BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0346.0066.p (1142 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAC50569.1| beta-galactosidase [Thermoanaerobacter mathranii] 863 0.0 ref|ZP_00061173.1| COG3250: Beta-galactosidase/beta-glucuronidas... 555 e-156 dbj|BAB91370.1| beta-galactosidase [Streptococcus pneumoniae] 486 e-136 ref|NP_809374.1| beta-galactosidase [Bacteroides thetaiotaomicro... 468 e-130 dbj|BAC56904.1| beta-galactosidase [Bacteroides fragilis] 453 e-125 >emb|CAC50569.1| beta-galactosidase [Thermoanaerobacter mathranii] Length = 751 Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/718 (58%), Positives = 513/718 (71%), Gaps = 25/718 (3%) Query: 9 PVSLPHDWLIYNTHALYENGEGWYRTVLSLDEVPANQLMSLRFEGVYMNSTLYVNGHVAG 68 P+ +PHDWLIYNT LYEN GWYR + + Q++ L F+GVYM+S++YVN G Sbjct: 29 PIDIPHDWLIYNTLNLYENSIGWYRKKFTCAKEEGKQIL-LCFDGVYMDSSIYVNKQFVG 87 Query: 69 EWKYGYSTFEFDITPYLTVGDNMIYMRVIHEAPNSRWYSGAGIYRPVWLKT-TQKTHIAP 127 EWKYGYS+FE++IT L G+N I ++V+++ PNSRWY+GAGIYR VWLK + HI Sbjct: 88 EWKYGYSSFEYNITDSLVDGENEILVKVVYQNPNSRWYTGAGIYRNVWLKIRDENQHIVT 147 Query: 128 DGIYISARPAGGGCWTVDVDCELRVEEGREPSGLKLRHTILDARGTVIRQEESVVHAEAG 187 +GIY++ + W V++D EL E L HTI G V +SVV +A Sbjct: 148 NGIYVTTKQEDDR-WLVEIDTELVSYEDS-----LLTHTIT-YEGQVFAASKSVV--KAS 198 Query: 188 HQPVHTHSRLTVERPQLWDIASPHLYTLRTELWXXXXXXXXX---------XXXFGFRTV 238 + H + V+ P LW P+LY L TEL+ GFR + Sbjct: 199 NYVTHNVQTIFVKNPLLWSPEEPNLYKLITELYLVKSDKDSKESIEKIEYIAQNIGFRKI 258 Query: 239 ALDSQKGFFLNGRHVKLYGVCQHHDLGCLGAAVNKAALRRQFVLLQEMGVNAIRTAHNMP 298 LD Q+G +NGR +KL GVC+HHDLG LGAA NK AL+R+F +L+EMGVNAIRTAHNMP Sbjct: 259 ILDPQQGLLVNGRKMKLKGVCEHHDLGALGAAFNKTALKRRFKILKEMGVNAIRTAHNMP 318 Query: 299 AVELMELADEMGVLIVSEAFDMWERSKTAYDYARFFPEWWTKDVASWVRRDRNHPSLIMW 358 A E M+LADEMG +VSEAFD+WE KT YDY+RFF W DV SWV RDRNHPSL+MW Sbjct: 319 APEFMDLADEMGFFVVSEAFDVWEIPKTRYDYSRFFKNWAHIDVRSWVMRDRNHPSLLMW 378 Query: 359 SIGNEIYDTHAGARGQELTRMLRDEVLAHDPRVNAFVTIGSNYMPWENAQKCADIVKVAG 418 SIGNEIYDTHA RGQELT+ML D V +DP+ N VTI SNYMPWENAQKCADIVKV G Sbjct: 379 SIGNEIYDTHANERGQELTKMLVDLVRKYDPKENGKVTIASNYMPWENAQKCADIVKVVG 438 Query: 419 