BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0350.0018.p (794 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_388212.1| assimilatory nitrite reductase (subunit) [Bacil... 921 0.0 ref|NP_241479.1| assimilatory nitrite reductase (subunit) [Bacil... 827 0.0 ref|NP_656002.1| pyr_redox, Pyridine nucleotide-disulphide oxido... 770 0.0 ref|NP_844544.1| nitrite reductase [NAD(P)H], large subunit [Bac... 770 0.0 ref|NP_831902.1| Nitrite reductase [NAD(P)H] large subunit [Baci... 769 0.0 >ref|NP_388212.1| assimilatory nitrite reductase (subunit) [Bacillus subtilis] sp|P42435|NASD_BACSU Nitrite reductase [NAD(P)H] pir||I40029 nitrite reductase [NAD(P)H] (EC 1.7.1.4) nasD - Bacillus subtilis dbj|BAA06354.1| subunit of nitrite reductase [Bacillus subtilis] dbj|BAA08964.1| subunit of nitrite reductase [Bacillus subtilis] emb|CAB12124.1| assimilatory nitrite reductase (subunit) [Bacillus subtilis subsp. subtilis str. 168] Length = 805 Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/793 (56%), Positives = 563/793 (70%), Gaps = 7/793 (0%) Query: 1 MAGVGTVEQILKLG-GAYDITVFGSEPHPNYNRIMLSYVLEGSKTIEEIVLNDRQWYADH 59 MAGV +E+IL + + IT+FG+EPHPNYNRI+LS VL+G I++I LND WY ++ Sbjct: 13 MAGVRAIEEILSVAKDEFQITIFGAEPHPNYNRILLSKVLQGDTDIKDITLNDWDWYEEN 72 Query: 60 NITLHTGTTVVRIDEAARQIITDNGMSVPFDKAIIATGSNSFILPVPGSDKEGVVGFRXX 119 NI L+T TV+++D + +ITD P+D+ I+ATGS FILP+PG+DK+GV FR Sbjct: 73 NIQLYTNETVIKVDTENKTVITDADRIQPYDELILATGSVPFILPIPGADKKGVTAFRDI 132 Query: 120 XXXXXXXXXXKTYRTXXXXXXXXXXXXXXXXXVNLGMDVTVVHLLEDLMERQLDHNASAM 179 K Y+ +NLGMDV+V+HL LMERQLD A + Sbjct: 133 KDTDTMLAASKQYKKAAVIGGGLLGLEAARGLLNLGMDVSVIHLAPFLMERQLDATAGRL 192 Query: 180 LQAELARQGVKFAMGKQTVELTGDERVNGLRFSDGTELAADFVVMAVGIKPNTQLARESG 239 LQ EL +QG+ F + KQT E+ GD+RV GLRF DGT + AD VVMAVGI+PNT L ESG Sbjct: 193 LQNELEKQGMTFLLEKQTEEIVGDDRVEGLRFKDGTSIEADLVVMAVGIRPNTTLGAESG 252 Query: 240 ITVNRGIVVDDYLQTSIPGVYSVGECTEHRGTCYGLVAPLFEQGSVLAKHLCGVPTQPYE 299 I VNRGI+V+DY+QT IP +Y+VGEC EHRG YGLVAPL+EQ VLAKH+CG+ T+PYE Sbjct: 253 IPVNRGIIVNDYMQTEIPHIYAVGECAEHRGIAYGLVAPLYEQAKVLAKHMCGIETKPYE 