbjct: 304 FIMKLRLVKFARTPDYNELFSGDPTWVTESIGGMALDGRPLVTKNSFRFLHTLDNLGPAP 363 Query: 368 EPNLTVLWSEKLPEGFKKYCAKVSIETSSIQYENDDLMRPIYGDDYGIACCVSAMRIGKQ 427 EPNLTVLWS++LP+ FK YCAK+SI+TS+IQYENDD+MR YGDDYGIACCVSAMRIGKQ Sbjct: 364 EPNLTVLWSKQLPQNFKNYCAKMSIKTSAIQYENDDIMRADYGDDYGIACCVSAMRIGKQ 423 Query: 428 MQFFGARANLAKALLYAINGGVDEKSGVQVGPEYPAITSEYLDYDEVMKRFKPMMEWLAK 487 MQFFGARANLAKALLYAINGG DEKS QVGPEY ITSE LDY+EVM +F MEWLA Sbjct: 424 MQFFGARANLAKALLYAINGGKDEKSKAQVGPEYAPITSEVLDYEEVMHKFDMTMEWLAG 483 Query: 488 TYMNTLNVIHYMHDKYSYERIEMALHDRDILRTMACGIAGLSVAADSLSAIKHAKVKVIR 547 Y+NTLNVIHYMHDKYSYERIEMALHD ++LRTMA GIAGLSV ADSLSAIK+AKVK IR Sbjct: 484 LYLNTLNVIHYMHDKYSYERIEMALHDTNVLRTMATGIAGLSVVADSLSAIKYAKVKPIR 543 Query: 548 NEQGIAVDFETEGEFPCYGNNDDAVDSIAVELVESFMTMIRKHHAYRDALPTQSILTITS 607 +E GIAVDFE EG+FP YGNNDD VD IAV LV++FM +RKH YR+++ T SILTITS Sbjct: 544 DENGIAVDFEIEGDFPKYGNNDDRVDEIAVNLVKTFMNKLRKHKTYRNSVHTMSILTITS 603 Query: 608 NVVYGKKTGTTPDGRKKGEPFAPGANPMHGRDKKGALASLSSVAKLPYEDSLDGISNTFS 667 NVVYGKKTG TPDGR+ GEPFAPGANPMHGRD KGALASL SVAKLPYED+ DGISNTFS Sbjct: 604 NVVYGKKTGNTPDGRRTGEPFAPGANPMHGRDTKGALASLLSVAKLPYEDAQDGISNTFS 663 Query: 668 IVPKALGKEEEGRKSNLVSMLDGYFASKGHHLNVNVFAREQLLDAMEHPENYPQLTIRVS 727 I+PKALGKE+E + NLVSMLDGY +GHHLN+NVF RE L+DAMEHPE YPQLTIRVS Sbjct: 664 IIPKALGKEDEVQVRNLVSMLDGYAVKEGHHLNINVFNRETLMDAMEHPEKYPQLTIRVS 723 Query: 728 GYAVNFIKLTREQQMDVINRTFHGAM 753 GYAVNFIKLTREQQ+DVINRT H +M Sbjct: 724 GYAVNFIKLTREQQIDVINRTMHESM 749 >ref|NP_976890.1| formate acetyltransferase [Bacillus cereus ATCC 10987] gb|AAS39498.1| formate acetyltransferase [Bacillus cereus ATCC 10987] Length = 749 Score = 1125 bits (2911), Expect = 0.0, Method: Compositional matrix adjust. Identities = 537/746 (71%), Positives = 614/746 (82%), Gaps = 1/746 (0%) Query: 8 VQEVKAGWRGFVKGKWSRKVNVNDFIEKNIKPYLGKEDFLAGPTKNTTELWKIISEMTKQ 67 ++ VK W F KW +++V DFI N+ Y G E FLAG T+ T +LW + ++T + Sbjct: 5 LENVKNAWENFKGEKWKAEIDVRDFILNNVNVYEGDESFLAGATEATKQLWDQVMDLTTK 64 