YNYGEKYYDRQHEEHPDWIIYGSETCSTVQSRGVYHFPLAQPVLADDDQQCSSLGNSSTS 478 YNYGEKYY R HEEH DW+IYGSET + VQSRG+YHFP + +LADDD+QCS+LGNS TS Sbjct: 439 YNYGEKYYKRHHEEHHDWVIYGSETGAVVQSRGIYHFPREKSILADDDEQCSALGNSPTS 498 Query: 479 WGAPSTEACITSDRDAAYSLGQFLWTGFDYIGEPTPYHTKNSYFGQLDTAGFPKDAYYIY 538 WGA S E+CI ++RD +SLGQF+WTGFDYIGEPTPYHTKNSYFGQ+DTA F KD+YYIY Sbjct: 499 WGAKSAESCILAERDTPFSLGQFIWTGFDYIGEPTPYHTKNSYFGQIDTATFKKDSYYIY 558 Query: 539 QAEWTDYRTRPMIHIFP-YWDFSEGQLIDVRVCSNAPRIELFFNDISQGIYDIDHAHGGK 597 QA WTDY+T+PM+HI P YWDF++GQ+IDV VCSNAP+IEL N I+ G ++ DH HG + Sbjct: 559 QAAWTDYKTKPMVHIIPSYWDFNKGQMIDVGVCSNAPKIELQLNGITIGTHEFDHEHGTQ 618 Query: 598 LLGEXXXXGHLPYTEGVLRAVAYDEQGNVIASAQRSSFGDAASLVLTPDKHVLAADGQDL 657 L+ +PY +G L+A+AYDE G +IA+ R SF DA + L DK L A+G DL Sbjct: 619 LVA----WWKIPYEKGELKAIAYDETGKIIATDVRKSFKDARKIRLHADKESLIANGTDL 674 Query: 658 IFVTVTAADRQGLPVENANNRIHLSVEGPGRLIGLDNGDSTDYDPYKGVSRRLFSGKL 715 IFV +T D G VENANNRIH++V G GRLIGLDNGDSTDYD YKG+SRRLF+G++ Sbjct: 675 IFVEITVEDENGNIVENANNRIHVNVTGAGRLIGLDNGDSTDYDQYKGLSRRLFNGQV 732 >ref|ZP_00061173.1| COG3250: Beta-galactosidase/beta-glucuronidase [Clostridium thermocellum ATCC 27405] Length = 941 Score = 555 bits (1429), Expect = e-156, Method: Compositional matrix adjust. Identities = 288/709 (40%), Positives = 418/709 (58%), Gaps = 27/709 (3%) Query: 49 LRFEGVYMNSTLYVNGHVAGEWKYGYSTFEFDITPYLTVG-DNMIYMRVIHEAPNSRWYS 107 ++F+G YMNS +++NG G YGYS+FE+D+TPYL +G N+I +++ + PNSRWYS Sbjct: 46 IQFDGAYMNSQVWINGTYLGIRPYGYSSFEYDLTPYLNIGGKNVIAVKINNNQPNSRWYS 105 Query: 108 GAGIYRPVWLKTTQKTHIAPDGIYISARPAGGGCWTVDVDCELRVEEGREPSGLKLRHTI 167 G+GIYR VWL H+ G++I+ T +V ++ V +G + L+ I Sbjct: 106 GSGIYRNVWLTVLDPVHVDYCGMFITTPNVSRDSATANVSTKV-VNQGNSEKTVSLKTII 164 Query: 168 LDARGT-VIRQEESVVHAEAGHQPVHTHSRLTVERPQLWDIASPHLYTLRTELWXXXXXX 226 +DA G V S V+ AG + LTV P LW SP+LY ++T++ Sbjct: 165 MDANGNQVASDTSSAVNISAGSDYTFNQN-LTVSNPNLWSPDSPYLYMVQTQVIVDGKVA 223 Query: 227 XXXXXXFGFRTVALDSQKGFFLNGRHVKLYGVCQHHDLGCLGAAVNKAALRRQFVLLQEM 286 GFR + S GF LNG K+ GVC HHDLG LGAAVN A+ RQ +++EM Sbjct: 224 DTYKSTMGFRYLNFSSTTGFSLNGVKTKIKGVCMHHDLGALGAAVNYRAIERQLQIMKEM 283 Query: 287 GVNAIRTAHNMPAVELMELADEMGVLIVSEAFDMWERSKTAYDYARFFPEWWTKDVASWV 