312 Query: 300 GSVVATKLKISGVDVFSAGEFTETAEHTVISAKDEWKRTYKKILLKNNIIVGAVLFGDVT 359 GSV++T+LK+SGV+VFSAG+F E+ E I DE YKKI+L+ N IVGAVLFGD + Sbjct: 313 GSVLSTQLKVSGVEVFSAGDFNESEEKKAIKVFDEQDGIYKKIVLRGNQIVGAVLFGDSS 372 Query: 360 ESANLQKLVKQGAEMTDEIYSEVMXXXXXXXXXXXXXLSVETMADEEIVCGCNGVTKKAI 419 E L ++++ A++++ ++ M+D+EI+CGCNGV+K AI Sbjct: 373 EGNRLFSMIQKEADISETSKISILQPLSQEAGTSITA----AMSDDEIICGCNGVSKGAI 428 Query: 420 VDAVTENGFTTVDEIKACTGATRSCGGCKPVVEQILQFVLGDSFQQGA-KQGICGCTTLS 478 + A+ E G ++ DEIKACTGA+RSCGGCKP+VE+ILQ LG F A K+ ICGCTTLS Sbjct: 429 IQAIQEKGCSSTDEIKACTGASRSCGGCKPLVEEILQHTLGSDFDASAQKEAICGCTTLS 488 Query: 479 RDEIVAEITAKGLKTTKEVMNVLGWKQAEGCSKCRPAVNYYLGMLYPDTHEDEKESRFVN 538 RDE+V EI AKGL T+EVMNVLGWK EGCSKCRPA+NYYLGM+ P +ED++ SRFVN Sbjct: 489 RDEVVEEIKAKGLSHTREVMNVLGWKTPEGCSKCRPALNYYLGMINPTKYEDDRTSRFVN 548 Query: 539 ERMSANIQKDGTFTVVPRMYGGVTTPEDLKRIADVSLKYDVKVVKVTGGQRLDLIGVKKE 598 ERM ANIQKDGT++VVPRMYGGVT DL++IADV KY++ +VK+TGGQR+DLIGVKKE Sbjct: 549 ERMHANIQKDGTYSVVPRMYGGVTNSTDLRKIADVVDKYEIPLVKMTGGQRIDLIGVKKE 608 Query: 599 DVPKVWEELDMPSGYAYAKSLRTVKTCVGSQFCRFGTQDSMGMGALLERKYERLDFPAKF 658 D+PKVWE+LDMPSGYAY K+LRTVKTCVG QFCRFGTQDSM +G LE+K+E L+ P K Sbjct: 609 DLPKVWEDLDMPSGYAYGKTLRTVKTCVGEQFCRFGTQDSMALGIALEKKFEGLNTPHKV 668 Query: 659 KMAVNGCPRNCAESCTKDIGIVGNDXXXXXXXXXXXXXKPRIADSFCKVKTDEELIEVCS 718 KMAV+ CPRNCAES KD+G+VG D R D KVKT+EE++E Sbjct: 669 KMAVSACPRNCAESGIKDLGVVGIDGGWELYVGGNGGTHLRAGDLLMKVKTNEEVLEYAG 728 Query: 719 AVMQYYRETGNYLERTSEWVERIGLEQIQRVILDNEDNRKELAARIDFALAQVSDPWKKM 778 A +QYYRET NYLERTS W+ER+GL +Q V+ D E R+EL R++ L+ DPWK Sbjct: 729 AYLQYYRETANYLERTSAWLERVGLSHVQSVLNDPE-KRQELNGRMNETLSVHKDPWKDF 787 Query: 779 LDDQETRTALFEQ 791 L+D++T LFE Sbjct: 788 LEDKQTSKELFEN 800 >ref|NP_241479.1| assimilatory nitrite reductase (subunit) [Bacillus halodurans] pir||E83726 assimilatory nitrite reductase (subunit) nasD [imported] - Bacillus halodurans (strain C-125) dbj|BAB04332.1| assimilatory nitrite reductase (subunit) [Bacillus halodurans] Length = 807 Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/793 (50%), Positives = 540/793 (68%), Gaps = 7/793 (0%) Query: 1 MAGVGTVEQILKLGGA--YDITVFGSEPHPNYNRIMLSYVLEGSKTIEEIVLNDRQWYAD 58 MAG+ TVE++ + GG Y++TV G EPH NYNRI+LS VL +E+I LN WY + Sbjct: 12 MAGIRTVEELFERGGHERYEVTVVGEEPHVNYNRILLSSVLASEANMEDIELNSLDWYRE 71 Query: 59 HNITLHTGTTVVRIDEAARQIITDNGMSVPFDKAIIATGSNSFILPVPGSDKEGVVGFRX 118 +++TL+ V ++D + ++TD G + +DK I+ATGS+ F+LP+PGSD EGV+ FR Sbjct: 72 NDVTLYRSEKVTKLDRKKKVVLTDKGQKIAYDKVILATGSHPFMLPLPGSDLEGVIAFRN 131 Query: 119 XXXXXXXXXXXKTYRTXXXXXXXXXXXXXXXXXVNLGMDVTVVHLLEDLMERQLDHNASA 178 K Y+ +NLGM+V VVH+ + LMERQLD A+ Sbjct: 132 IEDCETMIETAKNYKKAVVIGGGLLGIEAARGLLNLGMEVEVVHIFDYLMERQLDRTAAN 191 Query: 179 MLQAELARQGVKFAMGKQTVELTGDERVNGLRFSDGTELAADFVVMAVGIKPNTQLARES 238 +L+ EL QG+KF + K T + G RV ++F DGTE AD VVMAVGI+PN ++A S Sbjct: 192 ILRTELENQGMKFLLEKHTEAIIGKGRVERVKFKDGTETRADLVVMAVGIRPNHEVASAS 251 Query: 239 GITVNRGIVVDDYLQTSIPGVYSVGECTEHRGTCYGLVAPLFEQGSVLAKHLCGVPTQPY 298 GI VNRGIVVDDY+QTS P VY+VGEC EHRG YGLVAPL+EQG +LA L + Y Sbjct: 252 GIEVNRGIVVDDYMQTSDPDVYAVGECAEHRGMVYGLVAPLWEQGKILANALMDNKDEKY 311 Query: 299 EGSVVATKLKISGVDVFSAGEFTETAEHTVISAKDEWKRTYKKILLKNNIIVGAVLFGDV 358 EGSV+ +KLK+SGV VFS GEF E + +S DE+ YKKI+ + + IVG++L GD Sbjct: 312 EGSVLYSKLKVSGVQVFSVGEFQEQDDAKSVSMLDEFAGIYKKIVTRGDKIVGSILVGDT 371 Query: 359 TESANLQKLVKQGAEMTDEIYSEVMXXXXXXXXXXXXXLSVETMADEEIVCGCNGVTKKA 418 +ES L + +G S + +V +++E+ VCGCNGV+K A Sbjct: 372 SESTILLNQIIKGVPFEG---SPMQLLRSHVGSADDGVSAVSMLSNEDQVCGCNGVSKGA 428 Query: 419 IVDAVTENGFTTVDEIKACTGATRSCGGCKPVVEQILQFVLGDSFQQGAKQGICGCTTLS 478 I+DA+ G +V ++ ACT A RSCG CKP++ +L LG++ + K+ +CGCT LS Sbjct: 429 IIDAIKTQGCASVADVGACTTAGRSCGTCKPMIADLLAEELGETANE--KETMCGCTDLS 486 Query: 479 RDEIVAEITAKGLKTTKEVMNVLGWKQAEGCSKCRPAVNYYLGMLYPDTHEDEKESRFVN 538 +E+VA I KGL T+EVMNVLGWK+ GCSKCRPA+NYYL M++P HEDE+ESRFVN Sbjct: 487 HEEVVAAIREKGLTHTREVMNVLGWKEEHGCSKCRPAINYYLAMVHPLEHEDERESRFVN 546 Query: 539 ERMSANIQKDGTFTVVPRMYGGVTTPEDLKRIADVSLKYDVKVVKVTGGQRLDLIGVKKE 598 ER+ ANIQKDGT++VVPRMYGGVT P++L+RIADV+ K++V ++K+TGGQR+DL+GVKKE Sbjct: 547 