Query: 68 EIANGGVLDVDVNTVSTIVSHQPGYIDKDKEQIVGVQTDAPFKRSIQPFGGIKMMIDATK 127 E NGGVLD+D VS+I SH+PGY++K+ E++VG QTD PFKRS+QP+GGI+M A + Sbjct: 65 ERENGGVLDMDTKIVSSITSHEPGYLNKETEKVVGFQTDKPFKRSLQPYGGIRMAEQACE 124 Query: 128 AYGFELPQGIVDMFTNIRKTHNQGVFDAYTSEMRAVRKAGIITGLPDAXXXXXXXXXXXX 187 +YG+E+ + + +F + RKTHNQGVFDAYT EMRA RK+G+ITGLPDA Sbjct: 125 SYGYEMDKELSRIFRDWRKTHNQGVFDAYTPEMRAARKSGVITGLPDAYGRGRIIGDYRR 184 Query: 188 VALYGVDFLIQEKKQDLANLEVDSMTDSVIRLREELSEQIRALGELKQMAQMHGMDISKP 247 VALYGVD LI+ KK DL NL M++ ++RLREELSEQIRAL ELKQMA HG DISKP Sbjct: 185 VALYGVDHLIEAKKVDL-NLTGGVMSEDIMRLREELSEQIRALQELKQMAASHGFDISKP 243 Query: 248 ANNAKEAFQWVYFGYLAAIKEQNGAAMSLGRVSSFLDIYVERDLAEGTLTEEQAQELADH 307 A A+EAFQW+YF YLAAIKEQNGAAMSLGR S+FLDIY+ERDLA GTLTEE QE+ DH Sbjct: 244 ATTAQEAFQWLYFAYLAAIKEQNGAAMSLGRTSTFLDIYIERDLANGTLTEEDVQEIVDH 303 Query: 308 FIMKLRIVKFLRTPDYNELFSGDPTWVTESIGGMSVDGTTRVTKNSFRFLHTLYNLGPAP 367 FIMKLR+VKF RTPDYNELFSGDPTWVTESIGGM++DG VTKNSFRFLHTL NLGPAP Sbjct: 304 FIMKLRLVKFARTPDYNELFSGDPTWVTESIGGMALDGRPLVTKNSFRFLHTLDNLGPAP 363 Query: 368 EPNLTVLWSEKLPEGFKKYCAKVSIETSSIQYENDDLMRPIYGDDYGIACCVSAMRIGKQ 427 EPNLTVLWS++LP+ FK YCAK+SI+TS+IQYENDD+MR YGDDYGIACCVSAMRIGKQ Sbjct: 364 EPNLTVLWSKQLPQNFKNYCAKMSIKTSAIQYENDDIMRADYGDDYGIACCVSAMRIGKQ 423 Query: 428 MQFFGARANLAKALLYAINGGVDEKSGVQVGPEYPAITSEYLDYDEVMKRFKPMMEWLAK 487 MQFFGARANLAKALLYAINGG DEKS QVGPEY ITSE LDY+EVM +F MEWLA Sbjct: 424 MQFFGARANLAKALLYAINGGKDEKSKAQVGPEYAPITSEVLDYEEVMHKFDMTMEWLAG 483 Query: 488 TYMNTLNVIHYMHDKYSYERIEMALHDRDILRTMACGIAGLSVAADSLSAIKHAKVKVIR 547 Y+NTLNVIHYMHDKYSYERIEMALHD ++LRTMA GIAGLSV ADSLSAIK+AKVK IR Sbjct: 484 LYLNTLNVIHYMHDKYSYERIEMALHDTNVLRTMATGIAGLSVVADSLSAIKYAKVKPIR 543 Query: 548 NEQGIAVDFETEGEFPCYGNNDDAVDSIAVELVESFMTMIRKHHAYRDALPTQSILTITS 607 +E GIAVDFE EG+FP YGNNDD VD IAV LV++FM +RKH YR+++ T SILTITS Sbjct: 544 DENGIAVDFEIEGDFPKYGNNDDRVDEIAVNLVKTFMNKLRKHKTYRNSVHTMSILTITS 603 Query: 608 NVVYGKKTGTTPDGRKKGEPFAPGANPMHGRDKKGALASLSSVAKLPYEDSLDGISNTFS 667 