BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0341.0035.p (713 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_624111.1| N-methylhydaintoinase A [Thermoanaerobacter ten... 640 0.0 ref|NP_624938.1| putative ATP utilising protein [Streptomyces co... 485 e-135 ref|ZP_00035595.1| COG0145: N-methylhydantoinase A/acetone carbo... 479 e-133 gb|EAK65694.1| unknown [environmental sequence] 407 e-112 gb|EAJ43092.1| unknown [environmental sequence] 396 e-108 >ref|NP_624111.1| N-methylhydaintoinase A [Thermoanaerobacter tengcongensis] gb|AAM25715.1| N-methylhydaintoinase A [Thermoanaerobacter tengcongensis] Length = 714 Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/707 (47%), Positives = 455/707 (64%), Gaps = 3/707 (0%) Query: 5 QIRIGIDVGGTFTDAVAIDNETFEVLSKVKMPTTHHDERGVASGIVQIIQRIMSENGIQP 64 ++RIGIDVGGTFTDAVAIDN+T+E++ +K+PTTH + GVA GIV+ + ++M E+ I P Sbjct: 2 KVRIGIDVGGTFTDAVAIDNDTYELIGTIKVPTTHTAKEGVAKGIVEALMKLMEEHNINP 61 Query: 65 EDIKFIAHGTTQATNALLEGDVARVGILGMGTGLDARSARSETNVANIELAAGKYLTTYH 124 ED+ FIAHGTTQATNALLEGDV VGI+ G GL+ +S+TN+ +IELA GK L Sbjct: 62 EDVLFIAHGTTQATNALLEGDVVPVGIIAAGKGLEGIKVKSDTNIQDIELAPGKILKIAS 121 Query: 125 KFIDSKELTREAIDDAIEQLLAEGAEVIVASEAYSVDDPANELRVIEAARSRGVYATGGH 184 ++I+ E + ++ IE+ + IVA++A+SVDDP E +++E A +G+ AT H Sbjct: 122 QYIELDEEFEKKVEMKIEEFKNQEIGAIVAAQAFSVDDPTIENKIVEIAEQKGLPATATH 181 Query: 185 EISQLYGLKTRTRTAVVNASLIPKMMETANMTEQAVKEAGITSQLMIMRCDGGVMSIDEV 244 EI++LYGLK RTRTA +NA ++PKM+ETANMTE +VK++GI + LMIMR DGGVM+I EV Sbjct: 182 EITKLYGLKIRTRTAAINACILPKMIETANMTEDSVKKSGIKAPLMIMRGDGGVMNIAEV 241 Query: 245 RKRPILTMXXXXXXXXXXXXMYEKISDGIFFEVGGTSVDISVIKNGKVMIENAQVGGHKT 304 RKRPILT+ MYEK+SDGIF EVGGTS DIS IK GKVM+ A++GGHKT Sbjct: 242 RKRPILTLLSGPAAGVAGALMYEKVSDGIFLEVGGTSTDISAIKAGKVMVNYAEIGGHKT 301 Query: 305 YLRSLDVRTLAVAGGSMIQIGAGKITDVGPRSAHIAGLEYECFTGKENLQQPSIGLVSPR 364 YL SLDVRT+ +AGGSMI++G I DVGPRSAHIAGL Y ++ E + +P I + P+ Sbjct: 302 YLNSLDVRTVGIAGGSMIRLGDKDIEDVGPRSAHIAGLPYAVYSDPEEIIEPEIVYIKPK 361 Query: 365 KGDPD-YVTVRGAEGHEYXXXXXXXXXXXXHVPDEDYARGNMESTRIAWEALGAHLGMSX 423 K DPD YV ++ G + +V EDYA GN E+ R A E + L + Sbjct: 362 KNDPDNYVAIKSKNGKIFAVTVSCAANVLGYVKPEDYAYGNQEAARKALEPIAKKLNKTV 421 Query: 