346 G NAIRTAHN P +++E+ D +G++++ EAFD WE KTA DY +F +W +D+ V Sbjct: 284 GCNAIRTAHNPPDPQVLEICDRLGLMVMDEAFDCWETGKTANDYHLYFKDWAKRDLQDMV 343 Query: 347 RRDRNHPSLIMWSIGNEIYDTHAGARGQELTRMLRDEVLAHDPRVNAFVTIGSNYMPWEN 406 +RDRNHPS+IMWSIGNEI + E L++ V DP + M + Sbjct: 344 KRDRNHPSVIMWSIGNEIPNATV-----ETATKLKNWVKEIDPTRPVTWGCFAINMSDDT 398 Query: 407 AQKCADIVKVAGYNYGEKYYDRQHEEHPDWIIYGSETCSTVQSRGVYHFPLAQPVLADDD 466 ++ A ++ + GYNY YD+ H+EHP+WI++GSET S V+SRGVY P Q +L +D Sbjct: 399 YKRIASVLDLVGYNYFPFMYDQGHKEHPEWIMFGSETSSAVRSRGVYKTPTNQNILTGND 458 Query: 467 QQCSSLGNSSTSWGAPSTEACITSDRDAAYSLGQFLWTGFDYIGEPTPYH--TKNSYFGQ 524 QCSS NS +WG S E+ Y LG+F+WTGFDYIGEPTPY +K+SYFG Sbjct: 459 NQCSSYDNSVVAWGN-SAESSYYEINRRDYMLGEFVWTGFDYIGEPTPYKWPSKSSYFGI 517 Query: 525 LDTAGFPKDAYYIYQAEWTDYRTRPMIHIFPYWDFSEGQLIDVRVCSNAPRIELFFNDIS 584 +DT GFPKD YY YQ++W+D +PM+HI P+W++S G ++V SN +ELF N S Sbjct: 518 VDTCGFPKDIYYFYQSKWSD---KPMVHILPHWNWSNGTTVEVWAYSNCDTVELFLNGTS 574 Query: 585 QGIYDIDHAHGGKLLGEXXXXG-HLPYTEGVLRAVAYDEQGNVIASAQRSSFGDAASLVL 643 G+ K +G ++P+ G LRA A +GN++ + ++ G+ A + L Sbjct: 575 LGV---------KSMGNNGHVSWNVPWVPGTLRAKAV--KGNIVVYDEVTTAGNPAKIQL 623 Query: 644 TPDKHVLAADGQDLIFVTVTAADRQGLPVENANNRIHLSVEGPGRLIGLDNGDSTDYDPY 703 PD+ + ADG+DL+F+ D G+ V A+N ++ S+ GPG ++G+DNG++ +PY Sbjct: 624 KPDRTTITADGKDLVFIETDIVDSNGVLVPTASNTVNFSISGPGVIVGVDNGNAASLEPY 683 Query: 704 KGVSRRLFSGKLLAVIAGTLEPGTITLRASSPEVASAELILQAAAPAPD 752 K SR+ F+GK L ++ T GTI + ASS + S +I++ P+ Sbjct: 684 KANSRQAFNGKCLVIVQATKTNGTIIVTASSNGLESDRVIIKTTGGEPE 732 >dbj|BAB91370.1| beta-galactosidase [Streptococcus pneumoniae] Length = 2405 Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust. Identities = 284/803 (35%), Positives = 426/803 (53%), Gaps = 77/803 (9%) Query: 6 EWMPVSLPHDWLIY----------NTHALYENGEGWYRTVLSLDEVPANQLMSLRFEGVY 55 +W ++LPHDW IY N G WYR L+E N+ + + F+GVY Sbjct: 225 DWSKLNLPHDWSIYFDFDHKSPARNEGGQLNGGTAWYRKTFILNEADKNKDVRINFDGVY 284 Query: 56 MNSTLYVNGHVAGEWKYGYSTFEFDITPYLTV--GDNMIYMRVIHEAPNSRWYSGAGIYR 113 M+S +YVNG G + GY+ F +DIT +L +N I ++V ++ P+SRWYSG+GIYR Sbjct: 285 MDSKVYVNGKFVGHYPSGYNHFSYDITEFLNKDGSENSITVQVTNKQPSSRWYSGSGIYR 344 Query: 114 