NVVYGKKTG TPDGR+ GEPFAPGANPMHGRD KGALASL SVAKLPYED+ DGISNTFS Sbjct: 604 NVVYGKKTGNTPDGRRTGEPFAPGANPMHGRDTKGALASLLSVAKLPYEDAQDGISNTFS 663 Query: 668 IVPKALGKEEEGRKSNLVSMLDGYFASKGHHLNVNVFAREQLLDAMEHPENYPQLTIRVS 727 I+PKALGKE+E + NLVSMLDGY +GHHLN+NVF RE L+DAMEHPE YPQLTIRVS Sbjct: 664 IIPKALGKEDEVQVRNLVSMLDGYAVKEGHHLNINVFNRETLMDAMEHPEKYPQLTIRVS 723 Query: 728 GYAVNFIKLTREQQMDVINRTFHGAM 753 GYAVNFIKLTREQQ+DVINRT H +M Sbjct: 724 GYAVNFIKLTREQQIDVINRTMHESM 749 >ref|NP_830328.1| Formate acetyltransferase [Bacillus cereus ATCC 14579] gb|AAP07529.1| Formate acetyltransferase [Bacillus cereus ATCC 14579] Length = 749 Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust. Identities = 533/746 (71%), Positives = 612/746 (82%), Gaps = 1/746 (0%) Query: 8 VQEVKAGWRGFVKGKWSRKVNVNDFIEKNIKPYLGKEDFLAGPTKNTTELWKIISEMTKQ 67 ++ VK W F KW +++V DFI N+ + G E FLA T+ T +LW + ++T + Sbjct: 5 LENVKNAWENFKGEKWKAEIDVRDFILNNVNVFEGDESFLAEATEATKQLWDQVMDLTTK 64 Query: 68 EIANGGVLDVDVNTVSTIVSHQPGYIDKDKEQIVGVQTDAPFKRSIQPFGGIKMMIDATK 127 E NGGVLD+D VS+I SH PGY++KD E++VG QTD PFKRS+QP+GGI+M A + Sbjct: 65 ERENGGVLDMDTKIVSSITSHDPGYLNKDIEKVVGFQTDKPFKRSLQPYGGIRMAEQACE 124 Query: 128 AYGFELPQGIVDMFTNIRKTHNQGVFDAYTSEMRAVRKAGIITGLPDAXXXXXXXXXXXX 187 +YG+E+ + + +F RKTHNQGVFDAYT EMR RK+G+ITGLPDA Sbjct: 125 SYGYEMDKELSRIFREWRKTHNQGVFDAYTPEMRNARKSGVITGLPDAYGRGRIIGDYRR 184 Query: 188 VALYGVDFLIQEKKQDLANLEVDSMTDSVIRLREELSEQIRALGELKQMAQMHGMDISKP 247 VALYG+D LI+ KK DL NL M++ +RLREELSEQ+RAL ELK+MA HG DISKP Sbjct: 185 VALYGIDHLIEAKKADL-NLTGGVMSEDTMRLREELSEQMRALQELKEMAASHGFDISKP 243 Query: 248 ANNAKEAFQWVYFGYLAAIKEQNGAAMSLGRVSSFLDIYVERDLAEGTLTEEQAQELADH 307 A NA+EAFQW+YF YLAAIKEQNGAAMSLGR S+FLDIY+ERDLA GTLTEE+ QE+ DH Sbjct: 244 ATNAQEAFQWLYFAYLAAIKEQNGAAMSLGRTSTFLDIYIERDLANGTLTEEEVQEIVDH 303 Query: 308 FIMKLRIVKFLRTPDYNELFSGDPTWVTESIGGMSVDGTTRVTKNSFRFLHTLYNLGPAP 367 FIMKLR+VKF RTPDYNELFSGDPTWVTESIGGM++DG VTKNSFRFLHTL NLGPAP Sbjct: 304 FIMKLRLVKFARTPDYNELFSGDPTWVTESIGGMALDGRPLVTKNSFRFLHTLDNLGPAP 