ERLHANIQKDGTYSVVPRMYGGVTNPDELRRIADVAEKFNVPLLKITGGQRIDLLGVKKE 606 Query: 599 DVPKVWEELDMPSGYAYAKSLRTVKTCVGSQFCRFGTQDSMGMGALLERKYERLDFPAKF 658 DVP VW+ELDMPSGYAY K+LRTVKTCVG FCRFGTQDS+G+G +E+K+ERL+ P K Sbjct: 607 DVPSVWKELDMPSGYAYGKALRTVKTCVGEDFCRFGTQDSIGLGIAIEKKFERLNTPHKV 666 Query: 659 KMAVNGCPRNCAESCTKDIGIVGNDXXXXXXXXXXXXXKPRIADSFCKVKTDEELIEVCS 718 KMAV+ CPRNCAES KD+GIVG + R+ D C+VKT EE++E+ Sbjct: 667 KMAVSACPRNCAESGIKDVGIVGVEGAWEIYVGGNGGASLRLGDLMCRVKTSEEVLEIIG 726 Query: 719 AVMQYYRETGNYLERTSEWVERIGLEQIQRVILDNEDNRKELAARIDFALAQVSDPWKKM 778 A +Q YRE YLERTS WVER+GL+ I+ +L++ +NRK L R+D AL+ ++DPW+++ Sbjct: 727 AFLQLYREEARYLERTSHWVERVGLDYIKETLLEHPENRKVLNERMDEALSVLTDPWEEI 786 Query: 779 LDDQETRTALFEQ 791 +D + LFE+ Sbjct: 787 NNDPSLKETLFEE 799 >ref|NP_656002.1| pyr_redox, Pyridine nucleotide-disulphide oxidoreductase [Bacillus anthracis A2012] Length = 801 Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/792 (47%), Positives = 529/792 (66%), Gaps = 9/792 (1%) Query: 1 MAGVGTVEQILKLG-GAYDITVFGSEPHPNYNRIMLSYVLEGSKTIEEIVLNDRQWYADH 59 MAG+ +E+ILK +Y+IT+FG EPHPNYNRIMLS+VL+G I++I++N+ WY ++ Sbjct: 12 MAGIRCMEEILKHDCDSYEITIFGDEPHPNYNRIMLSHVLQGKTNIQDIIMNEYSWYEEN 71 Query: 60 NITLHTGTTVVRIDEAARQIITDNGMSVPFDKAIIATGSNSFILPVPGSDKEGVVGFRXX 119 ITL+T V ID + I+T+ ++ +DK IIATGS++FILPV GS GV GFR Sbjct: 72 EITLYTNERVQSIDREEKVIMTEKNRTLTYDKLIIATGSSAFILPVEGSTLPGVTGFRTI 131 Query: 120 XXXXXXXXXXKTYRTXXXXXXXXXXXXXXXXXVNLGMDVTVVHLLEDLMERQLDHNASAM 179 K + ++LGMDV VVHL+ LME+QLD A+++ Sbjct: 132 EDTQFMMDTAKEKKKAVVIGGGLLGLEAARGLIDLGMDVHVVHLMPSLMEQQLDTKAASL 191 Query: 180 LQAELARQGVKFAMGKQTVELTGDERVNGLRFSDGTELAADFVVMAVGIKPNTQLARESG 239 L+ +L QG+KF M K+TV++ G V G++F DG + D +VMAVGI+PNTQ+AR++G Sbjct: 192 LREDLEAQGMKFLMEKKTVKILGTNHVEGIQFEDGEVVDCDLIVMAVGIRPNTQIARDAG 251 Query: 240 ITVNRGIVVDDYLQTSIPGVYSVGECTEHRGTCYGLVAPLFEQGSVLAKHLCGVPTQPYE 299 + VNRGIVV+DY+ T+ +Y+VGEC EH G YGLVAPL+EQG++LAKH+ + T Y Sbjct: 252 LIVNRGIVVNDYMLTNDESIYAVGECAEHDGIAYGLVAPLYEQGAILAKHISNLQTDGYS 311 Query: 300 GSVVATKLKISGVDVFSAGEFTETAEHTVISAKDEWKRTYKKILLKNNIIVGAVLFGDVT 359 GS+V T+LK++G D+FSAG+ E + IS +E KR+YKK+L+++N +VG VL+GD Sbjct: 312 GSIVGTQLKVAGCDLFSAGQIYEDDQTKAISIFNECKRSYKKVLIRDNKVVGIVLYGDTA 371 Query: 360 ESANLQKLVKQGAEMTDEIYSEVMXXXXXXXXXXXXXLSVETMADEEIVCGCNGVTKKAI 419 + L ++K+ ++ + + ++ L V TM+ ++ +CGCNGVTK I Sbjct: 372 DGTRLFSMLKKEEDIXEYTPASILHKAGEESE-----LDVATMSADDTICGCNGVTKGTI 426 Query: 420 VDAVTENGFTTVDEIKACTGATRSCGGCKPVVEQILQFVLGDSFQQGAKQ-GICGCTTLS 478 V A+ E TT +E+K CT A SCG C+P+VEQ+L LGD+F A+ G+CGCT LS Sbjct: 427 VHAILEQELTTFEEVKGCTKAAGSCGKCRPLVEQVLSHTLGDAFDASAQSAGMCGCTPLS 486 Query: 479 RDEIVAEITAKGLKTTKEVMNVLGWKQAEGCSKCRPAVNYYLGMLYPDTHEDEKESRFVN 538 RDE+VA I KGLK+ KEV NVLG+ +GCSKCRPA+NYYL M P+ +ED+K SRFVN Sbjct: 487 RDEVVAAIHEKGLKSPKEVRNVLGFVHEDGCSKCRPALNYYLRMAIPEEYEDDKASRFVN 546 Query: 539 ERMSANIQKDGTFTVVPRMYGGVTTPEDLKRIADVSLKYDVKVVKVTGGQRLDLIGVKKE 598 ERM+ NIQ DGTF+V+PRMYGGVTT +DL +IA+V+ KYDV +VK+TG R+ L GVKK+ Sbjct: 547 ERMNGNIQHDGTFSVIPRMYGGVTTADDLMKIAEVAKKYDVPLVKITGASRIGLYGVKKQ 606 Query: 599 DVPKVWEELDMPSGYAYAKSLRTVKTCVGSQFCRFGTQDSMGMGALLERKYERLDFPAKF 658 D+P VW +L+M SGYAY+KSLR VK+CVGS+FCRFGT+DS+G+G LLE+ E +D P K Sbjct: 607 DLPNVWADLNMTSGYAYSKSLRNVKSCVGSRFCRFGTKDSLGLGMLLEQSLEMVDTPHKM 666 Query: 659 KMAVNGCPRNCAESCTKDIGIVGNDXXXXXXXXXXXXXKPRIADSFCKVKTDEELIEVCS 718 KM V GCPRNCAE TKD G+V + + R AD V T+++++ + + Sbjct: 667 KMGVTGCPRNCAEVLTKDFGVVCVENGYQLYIGGNGGTEVREADFVMIVPTEDDVLHIAT 726 Query: 719 AVMQYYRETGNYLERTSEWVERIGLEQIQRVILDNEDNRKELAARIDFALAQVSDPWKKM 778 A MQYYRETG Y ERT+ W ER+ + I+ IL + + +L R A + W + Sbjct: 727 AYMQYYRETGIYGERTAYWTERLDFDHIKE-ILQDANMVTKLNERFQTARGTYKEAWGQA 785 Query: 779 LDDQETRTALFE 790 L+ + + A++E Sbjct: 786 LETKSLK-AMYE 796 >ref|NP_844544.1| nitrite reductase [NAD(P)H], large subunit [Bacillus anthracis str. Ames] gb|AAP26030.1| nitrite reductase [NAD(P)H], large subunit [Bacillus anthracis str. Ames] Length = 801 Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/792 (48%), Positives = 526/792 (66%), Gaps = 9/792 (1%) Query: 1 MAGVGTVEQILKLG-GAYDITVFGSEPHPNYNRIMLSYVLEGSKTIEEIVLNDRQWYADH 59 MAG+ +E+ILK +Y+IT+FG EPHPNYNRIMLS+VL+G I++I++N+ WY ++ Sbjct: 12 