424 XXXXXXXXXXXXXKVMAVVNQMISDYELDTGFITLVXXXXXXAVLVPAMAAKEGFKHQIA 483 KV VV Q+++DY+LD LV A +VP +A G H+IA Sbjct: 422 EEVAERIMNIASMKVAKVVEQLLNDYKLDKDTTILVGGGGGSASIVPYVAKIMGMHHRIA 481 Query: 484 NNAPYISTIGVGMAMVREQIEKTVVGATERDIKLIRAEIMEKIVQSGANESTVDVTIEID 543 NA ISTIGV +AMVRE +E+T+ TE+DI IR E E +++SGA E TV++ +EID Sbjct: 482 KNAQVISTIGVALAMVREIVERTIQNPTEKDILSIRNEAKEAVIKSGALEETVEIYVEID 541 Query: 544 SQRNILRAIATGSTELRSKDLASREVPVNELVLTAAEALGXXXXTELKA--ASGRWFLFE 601 SQ+NI+RAIATG+TELRSKD+ ++ + E+ AA+A+ L+ +G ++ + Sbjct: 542 SQKNIVRAIATGATELRSKDILNKNLGEEEIKKIAAQAMKLESIKNLQIIDKTGSMYIIK 601 Query: 602 SSEVKKSMFGLVKKKLSHVGVLDREGVVRFKKTNAYHLAFLKKNIDDRFASFLEENTVYS 661 E +K FGL+ +K V V+++EGV+R K N K ++ LE+N Y Sbjct: 602 GIEYRKRFFGLLSQKQERVVVINKEGVIRLHKNNGKVYRTTIKTFENDLNKALEQNIFYG 661 Query: 662 DANATIPKTFIFYKEKMLDLTGMQTKEQLFSILEVETQLLEDNSEML 708 D A IP FI +++DL+G+ KEQ+ S+ +VE L DN +L Sbjct: 662 DGGAEIPDCFIILPNRIVDLSGLIDKEQIISLAKVEISGLSDNDRIL 708 >ref|NP_624938.1| putative ATP utilising protein [Streptomyces coelicolor A3(2)] emb|CAB62756.1| putative ATP utilising protein [Streptomyces coelicolor A3(2)] Length = 709 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 283/711 (39%), Positives = 414/711 (58%), Gaps = 6/711 (0%) Query: 1 MGNKQIRIGIDVGGTFTDAVAIDNETFEVLSKVKMPTTHHDERGVASGIVQIIQRIMSEN 60 M +IR+GIDVGGTFTDAVA+D T ++ +VK+PT+HH E GVA GIV+ + R++++ Sbjct: 1 MTTHRIRVGIDVGGTFTDAVAVDATTLRLVGQVKVPTSHHHEDGVAHGIVEALDRLLTQT 60 Query: 61 GIQPEDIKFIAHGTTQATNALLEGDVARVGILGMGTGLDARSARSETNVANIELAAGKYL 120 G P D+ F+AHGTTQATNALLEGDVA VG+LG+GTG R +A +EL GK L Sbjct: 61 GHAPADVAFLAHGTTQATNALLEGDVATVGLLGIGTGGGTYFTRRLATLAKLELTPGKRL 120 Query: 121 TTYHKFIDSKELTREAIDDAIEQLLAEGAEVIVASEAYSVDDPANELRVIEAARSRGVYA 180 ++ + E A+ A+EQL A GA+ +VASE + VD P E V EAAR+ G+ Sbjct: 121 PLHYAHVPDPE-DAPAVRAAVEQLTAAGAQALVASEPFGVDRPEGEEAVAEAARATGLPT 179 Query: 181 TGGHEISQLYGLKTRTRTAVVNASLIPKMMETANMTEQAVKEAGITSQLMIMRCDGGVMS 240 T HEI+ LYGL+ RTRTAVVNA+++P+M+ TA++ + ++ +AG+T+ LM+MRCDGGVMS Sbjct: 180 TAAHEITSLYGLRKRTRTAVVNAAILPRMLATADLVDASITKAGVTAPLMVMRCDGGVMS 239 Query: 241 IDEVRKRPILTMXXXXXXXXXXXXMYEKISDGIFFEVGGTSVDISVIKNGKVMIENAQVG 300 +DE+R+RP+LT+ M E++S+G+F E GGTS DISV++ GKV + +A + Sbjct: 240 LDEMRRRPLLTVLSGPAAGVAGALMQERVSEGVFLETGGTSTDISVVRRGKVAVRHAVLL 299 Query: 301 GHKTYLRSLDVRTLAVAGGSMIQIGAGKITDVGPRSAHIAGLEYECFTGKENLQQPSIGL 360 G +YL +LDVRT+ V GGSM+++ G++T GPRSAHIAGL Y C+ +L+ + Sbjct: 300 GRTSYLNALDVRTVGVGGGSMVRVSGGRVTGTGPRSAHIAGLPYACYADPADLRDAKLTT 359 Query: 361 VSPRKGDPDYVTVRGAEGHEYXXXXXXXXXXXXHVPDEDYARGNMESTRIAWEALGAHLG 420 +SP GDP V A G + VP+ D+A + ++ R A L A LG Sbjct: 360 ISPLPGDPADYAVLDAAGGRFALTMTCAANALGRVPEGDFAHADPDTARAALAPLAAALG 419 Query: 421 MSXXXXXXXXXXXXXXKVMAVVNQMISDYELDTGFITLVXXXXXXAVLVPAMAAKEGFKH 480 +V +VV+ ++ +Y LDT LV A + P +AA+ G Sbjct: 420 TDVDTAAARLLDAGTDQVKSVVDDLVREYRLDTDTAVLVGGGGGAASVTPHLAARTGMTG 479 Query: 481 QIANNAPYISTIGVGMAMVREQIEKTVVGATERDIKLIRAEIMEKIVQSGANESTVDVTI 540 +IA ++ IS IGV +A+VREQ+E+ V GAT+ I +RAE +V GA V+V + Sbjct: 480 RIARHSEVISPIGVALALVREQVERIVPGATQEQILAVRAEAERAVVAQGAAADGVEVEV 539 Query: 541 EIDSQRNILRAIATGSTELRSKDLASREVPVNELVLTAAEALGXXXXTELKAASGRWFLF 600 +D Q N++RAIATG+TELR++D A R L L A + A + ++ Sbjct: 540 TVDPQTNVVRAIATGATELRTQDRAHRADDAERLRLAATSLKTDPSKVHVLAGTPAHTVY 599 Query: 601 ESSEVKKSMFGLVKKKLSHVGVLDREGVVRFKKTNAYHLAFLKKNIDDRFASFLEENTVY 660 +EV + F V+ V V+D +GVVR +A A + A + E+T Y Sbjct: 600 -GTEVHRR-FRPVRHP---VRVVDADGVVRHHAPDARVEATTVAAAPEVLAKLVTEHTSY 654 Query: 661 SDANATIPKTFIFYKEKMLDLTGMQTKEQLFSILEVETQLLEDNSEMLAVV 711 D P + ++ DL+G+ E L ++ E + + ++AV+ Sbjct: 655 GDGGVRAPAVRLLLGSRIADLSGVLDPEPLLALARSELRSRAADEPVVAVL 705 >ref|ZP_00035595.1| COG0145: N-methylhydantoinase A/acetone carboxylase, beta subunit [Enterococcus faecium] Length = 715 Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust. Identities = 273/707 (38%), Positives = 409/707 (57%), Gaps = 11/707 (1%) Query: 6 IRIGIDVGGTFTDAVAIDNETFEVLSKVKMPTTHHDERGVASGIVQIIQRIMSENGIQPE 65 +R+GIDVGGT T AVAIDN T E++ K + TTH D RGVA+G+VQ Q + EN I PE Sbjct: 11 VRMGIDVGGTHTKAVAIDNATHEIIGKSSVKTTHDDVRGVAAGVVQSFQNCLRENNISPE 70 Query: 66 DIKFIAHGTTQATNALLEGDVARVGILGMGTG-LDARSARSETNVANIELAAGKYLTTYH 124 D+ F+AH TTQATNAL+EGDVA+VG++GM G L+ A+ +T + +I+L K + + Sbjct: 71 DVVFVAHSTTQATNALIEGDVAKVGVIGMAKGGLEGFLAKRQTRLNDIDLGNKKKIEIVN 130 Query: 125 KFIDSKELTREAIDDAIEQLLAEGAEVIVASEAYSVDDPANELRVIEAARSRGVYATGGH 184 F+ K L + + + I