363 Query: 368 EPNLTVLWSEKLPEGFKKYCAKVSIETSSIQYENDDLMRPIYGDDYGIACCVSAMRIGKQ 427 EPNLTVLWS++LPE FK YCAK+SI+TS+IQYENDD+MRP YGDDYGIACCVSAMRIGKQ Sbjct: 364 EPNLTVLWSKQLPENFKNYCAKMSIKTSAIQYENDDIMRPEYGDDYGIACCVSAMRIGKQ 423 Query: 428 MQFFGARANLAKALLYAINGGVDEKSGVQVGPEYPAITSEYLDYDEVMKRFKPMMEWLAK 487 MQFFGARANLAKALLYAINGG DEKS QVGPEY ITSE L+Y+EVM +F MEWLA Sbjct: 424 MQFFGARANLAKALLYAINGGKDEKSKAQVGPEYAPITSEVLNYEEVMHKFDMTMEWLAG 483 Query: 488 TYMNTLNVIHYMHDKYSYERIEMALHDRDILRTMACGIAGLSVAADSLSAIKHAKVKVIR 547 Y+NTLNVIHYMHDKYSYERIEMALHD ++LRTMA GIAGLSV ADSLSAIK+AKVK IR Sbjct: 484 LYLNTLNVIHYMHDKYSYERIEMALHDTNVLRTMATGIAGLSVVADSLSAIKYAKVKPIR 543 Query: 548 NEQGIAVDFETEGEFPCYGNNDDAVDSIAVELVESFMTMIRKHHAYRDALPTQSILTITS 607 +E GIAVDFE EG+FP YGNNDD VD IAV LV++FM +RKH YR+++ T SILTITS Sbjct: 544 DENGIAVDFEIEGDFPKYGNNDDRVDEIAVNLVKTFMNKLRKHTTYRNSVHTMSILTITS 603 Query: 608 NVVYGKKTGTTPDGRKKGEPFAPGANPMHGRDKKGALASLSSVAKLPYEDSLDGISNTFS 667 NVVYGKKTG TPDGR+ GEPFAPGANPMHGRD KGALASL SVAKLPYED+ DGISNTFS Sbjct: 604 NVVYGKKTGNTPDGRRTGEPFAPGANPMHGRDTKGALASLLSVAKLPYEDAQDGISNTFS 663 Query: 668 IVPKALGKEEEGRKSNLVSMLDGYFASKGHHLNVNVFAREQLLDAMEHPENYPQLTIRVS 727 I+PKALGKE++ + NLVSMLDGY +GHHLN+NVF RE L+DAMEHPE YPQLTIRVS Sbjct: 664 IIPKALGKEDDVQVRNLVSMLDGYAVKEGHHLNINVFNRETLMDAMEHPEKYPQLTIRVS 723 Query: 728 GYAVNFIKLTREQQMDVINRTFHGAM 753 GYAVNFIKLTREQQ+DVINRT H +M Sbjct: 724 GYAVNFIKLTREQQIDVINRTMHESM 749 >ref|NP_470779.1| pyruvate formate-lyase [Listeria innocua] pir||AB1613 pyruvate formate-lyase [imported] - Listeria innocua (strain Clip11262) emb|CAC96674.1| pyruvate formate-lyase [Listeria innocua] Length = 743 Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/739 (70%), Positives = 614/739 (83%) Query: 15 WRGFVKGKWSRKVNVNDFIEKNIKPYLGKEDFLAGPTKNTTELWKIISEMTKQEIANGGV 74 W F G W ++V+V DFI KN + Y G + FL GPT+ TT+LW + ++TKQE NGGV Sbjct: 5 WYEFAGGNWQQEVDVRDFILKNYRLYDGDDTFLVGPTEATTKLWDQVMDLTKQERENGGV 64 Query: 75 LDVDVNTVSTIVSHQPGYIDKDKEQIVGVQTDAPFKRSIQPFGGIKMMIDATKAYGFELP 