MAGIRCMEEILKHDCDSYEITIFGDEPHPNYNRIMLSHVLQGKTNIQDIIMNEYSWYEEN 71 Query: 60 NITLHTGTTVVRIDEAARQIITDNGMSVPFDKAIIATGSNSFILPVPGSDKEGVVGFRXX 119 ITL+T V ID + I+T+ ++ +DK IIATGS++FILPV GS GV GFR Sbjct: 72 EITLYTNERVQSIDREEKVIMTEKNRTLTYDKLIIATGSSAFILPVEGSTLPGVTGFRTI 131 Query: 120 XXXXXXXXXXKTYRTXXXXXXXXXXXXXXXXXVNLGMDVTVVHLLEDLMERQLDHNASAM 179 K + ++LGMDV VVHL+ LME+QLD A+++ Sbjct: 132 EDTQFMMDTAKEKKKAVVIGGGLLGLEAARGLIDLGMDVHVVHLMPSLMEQQLDTKAASL 191 Query: 180 LQAELARQGVKFAMGKQTVELTGDERVNGLRFSDGTELAADFVVMAVGIKPNTQLARESG 239 L+ +L QG+KF M K+TV++ G V G++F DG + D +VMAVGI+PNTQ+AR++G Sbjct: 192 LREDLEAQGMKFLMEKKTVKILGTNHVEGIQFEDGEVVDCDLIVMAVGIRPNTQIARDAG 251 Query: 240 ITVNRGIVVDDYLQTSIPGVYSVGECTEHRGTCYGLVAPLFEQGSVLAKHLCGVPTQPYE 299 + VNRGIVV+DY+ T+ +Y+VGEC EH G YGLVAPL+EQG++LAKH+ + T Y Sbjct: 252 LIVNRGIVVNDYMLTNDESIYAVGECAEHDGIAYGLVAPLYEQGAILAKHISNLQTDGYS 311 Query: 300 GSVVATKLKISGVDVFSAGEFTETAEHTVISAKDEWKRTYKKILLKNNIIVGAVLFGDVT 359 GS+V T+LK++G D+FSAG+ E + IS +E KR+YKK+L+++N +VG VL+GD Sbjct: 312 GSIVGTQLKVAGCDLFSAGQIYEDDQTKAISIFNECKRSYKKVLIRDNKVVGIVLYGDTA 371 Query: 360 ESANLQKLVKQGAEMTDEIYSEVMXXXXXXXXXXXXXLSVETMADEEIVCGCNGVTKKAI 419 + L ++K+ +E E L V TM+ ++ +CGCNGVTK I Sbjct: 372 DGTRLFSMLKK-----EEDIQEYTPASILHKAGEESELDVATMSADDTICGCNGVTKGTI 426 Query: 420 VDAVTENGFTTVDEIKACTGATRSCGGCKPVVEQILQFVLGDSFQQGAKQ-GICGCTTLS 478 V A+ E TT +E+K CT A SCG C+P+VEQ+L LGD+F A+ G+CGCT LS Sbjct: 427 VHAILEQELTTFEEVKGCTKAAGSCGKCRPLVEQVLSHTLGDAFDASAQSAGMCGCTPLS 486 Query: 479 RDEIVAEITAKGLKTTKEVMNVLGWKQAEGCSKCRPAVNYYLGMLYPDTHEDEKESRFVN 538 RDE+VA I KGLK+ KEV NVLG+ +GCSKCRPA+NYYL M P+ +ED+K SRFVN Sbjct: 487 RDEVVAAIHEKGLKSPKEVRNVLGFVHEDGCSKCRPALNYYLRMAIPEEYEDDKASRFVN 546 Query: 539 ERMSANIQKDGTFTVVPRMYGGVTTPEDLKRIADVSLKYDVKVVKVTGGQRLDLIGVKKE 598 ERM+ NIQ DGTF+V+PRMYGGVTT +DL +IA+V+ KYDV +VK+TG R+ L GVKK+ Sbjct: 547 ERMNGNIQHDGTFSVIPRMYGGVTTADDLMKIAEVAKKYDVPLVKITGASRIGLYGVKKQ 606 Query: 599 DVPKVWEELDMPSGYAYAKSLRTVKTCVGSQFCRFGTQDSMGMGALLERKYERLDFPAKF 658 D+P VW +L+M SGYAY+KSLR VK+CVGS+FCRFGT+DS+G+G LLE+ E +D P K Sbjct: 607 