BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0327.0018.p (89 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P02959|SASA_BACME SMALL, ACID-SOLUBLE SPORE PROTEIN A (SASP) ... 58 6e-08 dbj|BAC13089.1| small acid-soluble spore protein 1 (alpha:beta-t... 57 1e-07 ref|NP_654798.1| SASP, Small, acid-soluble spore proteins, alpha... 57 2e-07 ref|NP_692054.2| small acid-soluble spore protein 1 [Oceanobacil... 57 2e-07 sp|P22065|SAS1_CLOBI SMALL, ACID-SOLUBLE SPORE PROTEIN ALPHA (SA... 56 3e-07 >sp|P02959|SASA_BACME SMALL, ACID-SOLUBLE SPORE PROTEIN A (SASP) pir||USBSAM small acid-soluble spore protein A - Bacillus megaterium gb|AAA22285.1| small, acid-soluble spore protein A Length = 62 Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/87 (43%), Positives = 44/87 (50%), Gaps = 28/87 (32%) Query: 1 MARNNRTVVPESRAMLKQMQYEIASEFGLYGASYGGGADTEFASELGVTGSSIGYGTPYL 60 MA N+ V P S A + QM+YEIASEFG+ LG Sbjct: 1 MANTNKLVAPGSAAAIDQMKYEIASEFGV---------------NLGP------------ 33 Query: 61 GHLTSRDNGSVGGEITKRLVKQAEQSL 87 T+R NGSVGGEITKRLV+ AEQ L Sbjct: 34 -EATARANGSVGGEITKRLVQMAEQQL 59 >dbj|BAC13089.1| small acid-soluble spore protein 1 (alpha:beta-type) [Oceanobacillus iheyensis HTE831] Length = 74 Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/89 (44%), Positives = 46/89 (51%), Gaps = 30/89 (33%) Query: 1 MARN--NRTVVPESRAMLKQMQYEIASEFGLYGASYGGGADTEFASELGVTGSSIGYGTP 58 MA N N+ VVP + L QM+YEIA EFG+ GADT Sbjct: 12 MANNSSNQLVVPGVQQALDQMKYEIAQEFGV-----SLGADT------------------ 48 Query: 59 YLGHLTSRDNGSVGGEITKRLVKQAEQSL 87 TSR NGSVGGEITKRLV+ A+Q L Sbjct: 49 -----TSRANGSVGGEITKRLVQTAQQQL 72 >ref|NP_654798.1| SASP, Small, acid-soluble spore proteins, alpha/beta type [Bacillus anthracis A2012] ref|NP_830661.1| Small acid-soluble spore protein [Bacillus cereus ATCC 14579] ref|NP_843371.1| small acid-soluble spore protein [Bacillus anthracis str. Ames] ref|NP_977271.1| small acid-soluble spore protein [Bacillus cereus ATCC 10987] gb|AAP07862.1| Small acid-soluble spore protein [Bacillus cereus ATCC 14579] gb|AAP24857.1| small acid-soluble spore protein [Bacillus anthracis str. Ames] gb|AAS39879.1| small acid-soluble spore protein [Bacillus cereus ATCC 10987] Length = 67 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 28/83 (33%) Query: 5 NRTVVPESRAMLKQMQYEIASEFGLYGASYGGGADTEFASELGVTGSSIGYGTPYLGHLT 64 N+ VVP + A + QM+YEIA EFG+ GAD+ T Sbjct: 8 NQLVVPGATAAIDQMKYEIAQEFGVQL-----GADS-----------------------T 39 Query: 65 SRDNGSVGGEITKRLVKQAEQSL 87 +R NGSVGGEITKRLV AEQSL Sbjct: 40 ARANGSVGGEITKRLVAMAEQSL 62 >ref|NP_692054.2| small acid-soluble spore protein 1 [Oceanobacillus iheyensis HTE831] Length = 63 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/89 (44%), Positives = 46/89 (51%), Gaps = 30/89 (33%) Query: 1 MARN--NRTVVPESRAMLKQMQYEIASEFGLYGASYGGGADTEFASELGVTGSSIGYGTP 58 MA N N+ VVP + L QM+YEIA EFG+ GADT Sbjct: 1 MANNSSNQLVVPGVQQALDQMKYEIAQEFGV-----SLGADT------------------ 37 Query: 59 YLGHLTSRDNGSVGGEITKRLVKQAEQSL 87 TSR NGSVGGEITKRLV+ A+Q L Sbjct: 38 -----TSRANGSVGGEITKRLVQTAQQQL 61 >sp|P22065|SAS1_CLOBI SMALL, ACID-SOLUBLE SPORE PROTEIN ALPHA (SASP) (ASSP) pir||A61028 small acid-soluble spore protein alpha - Clostridium bifermentans prf||1610173A small acid soluble protein alpha Length = 70 Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 23/84 (27%) Query: 4 NNRTVVPESRAMLKQMQYEIASEFGLYGASYGGGADTEFASELGVTGSSIGYGTPYLGHL 63 NN VPE++A LKQM+ EIA+E G+ Y T G++ Sbjct: 5 NNTKAVPEAKAALKQMKLEIANELGISN-----------------------YDTADKGNM 41 Query: 64 TSRDNGSVGGEITKRLVKQAEQSL 87 T+R NG VGG +TK+LV+ AEQ + Sbjct: 42 TARQNGYVGGYMTKKLVEMAEQQM 65 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.312 0.131 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 130,360,232 Number of extensions: 4875814 Number of successful extensions: 10689 Number of sequences better than 1.0e-05: 13 Number of HSP's gapped: 10686 Number of HSP's successfully gapped: 13 Length of query: 89 Length of database: 757,237,578 Length adjustment: 58 Effective length of query: 31 Effective length of database: 599,761,836 Effective search space: 18592616916 Effective search space used: 18592616916 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 120 (50.8 bits)