134 LD+D VSTI SH PGY++KD E++VGVQTD PFKR++QPFGGI+M A ++YGF++ Sbjct: 65 LDMDTKIVSTITSHDPGYLNKDLEKVVGVQTDVPFKRALQPFGGIRMAEVAAESYGFKVD 124 Query: 135 QGIVDMFTNIRKTHNQGVFDAYTSEMRAVRKAGIITGLPDAXXXXXXXXXXXXVALYGVD 194 + I +F+ RKTHNQGVFDAYT+EMRA RK+G+ITGLPDA VALYGVD Sbjct: 125 EEISHIFSEYRKTHNQGVFDAYTAEMRAARKSGVITGLPDAYGRGRIIGDYRRVALYGVD 184 Query: 195 FLIQEKKQDLANLEVDSMTDSVIRLREELSEQIRALGELKQMAQMHGMDISKPANNAKEA 254 FLI++KKQDL N + +M+D VIR REEL+EQIRALGELK + + HG D+ +PA A+EA Sbjct: 185 FLIKQKKQDLNNTGLRTMSDDVIRQREELNEQIRALGELKVLGEKHGFDLGRPAKTAQEA 244 Query: 255 FQWVYFGYLAAIKEQNGAAMSLGRVSSFLDIYVERDLAEGTLTEEQAQELADHFIMKLRI 314 FQW+Y GYLAAIKEQNGAAMSLGR S+FLDIYVERDL G +TEE+AQE+ DHFIMKLR+ Sbjct: 245 FQWLYLGYLAAIKEQNGAAMSLGRTSTFLDIYVERDLRNGLITEEEAQEIVDHFIMKLRL 304 Query: 315 VKFLRTPDYNELFSGDPTWVTESIGGMSVDGTTRVTKNSFRFLHTLYNLGPAPEPNLTVL 374 VKF RTPDYNELFSGDPTWVTESIGG++ +G VTKNSFRFLHTL NLGPAPEPNLTVL Sbjct: 305 VKFARTPDYNELFSGDPTWVTESIGGITEEGVPLVTKNSFRFLHTLDNLGPAPEPNLTVL 364 Query: 375 WSEKLPEGFKKYCAKVSIETSSIQYENDDLMRPIYGDDYGIACCVSAMRIGKQMQFFGAR 434 WS LP GFKK+CAK+SI+TS+IQYENDD+MRP +GDDY IACCVSAMR+GKQMQFFGAR Sbjct: 365 WSTHLPSGFKKFCAKMSIKTSAIQYENDDVMRPKWGDDYAIACCVSAMRVGKQMQFFGAR 424 Query: 435 ANLAKALLYAINGGVDEKSGVQVGPEYPAITSEYLDYDEVMKRFKPMMEWLAKTYMNTLN 494 ANLAK LLYAINGGVDEKS QVGP Y + + LDY EVM+++ MMEW+A+ Y+NTLN Sbjct: 425 ANLAKTLLYAINGGVDEKSKAQVGPAYRPVEGDVLDYKEVMEKYDAMMEWIAELYLNTLN 484 Query: 495 VIHYMHDKYSYERIEMALHDRDILRTMACGIAGLSVAADSLSAIKHAKVKVIRNEQGIAV 554 VIHYMHDKY+YERIEMALHD ++LRTMA GIAGLSVAADSLSAIK+A V+ IR+E GI V Sbjct: 485 VIHYMHDKYAYERIEMALHDTEVLRTMATGIAGLSVAADSLSAIKYATVRPIRDEDGIVV 544 Query: 555 DFETEGEFPCYGNNDDAVDSIAVELVESFMTMIRKHHAYRDALPTQSILTITSNVVYGKK 614 D+E EG++P YGNNDD VD IAVEL+++FMT +RKH YRDA+ T S+LTITSNVVYGKK Sbjct: 545 DYEIEGDYPKYGNNDDRVDEIAVELLKTFMTKVRKHKTYRDAVHTTSVLTITSNVVYGKK 604 Query: 615 TGTTPDGRKKGEPFAPGANPMHGRDKKGALASLSSVAKLPYEDSLDGISNTFSIVPKALG 674 TG TPDGR+ GEPFAPGANPMHGRD KGALASLSSVAKLPYE