L E AEV+V+S A+ VD+ E V EAA + + T Sbjct: 131 AFLPVKHLNVDRVSETISSLERERAEVLVSSMAFGVDNGEPERVVYEAASVKSIPTTMAS 190 Query: 185 EISQLYGLKTRTRTAVVNASLIPKMMETANMTEQAVKEAGITSQLMIMRCDGGVMSIDEV 244 +I++LYGL RTRTA +NAS++PKM++TA TE +V+EAG+ LMIMR DGGVM I+E+ Sbjct: 191 DITKLYGLTRRTRTAAINASILPKMLDTATSTEDSVREAGVNVSLMIMRGDGGVMEINEM 250 Query: 245 RKRPILTMXXXXXXXXXXXXMYEKISDGIFFEVGGTSVDISVIKNGKVMIENAQVGGHKT 304 +KRP+LTM MY + S+G++FEVGGT+ +I VIKNG+ I+ + VGGH T Sbjct: 251 KKRPVLTMLSGPAASVMGSLMYLRASNGVYFEVGGTTTNIGVIKNGRPAIDYSIVGGHPT 310 Query: 305 YLRSLDVRTLAVAGGSMIQIGAGKITDVGPRSAHIAGLEYECFTGKENLQQPSIGLVSPR 364 Y+ SLDVR L VAGGSM++ I DVGPRSAHIAGL+Y FT E ++ P + SP+ Sbjct: 311 YISSLDVRVLGVAGGSMVRANQSGIIDVGPRSAHIAGLDYAVFTETEKIKGPKVEFFSPK 370 Query: 365 KGDP-DYVTVRGAEGHEYXXXXXXXXXXXXHVPDEDYARGNMESTRIAWEALGAHLGMSX 423 +GDP DYV V +G E V +E ++ GN+ S R A +AL + + Sbjct: 371 EGDPADYVKVVMEDGEEVTITNTCAANVLGLVQEEHFSYGNVPSARKAIQALADYCHTTV 430 Query: 424 XXXXXXXXXXXXXKVMAVVNQMISDYELDTGFITLVXXXXXXAVLVPAMAAKEGFKHQIA 483 K+ V+ ++ Y L+ I+LV A L+ + K G K+ I Sbjct: 431 EDIAEQIMEKSYAKIEPVILELADKYHLEKDQISLVGVGGGAASLITYFSNKMGVKYSIP 490 Query: 484 NNAPYISTIGVGMAMVREQIEKTVVGATERDIKLIRAEIMEKIVQSGANESTVDVTIEID 543 NA IS+IGV +AMVR+ +E+ + ++ DI+ ++ E M K ++SGA +++V +EID Sbjct: 491 ENAEVISSIGVALAMVRDVVERIIPSPSKEDIRSLKNEAMNKAIESGATPESIEVHVEID 550 Query: 544 SQRNILRAIATGSTELRSKDLASREVPVNELVLTAAEALGXXXXTELKAASGRWFLFESS 603 Q + + AIATGSTE+++ DL ++E+ E + AAE + E+ F + Sbjct: 551 PQTSKVTAIATGSTEVKATDL-TKEITTEEALELAAEDM-RLNKNEVCLLENTPFFYVCG 608 Query: 604 EVKKSMFGLVKKKLSHVGVLDREGVVRFKKTNAYHLAFLKKNIDDRFASFLEENTVYSDA 663 E +S K + ++D++G ++ ++ +A + N E+ VY Sbjct: 609 EQNRS------KNAGSLRIIDQKGFIKVQRGHASCMKTTAANYMTAVEQLWEDMAVYQTE 662 Query: 664 NATIPKTFIFYKEKMLDLTGMQTKEQLFSILEVETQLLEDNSEMLAV 710 P+ ++ ++ D T EQL ++++E +E E++ V Sbjct: 663 LIARPEFYLCLGARVSDFTATDL-EQLQLLMDLEVSTMEPEEEVIVV 708 >gb|EAK65694.1| unknown [environmental sequence] Length = 560 Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust. Identities = 216/561 (38%), Positives = 337/561 (60%), Gaps = 3/561 (0%) Query: 1 MGNKQIRIGIDVGGTFTDAVAIDNETFEVLSKVKMPTTHHDERGVASGIVQIIQRIMSEN 60 M N++IRIGIDVGGTFT A+A+D + E+LS +PTTH ERGV++GIV ++ ++ E+ Sbjct: 1 MSNRRIRIGIDVGGTFTKAIALDIVSGEILSTSTIPTTHTAERGVSAGIVSVLSDLLKES 60 Query: 61 GIQPEDIKFIAHGTTQATNALLEGDVARVGILGMGTGLDARSARSETNVANIELAAGKYL 120 I+ ++I+ IAH TTQA NALLE D A+VGI+ MG G + TN+ + ++ + Sbjct: 61 QIRLDEIEIIAHSTTQAINALLESDTAKVGIVAMGVGPEKSDVIKRTNLHDAQINHENDI 120 Query: 121 TTYHKFIDSKEL-TREAIDDAIEQLLAEGAEVIVASEAYSVDDPANELRVIEAARSRGVY 179 + H+F+D+ L T + AI++L EGA+VIVA+EA+ VDDP+NE ++E A + + Sbjct: 121 KSSHRFLDTSHLITDSEVSTAIKELKDEGAKVIVATEAFGVDDPSNEQFIMEHATKQQIP 180 Query: 180 ATGGHEISQLYGLKTRTRTAVVNASLIPKMMETANMTEQAVKEAGITSQLMIMRCDGGVM 239 +T HEIS +YGL+ RT TA +NAS++PK ++ N E+A++E G+T+ LMIM+ DGGV Sbjct: 181 STASHEISGIYGLEIRTLTAAINASVLPKTVQVGNFVEEAIRETGVTAPLMIMKGDGGVT 240 Query: 240 SIDEVRKRPILTMXXXXXXXXXXXXMYEKISDGIFFEVGGTSVDISVIKNGKVMIENAQV 299 S+D R +PILT+ +Y KI++GIF EVGGTS +I +IKNGK I + Sbjct: 241 SMDTFRTKPILTVLSGPAASVAGALLYLKITNGIFVEVGGTSTNICIIKNGKPEIRYVTI 300 Query: 300 GGHKTYLRSLDVRTLAVAGGSMIQIGAGKITDVGPRSAHIAGLEYECFTGKENLQQPSIG 359 H T +RS+DVR L VAGGSM+Q+ + + VGPRSAHIAGL+Y C+ ++L I Sbjct: 301 KNHPTCIRSMDVRVLGVAGGSMVQVKSNTVVGVGPRSAHIAGLKYSCYAPIDDLSTGEII 360 Query: 360 LVSPRKGD-PDYVTVRGAEGHEYXXXXXXXXXXXXHVPDEDYARGNMESTRIAWEALGAH 418 V P+ D +YV ++ + Y +P+ DY+ + + + A E LG Sbjct: 361 FVKPKPNDIEEYVAIK-CKNETYAITNTCAANALGRIPEGDYSYSDPATAKRALEILGKK 419 Query: 419 LGMSXXXXXXXXXXXXXXKVMAVVNQMISDYELDTGFITLVXXXXXXAVLVPAMAAKEGF 478 LG+S + V ++I ++EL+ + +V +VL P +A + Sbjct: 420 LGVSGAQVALSILQNASFDITNEVTKIIKEFELEKSKVKIVGGGGGASVLAPFVAEQLQL 479 Query: 479 KHQIANNAPYISTIGVGMAMVREQIEKTVVGATERDIKLIRAEIMEKIVQSGANESTVDV 538 ++ A+ A IS+IGV +M++EQ+E+TVV I ++ +I +++ G+ ++ + Sbjct: 480 QYDRADYAEVISSIGVASSMMQEQLEETVVNPNPEQISNLQKKIHNILIEKGSTPESISI 539 Query: 539 TIEIDSQRNILRAIATGSTEL 559 ++++LR A G+ EL Sbjct: 540 DSVYIPEKSLLRVTAFGNVEL 560 >gb|EAJ43092.1| unknown [environmental sequence] Length = 540 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 206/540 (38%), Positives = 324/540 (60%), Gaps = 3/540 (0%) Query: 1 MGNKQIRIGIDVGGTFTDAVAIDNETFEVLSKVKMPTTHHDERGVASGIVQIIQRIMSEN 60 M +++IRIGIDVGGTFT A+A+D T E+LS +PTTH +RGV+ GIV ++ ++ E+ Sbjct: 1 MSDRRIRIGIDVGGTFTKAIALDIVTGEILSTSTIPTTHTAQRGVSVGIVSVLTDLLKES 60 Query: 61 