PVWLKTTQKTHIAPDGIYISA-RPAGGGCWTVDVDCELRVEE-GREPSGLKLRHTILDAR 171 V L K H+A +G +I+ + A V+ + +++ ++ + + + I Sbjct: 345 DVTLSYRDKVHVAENGNHITTPKLAEQKEGNVETQVQSKIKNTDKKAAKVFVEQQIFTKE 404 Query: 172 GTVIRQEESVVHAE----AGHQPVHTHSRLTVERPQLWDIAS--PHLYTLRTELWXXXXX 225 G V+ + +V +E A ++ + V +P LW S P LY L+T+++ Sbjct: 405 GKVVSE---LVRSETKNLAENEVADFRQTILVNKPTLWTTKSYHPQLYVLKTKVYKEGQL 461 Query: 226 XXXXXXXFGFRTVALDSQKGFFLNGRHVKLYGVCQHHDLGCLGAAVNKAALRRQFVLLQE 285 FG+R ++ GF LNG +K +GV HHD G LGA N A R+ LL++ Sbjct: 462 VDVTEDTFGYRYFNWTAKDGFSLNGERMKFHGVSIHHDNGALGAEENYKATYRKLKLLKD 521 Query: 286 MGVNAIRTAHNMPAVELMELADEMGVLIVSEAFDMWERSKTAYDYARFF------PE--- 336 MGVN+IRT HN + +L++ A +G+L+ EAFD W K YDY RFF PE Sbjct: 522 MGVNSIRTTHNPASPQLLDAAASLGLLVQEEAFDTWYGGKKTYDYGRFFDQDATHPEAKK 581 Query: 337 ---WWTKDVASWVRRDRNHPSLIMWSIGNEIYDTHAGARGQELTRMLRDEVLAHDPRVNA 393 W D+ + V RD+N+PS++MWS+GNE+ + + R E + L+ + A D Sbjct: 582 GEKWSDFDLRTMVERDKNNPSIVMWSLGNEVEEANGSPRSIETAKRLKAVIKAID--TER 639 Query: 394 FVTIGSNYMPWE---NAQKCADIVKVAGYNYGEKYYDRQHEEHPDWIIYGSETCSTVQSR 450 +VT+G N + K A+I+ G NYGE++YD HPDW+IYGSET S ++R Sbjct: 640 YVTMGENKFSRAATGDFLKLAEIMDAVGMNYGERFYDAVRSAHPDWLIYGSETSSATRTR 699 Query: 451 GVYHFPLAQPVLADDDQ-----QCSSLGNSSTSWGAPSTEACITSDRDAAYSLGQFLWTG 505 Y+ P +L D++ + S GN WG +TE+ T DRD A GQF+WTG Sbjct: 700 DSYYNPTQ--ILGHDNRLNRHYEQSDYGNDRVGWGRTATESW-TFDRDRAGYAGQFIWTG 756 Query: 506 FDYIGEPTPYHT------KNSYFGQLDTAGFPKDAYYIYQAEWTDYRTRPMIHIFPYWDF 559 DYIGEPTP+H K+SYFG +DTAG PK+ +Y+Y++EW + +P + I P+W++ Sbjct: 757 IDYIGEPTPWHNQDNTPVKSSYFGIIDTAGLPKNDFYLYRSEWYSAKEKPTVRILPHWNW 816 Query: 560 SEGQLID----------VRVCSNAPRIELFFNDISQGIYDIDHA--------HGGKLLGE 601 +E L D VR SNA +ELF N S G + H G E Sbjct: 817 TEETLKDRKMRVDGKVPVRTFSNAASVELFLNGESLGKKEFTKKTTEDGRPYHEGAKPSE 876 Query: 602 XXXXGHLPYTEGVLRAVAYDEQGNVIASAQRSSFGDAASLVLTPDKHVLAADGQDLIFVT 661 + Y G L A+A DE+GN IA ++ G+ A + LT ++HV+ ADG+DL ++ Sbjct: 877 LYLEWLVKYQPGTLTAIARDEKGNEIARDSVTTAGEPARVRLTKEEHVITADGKDLSYIH 936 Query: 662 VTAADRQGLPVENANNRIHLSVEGPGRLIGLDNGDSTDYDPYKGVS-----RRLFSGKLL 716 D +G V ANN +H ++ G G+++G+DNG+ + YK + RR F+GK + Sbjct: 937 YEIVDSEGNVVPTANNLVHFNLHGQGQIVGVDNGEQASRERYKAQADGTWQRRAFNGKGV 