DGISNTFSIVPKALG Sbjct: 605 TGNTPDGRRAGEPFAPGANPMHGRDTKGALASLSSVAKLPYEYGQDGISNTFSIVPKALG 664 Query: 675 KEEEGRKSNLVSMLDGYFASKGHHLNVNVFAREQLLDAMEHPENYPQLTIRVSGYAVNFI 734 +E+E + +NLV+MLDGY GHHLN+NVF R+ LLDAM+HPE YPQLTIRVSGYAVNFI Sbjct: 665 REDESQINNLVAMLDGYSTKMGHHLNINVFNRDTLLDAMDHPEEYPQLTIRVSGYAVNFI 724 Query: 735 KLTREQQMDVINRTFHGAM 753 KLTREQQ+DVI+RT H +M Sbjct: 725 KLTREQQLDVIHRTMHESM 743 >ref|NP_464931.1| pyruvate formate-lyase [Listeria monocytogenes EGD-e] pir||AF1250 pyruvate formate-lyase [imported] - Listeria monocytogenes (strain EGD-e) emb|CAC99484.1| pyruvate formate-lyase [Listeria monocytogenes] Length = 743 Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 523/739 (70%), Positives = 614/739 (83%) Query: 15 WRGFVKGKWSRKVNVNDFIEKNIKPYLGKEDFLAGPTKNTTELWKIISEMTKQEIANGGV 74 W F G W ++V+V DFI KN + Y G + FL GPT+ TT+LW + ++TK+E NGGV Sbjct: 5 WYEFAGGNWQQEVDVRDFILKNYRLYDGDDTFLVGPTEATTKLWDQVMDLTKKERENGGV 64 Query: 75 LDVDVNTVSTIVSHQPGYIDKDKEQIVGVQTDAPFKRSIQPFGGIKMMIDATKAYGFELP 134 LD+D VSTI SH PGY++KD E++VGVQTD PFKR++QPFGGI+M A ++YGF++ Sbjct: 65 LDMDTKIVSTITSHDPGYLNKDLEKVVGVQTDVPFKRALQPFGGIRMAEVAAESYGFKVD 124 Query: 135 QGIVDMFTNIRKTHNQGVFDAYTSEMRAVRKAGIITGLPDAXXXXXXXXXXXXVALYGVD 194 + I +F+ RKTHNQGVFDAYT+EMRA RK+G+ITGLPDA VALYGVD Sbjct: 125 EEISHIFSEYRKTHNQGVFDAYTAEMRAARKSGVITGLPDAYGRGRIIGDYRRVALYGVD 184 Query: 195 FLIQEKKQDLANLEVDSMTDSVIRLREELSEQIRALGELKQMAQMHGMDISKPANNAKEA 254 FLI++KKQDL N + +M+D VIR REEL+EQIRALGELK + + HG D+ +PA A+EA Sbjct: 185 FLIKQKKQDLNNTGLRTMSDDVIRQREELNEQIRALGELKVLGEKHGFDLGRPAKTAQEA 244 Query: 255 FQWVYFGYLAAIKEQNGAAMSLGRVSSFLDIYVERDLAEGTLTEEQAQELADHFIMKLRI 314 FQW+Y GYLAAIKEQNGAAMSLGR S+FLDIYVERDL G +TEE+AQE+ DHFIMKLR+ Sbjct: 245 FQWLYLGYLAAIKEQNGAAMSLGRTSTFLDIYVERDLRNGLITEEEAQEIVDHFIMKLRL 304 Query: 315 VKFLRTPDYNELFSGDPTWVTESIGGMSVDGTTRVTKNSFRFLHTLYNLGPAPEPNLTVL 374 VKF RTPDYNELFSGDPTWVTESIGG++ +G VTKNSFRFLHTL NLGPAPEPNLTVL Sbjct: 305 VKFARTPDYNELFSGDPTWVTESIGGITEEGVPLVTKNSFRFLHTLDNLGPAPEPNLTVL 