GIQPEDIKFIAHGTTQATNALLEGDVARVGILGMGTGLDARSARSETNVANIELAAGKYL 120 I+ +I+ IAH TTQA NALLE D A+VGI+ MG G + TN+++ ++ + Sbjct: 61 NIRLNEIEIIAHSTTQAINALLESDTAKVGIVAMGVGPEKSDVIKRTNLSDAKINLDNDI 120 Query: 121 TTYHKFIDSKEL-TREAIDDAIEQLLAEGAEVIVASEAYSVDDPANELRVIEAARSRGVY 179 + H+F+D+ L T + AI++L EGA+VIVA+EA+ VDDP+NE ++E A + Sbjct: 121 KSSHRFLDTSHLITDSEVSTAIKELKDEGAKVIVATEAFGVDDPSNEEFIMEHATKLEIP 180 Query: 180 ATGGHEISQLYGLKTRTRTAVVNASLIPKMMETANMTEQAVKEAGITSQLMIMRCDGGVM 239 +T HEIS +YGL+ RT TA +NAS++PK ++ N EQA++E G+T+ LMIM+ DGGV Sbjct: 181 STASHEISGIYGLEIRTLTAAINASVLPKTVQVGNFVEQAIRETGVTAPLMIMKGDGGVT 240 Query: 240 SIDEVRKRPILTMXXXXXXXXXXXXMYEKISDGIFFEVGGTSVDISVIKNGKVMIENAQV 299 S+D R +PILT+ +Y K+++GIF EVGGTS +I +IKNGK I + Sbjct: 241 SMDTFRSKPILTVLSGPAASVAGALLYLKVTNGIFVEVGGTSTNICIIKNGKPEIRYVTI 300 Query: 300 GGHKTYLRSLDVRTLAVAGGSMIQIGAGKITDVGPRSAHIAGLEYECFTGKENLQQPSIG 359 H T +RS+DVR L VAGGSM+ + + + VGPRSAHIAG++Y C+ + L I Sbjct: 301 KNHPTCIRSMDVRVLGVAGGSMVSLDSNTVARVGPRSAHIAGMKYSCYADVDELSTGEII 360 Query: 360 LVSPRKGDPD-YVTVRGAEGHEYXXXXXXXXXXXXHVPDEDYARGNMESTRIAWEALGAH 418 V P++ D D YV ++ + + + + DY+ N ES ++A LG Sbjct: 361 FVKPKETDIDEYVAIK-CKNETFAITNTCAANALGMIEEGDYSYSNPESAKLALNILGKK 419 Query: 419 LGMSXXXXXXXXXXXXXXKVMAVVNQMISDYELDTGFITLVXXXXXXAVLVPAMAAKEGF 478 +G++ + + +I ++EL++ + L+ +VLVP +A + Sbjct: 420 IGVTGAQAALSIIQTASFDITKTITNIIKEFELESSKVKLIGGGGGASVLVPFVAKQLNL 479 Query: 479 KHQIANNAPYISTIGVGMAMVREQIEKTVVGATERDIKLIRAEIMEKIVQSGANESTVDV 538 +Q A+ A IS+IGV +M++EQ+E+TVV I + ++ + +++ G+ ++ + Sbjct: 480 DYQKADYAEVISSIGVASSMMQEQLEETVVNPNPEQISQMHKKLHDLLIEKGSTPESISI 539 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.316 0.132 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 877,310,634 Number of extensions: 33061298 Number of successful extensions: 88519 Number of sequences better than 1.0e-05: 254 Number of HSP's gapped: 88210 Number of HSP's successfully gapped: 265 Length of query: 713 Length of database: 757,237,578 Length adjustment: 133 Effective length of query: 580 Effective length of database: 396,129,411 Effective search space: 229755058380 Effective search space used: 229755058380 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 130 (54.7 bits)