996 Query: 717 AVIAGTLEPGTITLRASSPEVAS 739 ++ T + G TL A S + S Sbjct: 997 VIVKSTEKEGKFTLYADSAGLTS 1019 >ref|NP_809374.1| beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482] gb|AAO75568.1| beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482] Length = 839 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 273/795 (34%), Positives = 410/795 (51%), Gaps = 56/795 (7%) Query: 4 DTEWMPVSLPHDWLIY---------NTHALYENGE------------------GWYRTVL 36 D +W V +PHDW IY A+ ++G+ GWYR Sbjct: 51 DIKWQSVVVPHDWAIYGPFGIDNDRQLTAIAQDGQKEAMEHAGRTGGLPFVGVGWYRLNF 110 Query: 37 SLDEVPANQLMSLRFEGVYMNSTLYVNGHVAGEWKYGYSTFEFDITPYLTVG-DNMIYMR 95 + +L F+G ++ +Y+NG AG W YGY+TF D+TPYL G N + +R Sbjct: 111 DAPSFVKGKKATLIFDGAMSHARVYINGQEAGYWPYGYNTFYLDVTPYLKEGTKNTLAVR 170 Query: 96 VIHEAPNSRWYSGAGIYRPVWLKTTQKTHIAPDGIYISARPAGGGCWTVDVDCELRVEEG 155 + +E +SRWY GAG+YR V L T+ HI G ++ V++ L V G Sbjct: 171 LENETESSRWYPGAGLYRNVHLVVTEDAHIPTWGTQLTTPVVKDDYAKVNIKTTLVVPSG 230 Query: 156 REPSGLKLRHTILDARGTVIRQEESVVHAEAGHQPVHTHSRLTVERPQLWDIASPHLYTL 215 ++ ++ + D G V+ +E + + L V RP LW +P LY Sbjct: 231 KQFDAYRIVTELKDKDGKVVTTDEK--QGSRFDDNIFSQ-ELVVSRPALWSPETPVLYQA 287 Query: 216 RTELWXXXXXXXXXXXXFGFRTVALDSQKGFFLNGRHVKLYGVCQHHDLGCLGAAVNKAA 275 ++++ FG RT+ + KGFFLNG+ GVC HHDLG LG AVN AA Sbjct: 288 VSKVYEGNILKDEYTTSFGIRTIEVIPNKGFFLNGKRTSFKGVCNHHDLGPLGGAVNDAA 347 Query: 276 LRRQFVLLQEMGVNAIRTAHNMPAVELMELADEMGVLIVSEAFDMWERSKTAYDYARFFP 335 +RRQ +L++MG NAIRT+HNMPA EL+ DEMG+++++E+FD W+ K Y F Sbjct: 348 IRRQIRILKDMGCNAIRTSHNMPAPELIRACDEMGMMVMAESFDEWKAMKVKNGYRHVFD 407 Query: 336 EWWTKDVASWVRRDRNHPSLIMWSIGNEIYDTHAGARGQELTRMLRDEVLAHDPRVNAFV 395 EW KD+ + +R RN+PS++MW IGNE+ + G +G +++ L++ DP V Sbjct: 408 EWAVKDLTNLLRHYRNNPSVVMWCIGNEVPEQWDGNKGPKMSYFLQELCHREDP--TRPV 465 Query: 396 TIGSNYMPWENAQKCADIVKVAGYNYGEKYYDRQHEEHPDWIIYGSETCSTVQSRGVYHF 455 T G + A ++ +AG+NY Y +++ P I+ GSET STV SRGVY F Sbjct: 466 TQGMDAPDAVVNNNMAAVMDIAGFNYRPHKYQENYKKLPQQIVLGSETASTVSSRGVYKF 525 Query: 456 PLAQPVLAD-DDQQCSSLGNSSTSWGAPSTEACITSDRDAAYSLGQFLWTGFDYIGEPTP 514 P+ + + DD Q SS S SW + I + D Y +G+F+WTGFDY+GEPTP Sbjct: 526 PVTRQWMKKYDDHQSSSYDVESCSWSNLPEDDFIQHE-DLPYCIGEFVWTGFDYLGEPTP 