DLPNVWADLNMTSGYAYSKSLRNVKSCVGSRFCRFGTKDSLGLGMLLEQSLEMVDTPHKM 666 Query: 659 KMAVNGCPRNCAESCTKDIGIVGNDXXXXXXXXXXXXXKPRIADSFCKVKTDEELIEVCS 718 KM V GCPRNCAE TKD G+V + + R AD V T+++++ + + Sbjct: 667 KMGVTGCPRNCAEVLTKDFGVVCVENGYQLYIGGNGGTEVREADFVMIVPTEDDVLHIAT 726 Query: 719 AVMQYYRETGNYLERTSEWVERIGLEQIQRVILDNEDNRKELAARIDFALAQVSDPWKKM 778 A MQYYRETG Y ERT+ W ER+ + I+ IL + + +L R A + W + Sbjct: 727 AYMQYYRETGIYGERTAYWTERLDFDHIKE-ILQDANMVTKLNERFQTARGTYKEAWGQA 785 Query: 779 LDDQETRTALFE 790 L+ + + A++E Sbjct: 786 LETKSLK-AMYE 796 >ref|NP_831902.1| Nitrite reductase [NAD(P)H] large subunit [Bacillus cereus ATCC 14579] gb|AAP09103.1| Nitrite reductase [NAD(P)H] large subunit [Bacillus cereus ATCC 14579] Length = 801 Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/792 (47%), Positives = 526/792 (66%), Gaps = 9/792 (1%) Query: 1 MAGVGTVEQILKLGG-AYDITVFGSEPHPNYNRIMLSYVLEGSKTIEEIVLNDRQWYADH 59 MAG+ +E+ILK +Y+IT+FG EPHPNYNRIMLS+VL+G +++I++N+ WY ++ Sbjct: 12 MAGIRCMEEILKHDSDSYEITIFGDEPHPNYNRIMLSHVLQGKTNMQDIIMNEYSWYEEN 71 Query: 60 NITLHTGTTVVRIDEAARQIITDNGMSVPFDKAIIATGSNSFILPVPGSDKEGVVGFRXX 119 ITL+T V I+ + IIT+ ++ +DK IIATGS++FILPV GS GV GFR Sbjct: 72 EITLYTNEKVQSINREEKIIITEKNRTLTYDKLIIATGSSAFILPVEGSTLPGVTGFRTI 131 Query: 120 XXXXXXXXXXKTYRTXXXXXXXXXXXXXXXXXVNLGMDVTVVHLLEDLMERQLDHNASAM 179 + ++LGMDV VVHL+ +LME+QLD A+++ Sbjct: 132 EDTQFMIDTANEKKKAVVIGGGLLGLEAARGLIDLGMDVHVVHLMPNLMEQQLDTKAASL 191 Query: 180 LQAELARQGVKFAMGKQTVELTGDERVNGLRFSDGTELAADFVVMAVGIKPNTQLARESG 239 L+ +L QG+KF M K+TV++ G + V G++F DG + D +VMAVGI+PNTQ+A+++G Sbjct: 192 LREDLEAQGMKFLMEKKTVKILGTDHVEGIQFEDGEVVDCDLIVMAVGIRPNTQIAKDAG 251 Query: 240 ITVNRGIVVDDYLQTSIPGVYSVGECTEHRGTCYGLVAPLFEQGSVLAKHLCGVPTQPYE 299 + VNRGIVV+DY+ T+ +Y+VGEC EH G YGLVAPL+EQG++LAKH+ + T Y Sbjct: 252 LIVNRGIVVNDYMLTNDESIYAVGECAEHDGIAYGLVAPLYEQGAILAKHITNLQTDGYS 311 Query: 300 GSVVATKLKISGVDVFSAGEFTETAEHTVISAKDEWKRTYKKILLKNNIIVGAVLFGDVT 359 GS+V T+LK++G D+FSAG+ E + IS DE KR+YKK+L+++N +VG VL+GD Sbjct: 312 GSIVGTQLKVAGCDLFSAGQIYEDDQTKAISIFDECKRSYKKVLIRDNKVVGIVLYGDTA 371 Query: 360 