364 Query: 375 WSEKLPEGFKKYCAKVSIETSSIQYENDDLMRPIYGDDYGIACCVSAMRIGKQMQFFGAR 434 WS LP GFKK+CAK+SI+TS+IQYENDD+MRP +GDDY IACCVSAMR+GKQMQFFGAR Sbjct: 365 WSTHLPSGFKKFCAKMSIKTSAIQYENDDVMRPKWGDDYAIACCVSAMRVGKQMQFFGAR 424 Query: 435 ANLAKALLYAINGGVDEKSGVQVGPEYPAITSEYLDYDEVMKRFKPMMEWLAKTYMNTLN 494 ANLAK LLYAINGG+DEKS QVGP Y I + LDY EVM+++ MMEW+A+ Y+NTLN Sbjct: 425 ANLAKTLLYAINGGIDEKSKAQVGPAYRPIEGDVLDYKEVMEKYDAMMEWIAELYLNTLN 484 Query: 495 VIHYMHDKYSYERIEMALHDRDILRTMACGIAGLSVAADSLSAIKHAKVKVIRNEQGIAV 554 VIHYMHDKY+YERIEMALHD ++LRTMA GIAGLSVAADSLSAIK+A V+ IR+E GI V Sbjct: 485 VIHYMHDKYAYERIEMALHDTEVLRTMATGIAGLSVAADSLSAIKYATVRPIRDEDGIVV 544 Query: 555 DFETEGEFPCYGNNDDAVDSIAVELVESFMTMIRKHHAYRDALPTQSILTITSNVVYGKK 614 D+E EG++P YGNNDD VD IAVEL+++FMT +RKH YRDA+ T S+LTITSNVVYGKK Sbjct: 545 DYEIEGDYPKYGNNDDRVDEIAVELLKTFMTKVRKHKTYRDAVHTTSVLTITSNVVYGKK 604 Query: 615 TGTTPDGRKKGEPFAPGANPMHGRDKKGALASLSSVAKLPYEDSLDGISNTFSIVPKALG 674 TG TPDGR+ GEPFAPGANPMHGRD KGALASLSSVAKLPYE DGISNTFSIVPKALG Sbjct: 605 TGNTPDGRRAGEPFAPGANPMHGRDTKGALASLSSVAKLPYEYGQDGISNTFSIVPKALG 664 Query: 675 KEEEGRKSNLVSMLDGYFASKGHHLNVNVFAREQLLDAMEHPENYPQLTIRVSGYAVNFI 734 +E+E + +NLV+MLDGY GHHLN+NVF R+ LLDAM+HPE YPQLTIRVSGYAVNFI Sbjct: 665 REDESQINNLVAMLDGYSTKMGHHLNINVFNRDTLLDAMDHPEEYPQLTIRVSGYAVNFI 724 Query: 735 KLTREQQMDVINRTFHGAM 753 KLTREQQ+DVI+RT H +M Sbjct: 725 KLTREQQLDVIHRTMHESM 743 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.134 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,082,518,515 Number of extensions: 44740024 Number of successful extensions: 115839 Number of sequences better than 1.0e-05: 173 Number of HSP's gapped: 115455 Number of HSP's successfully gapped: 176 Length of query: 753 Length of database: 757,237,578 Length adjustment: 133 Effective length of query: 620 Effective length of database: 396,129,411 Effective search space: 245600234820 Effective search space used: 245600234820 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)