584 Query: 515 YHTK----NSYFGQLDTAGFPKDAYYIYQAEWTDYRTRPMIHIFPYWDFS--EGQLIDVR 568 Y+T +S FG +D AG PKD YY+Y++ W + + +HI P+W++ EG++ V Sbjct: 585 YYTDWPSHSSLFGIIDLAGLPKDRYYLYRSHWN--KEQETLHILPHWNWEGREGEITPVF 642 Query: 569 VCSNAPRIELFFNDISQGIYDIDHAHGGKLLGEXXXXGHL-------------PYTEGVL 615 V +N P ELF N SQG D + + +L Y G + Sbjct: 643 VYTNYPSAELFINGKSQGKRTKDLSVTIDNSADSVSIMNLKRQSRYRLMWMDTKYEPGTV 702 Query: 616 RAVAYDEQGNVIASAQRSSFGDAASLVLTPDKHVLAADGQDLIFVTVTAADRQGLPVENA 675 + VAYD G +A + + G + L D++V+ ADG+DL FVTV DR G +A Sbjct: 703 KVVAYDADGKAVAEKELHTAGKPDHIELVADRNVIKADGKDLSFVTVRVVDRDGNLCPDA 762 Query: 676 NNRIHLSVEGPGRLIGLDNGDSTDYDPYKGVSRRLFSGKLLAVIAGTLEPGTITLRASSP 735 ++ I V+G G NG++ + ++ ++FSG + A+++ T +PG ITL A+ Sbjct: 763 SHEISFKVKGEGSYRAGANGNAASLESFQHPKMKVFSGMMTAIVSSTEQPGKITLEATGK 822 Query: 736 EVASAELILQAAAPA 750 + LI+++ A Sbjct: 823 GLKKGALIIESCQEA 837 >dbj|BAC56904.1| beta-galactosidase [Bacteroides fragilis] Length = 833 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 266/792 (33%), Positives = 402/792 (50%), Gaps = 58/792 (7%) Query: 4 DTEWMPVSLPHDWLIYNTHALYEN---------------------------GEGWYRTVL 36 D +W V++PHDW IY ++ + G GWYR Sbjct: 50 DAKWQSVTVPHDWAIYGPFSINNDKQNVAISQDGQKEAMEHAGRTGGLPFVGVGWYRLNF 109 Query: 37 SLDEVPANQLMSLRFEGVYMNSTLYVNGHVAGEWKYGYSTFEFDITPYLTVGD-NMIYMR 95 + +L F+G ++ +Y+NG AG W YGY++F D TPYL G+ N + +R Sbjct: 110 DAPLFSKGKKATLVFDGAMSHAHVYINGQEAGYWPYGYNSFYVDATPYLKPGEKNTLAVR 169 Query: 96 VIHEAPNSRWYSGAGIYRPVWLKTTQKTHIAPDGIYISARPAGGGCWTVDVDCELRVEEG 155 + +E +SRWY GAG+YR V L + HI G ++ V++ +L V G Sbjct: 170 LENENESSRWYPGAGLYRNVHLVVNEDAHIPTWGTQLTTPIVKDEFAKVNLKTKLDVPAG 229 Query: 156 REPSGLKLRHTILDARGTVIRQEESVVHAEAGHQPVHTHSR-LTVERPQLWDIASPHLYT 214 + G ++ + D G V+ E + G + + V P LW +PHLY+ Sbjct: 230 KAFEGYRIVTELKDKDGKVVAANEK----KGGPFDDNVFEQDFVVTSPALWTPDTPHLYS 285 Query: 215 LRTELWXXXXXXXXXXXXFGFRTVALDSQKGFFLNGRHVKLYGVCQHHDLGCLGAAVNKA 274 ++++ FG R++ + KGFFLNG+ GVC H DLG LG N A Sbjct: 286 AVSKVYEGNTLKDESTTSFGIRSIEIIPNKGFFLNGKKTMFKGVCNHLDLGPLGGIANDA 345 Query: 275 ALRRQFVLLQEMGVNAIRTAHNMPAVELMELADEMGVLIVSEAFDMWERSKTAYDYARFF 334 +RRQ +L++MG AIRT+HNMPA EL++ DEMG++I++E+FD