ESANLQKLVKQGAEMTDEIYSEVMXXXXXXXXXXXXXLSVETMADEEIVCGCNGVTKKAI 419 + L ++K+ +E E V TM+ ++ +CGCNGVTK +I Sbjct: 372 DGTRLFSMLKK-----EEDIQEYTPASLLHKAGEESEFDVATMSADDTICGCNGVTKGSI 426 Query: 420 VDAVTENGFTTVDEIKACTGATRSCGGCKPVVEQILQFVLGDSFQQGAKQ-GICGCTTLS 478 V A+ E TT +E+K CT A SCG C+P+VEQ+L LGD+F A+ G+CGCT LS Sbjct: 427 VHAILEQELTTFEEVKGCTKAAGSCGKCRPLVEQVLSHTLGDAFDASAQSAGMCGCTPLS 486 Query: 479 RDEIVAEITAKGLKTTKEVMNVLGWKQAEGCSKCRPAVNYYLGMLYPDTHEDEKESRFVN 538 RDE+VA I KGLK+ KEV NVLG+ +GCSKCRPA+NYYL M P+ +ED+K SRFVN Sbjct: 487 RDEVVAAIHEKGLKSPKEVRNVLGFAHEDGCSKCRPALNYYLRMAIPEEYEDDKSSRFVN 546 Query: 539 ERMSANIQKDGTFTVVPRMYGGVTTPEDLKRIADVSLKYDVKVVKVTGGQRLDLIGVKKE 598 ERM+ NIQ DGTF+V+PRMYGGVTT +DL +IA+V+ KYDV +VK+TG R+ L GVKK+ Sbjct: 547 ERMNGNIQHDGTFSVIPRMYGGVTTADDLMKIAEVAKKYDVPLVKITGASRIGLYGVKKQ 606 Query: 599 DVPKVWEELDMPSGYAYAKSLRTVKTCVGSQFCRFGTQDSMGMGALLERKYERLDFPAKF 658 D+P VW +L M SGYAY+KSLR VK+CVGS+FCRFGT+DS+G+G LLE+ E +D P K Sbjct: 607 DLPNVWADLHMTSGYAYSKSLRNVKSCVGSRFCRFGTKDSLGLGMLLEQSLEMVDTPHKM 666 Query: 659 KMAVNGCPRNCAESCTKDIGIVGNDXXXXXXXXXXXXXKPRIADSFCKVKTDEELIEVCS 718 KM V GCPRNCAE TKD G+V + + R AD V T+++++ + + Sbjct: 667 KMGVTGCPRNCAEVLTKDFGVVCVENGYQLYIGGNGGTEVREADFVMIVPTEDDVLRIAA 726 Query: 719 AVMQYYRETGNYLERTSEWVERIGLEQIQRVILDNEDNRKELAARIDFALAQVSDPWKKM 778 A MQYYRETG Y ERT+ W ER+G + I+ IL + L R A ++ W + Sbjct: 727 AYMQYYRETGIYGERTAYWTERLGFDHIKE-ILQDASMVTTLNERFQTARRTYTEAWGQA 785 Query: 779 LDDQETRTALFE 790 L+ + + A++E Sbjct: 786 LETKSLK-AMYE 796 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.134 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,065,194,359 Number of extensions: 41912003 Number of successful extensions: 108217 Number of sequences better than 1.0e-05: 642 Number of HSP's gapped: 107641 Number of HSP's successfully gapped: 687 Length of query: 794 Length of database: 757,237,578 Length adjustment: 134 Effective length of query: 660 Effective length of database: 393,414,312 Effective search space: 259653445920 Effective search space used: 259653445920 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)