W+ +K Y + F Sbjct: 346 GIRRQIRILKDMGCYAIRTSHNMPAPELIKACDEMGMMIMAESFDEWKAAKVQNGYHKVF 405 Query: 335 PEWWTKDVASWVRRDRNHPSLIMWSIGNEIYDTHAGARGQELTRMLRDEVLAHDPRVNAF 394 EW KD+ + + + RN+PS++MW IGNE+ D G RG +L+R L+D DP Sbjct: 406 DEWVEKDLVNLIHQYRNNPSVVMWCIGNEVPDQWNGDRGPKLSRFLQDICHREDP--TRP 463 Query: 395 VTIGSNYMPWENAQKCADIVKVAGYNYGEKYYDRQHEEHPDWIIYGSETCSTVQSRGVYH 454 VT G + A ++ VAG+NY Y +++ P II GSET STV SRGVY Sbjct: 464 VTQGMDAPDAVVNNNMAAVMDVAGFNYRPHKYQENYKKLPQQIILGSETASTVSSRGVYK 523 Query: 455 FPLAQPVLAD-DDQQCSSLGNSSTSWGAPSTEACITSDRDAAYSLGQFLWTGFDYIGEPT 513 FP+ + + DD Q SS W + I + D Y +G+F+WTGFDY+GEPT Sbjct: 524 FPVVRRAMQKYDDHQSSSYDVEHCGWSNLPEDDFIQHE-DLPYCIGEFVWTGFDYLGEPT 582 Query: 514 PYHTK----NSYFGQLDTAGFPKDAYYIYQAEWTDYRTRPMIHIFPYWDFS--EGQLIDV 567 PY+T +S FG +D AG PKD YY+Y++ W + + +HI P+W++ EG++ V Sbjct: 583 PYYTDWPSHSSLFGIIDLAGLPKDRYYLYRSHWN--KDKETLHILPHWNWEGREGEVTPV 640 Query: 568 RVCSNAPRIELFFNDISQGIYDIDHAHGGKLLGEXXXXGHL-------------PYTEGV 614 V +N P ELF N SQG D + G+ + Y G Sbjct: 641 FVYTNYPSAELFINGKSQGKRTKDLSVTVNNSGDSTSVANFKRQQRYRLMWMDTKYEPGT 700 Query: 615 LRAVAYDEQGNVIASAQRSSFGDAASLVLTPDKHVLAADGQDLIFVTVTAADRQGLPVEN 674 ++ VAYD+ G +A + + G + L D+ V+ A+G+DL FVTV D++G Sbjct: 701 VKVVAYDKDGKAVAEKEIHTAGKPDHIELVADRSVIDANGKDLSFVTVKVVDKEGNLCPL 760 Query: 675 ANNRIHLSVEGPGRLIGLDNGDSTDYDPYKGVSRRLFSGKLLAVIAGTLEPGTITLRASS 734 A N I V+G G NG+ + ++ ++FSG + A++ T + G ITL A+ Sbjct: 761 AENEISFKVKGAGTYRAGANGNPASLESFQTPKMKVFSGMMTAIVQSTEKAGKITLEATG 820 Query: 735 PEVASAELILQA 746 + L++++ Sbjct: 821 KGLKKGTLLIES 832 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.136 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,781,306,561 Number of extensions: 78075136 Number of successful extensions: 149732 Number of sequences better than 1.0e-05: 332 Number of HSP's gapped: 148941 Number of HSP's successfully gapped: 349 Length of query: 1142 Length of database: 757,237,578 Length adjustment: 137 Effective length of query: 1005 Effective length of database: 385,269,015 Effective search space: 387195360075 Effective search space used: 387195360075 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)