BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0327.0003.p (332 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_847679.1| mbl protein [Bacillus anthracis str. Ames] >gi|... 469 e-131 ref|NP_981696.1| mbl protein [Bacillus cereus ATCC 10987] >gi|41... 469 e-131 sp|P39751|MBL_BACSU MreB-like protein (Mbl protein) >gi|2120019|... 468 e-131 ref|NP_834944.1| Rod shape-determining protein mreB [Bacillus ce... 466 e-130 ref|NP_244606.1| cell shape determining protein (MreB-like prote... 461 e-129 >ref|NP_847679.1| mbl protein [Bacillus anthracis str. Ames] gb|AAP29165.1| mbl protein [Bacillus anthracis str. Ames] Length = 333 Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust. Identities = 226/326 (69%), Positives = 276/326 (84%) Query: 1 MLSKDIGIDLGTANVLIHVKGRGVVLDEPSVVTLESDTKKVLAVGEQARRMVGRTPGNIM 60 M ++DIGIDLGTANVLIHVKG+G+VL+EPSVV ++ +T KVLAVGE+AR MVGRTPGNI+ Sbjct: 1 MFARDIGIDLGTANVLIHVKGKGIVLNEPSVVAIDRNTGKVLAVGEEARSMVGRTPGNIV 60 Query: 61 TIRPLRDGVIADFAITEMMLKSFIDRVGGRSWYARPRILICAPTNITSVEQKSIREAAER 120 IRPL+DGVIADF ITE MLK FI+++ +S++++PRILIC PTNITSVEQK+IREAAER Sbjct: 61 AIRPLKDGVIADFEITEAMLKYFINKLDVKSFFSKPRILICCPTNITSVEQKAIREAAER 120 Query: 121 SGAKEVFMEEEPKAAAIGAGMDIYQPSGNMVVDIGGGTTDVAVLSMGDVVTASSIKIAGD 180 SG K VF+EEEPK AA+GAGM+I+QPSGNMVVDIGGGTTD+AVLSMGD+VT+SSIK+AGD Sbjct: 121 SGGKTVFLEEEPKVAAVGAGMEIFQPSGNMVVDIGGGTTDIAVLSMGDIVTSSSIKMAGD 180 Query: 181 KFDEAXXXXXXXXXXXXXGERTAEDIKLNIGSVRPGGMKSEMDIRGRDMVSGLPQTLTIS 240 KFD GERT+EDIK+ +G+V PG E++IRGRDMV+GLP+T+T+ Sbjct: 181 KFDMEILNYIKRKYKLLIGERTSEDIKIKVGTVFPGARSEELEIRGRDMVTGLPRTITVC 240 Query: 241 SGEVKEALWDPVSSIVAAAKSVLERTPPELSADIIDRGVVLTGGGALLNGLDELLSEELH 300 S E+ EAL + + IV AAK VLERTPPELSADIIDRGV+LTGGGALL+G+D LL+EEL Sbjct: 241 SEEITEALKENAAVIVQAAKGVLERTPPELSADIIDRGVILTGGGALLHGIDMLLAEELK 300 Query: 301 VPVWVAEDPMHCVVKGTGIMLDHLDK 326 VPV +AE+PMHCV GTGIML+++DK Sbjct: 301 VPVLIAENPMHCVAVGTGIMLENIDK 326 >ref|NP_981696.1| mbl protein [Bacillus cereus ATCC 10987] sp|P32444|MBL_BACCE MreB-like protein (Mbl protein) pir||PN0441 mreB protein - Bacillus cereus emb|CAA44237.1| MREB [Bacillus cereus] emb|CAB40597.1| mreB-like protein [Bacillus cereus] gb|AAS44304.1| mbl protein [Bacillus cereus ATCC 10987] Length = 333 Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust. Identities = 226/332 (68%), Positives = 278/332 (83%) Query: 1 MLSKDIGIDLGTANVLIHVKGRGVVLDEPSVVTLESDTKKVLAVGEQARRMVGRTPGNIM 60 M ++DIGIDLGTANVLIHVKG+G+VL+EPSVV ++ +T KVLAVGE+AR MVGRTPGNI+ Sbjct: 1 MFARDIGIDLGTANVLIHVKGKGIVLNEPSVVAIDRNTGKVLAVGEEARSMVGRTPGNIV 60 Query: 61 TIRPLRDGVIADFAITEMMLKSFIDRVGGRSWYARPRILICAPTNITSVEQKSIREAAER 120 IRPL+DGVIADF ITE MLK FI+++ +S++++PRILIC PTNITSVEQK+IREAAER Sbjct: 61 AIRPLKDGVIADFEITEAMLKYFINKLDVKSFFSKPRILICCPTNITSVEQKAIREAAER 120 Query: 121 SGAKEVFMEEEPKAAAIGAGMDIYQPSGNMVVDIGGGTTDVAVLSMGDVVTASSIKIAGD 180 SG K VF+EEEPK AA+GAGM+I+QPSGNMVVDIGGGTTD+AVLSMGD+VT+SSIK+AGD Sbjct: 121 SGGKTVFLEEEPKVAAVGAGMEIFQPSGNMVVDIGGGTTDIAVLSMGDIVTSSSIKMAGD 180 Query: 181 KFDEAXXXXXXXXXXXXXGERTAEDIKLNIGSVRPGGMKSEMDIRGRDMVSGLPQTLTIS 240 KFD GERT+EDIK+ +G+V PG E++IRGRDMV+GLP+T+T+ Sbjct: 181 KFDMEILNYIKRKYKLLIGERTSEDIKIKVGTVFPGARSEELEIRGRDMVTGLPRTITVC 240 Query: 241 SGEVKEALWDPVSSIVAAAKSVLERTPPELSADIIDRGVVLTGGGALLNGLDELLSEELH 300 S E+ EAL + + IV AAK VLERTPPELSADIIDRGV+LTGGGALL+G+D LL+EEL Sbjct: 241 SEEITEALKENAAVIVQAAKGVLERTPPELSADIIDRGVILTGGGALLHGIDMLLAEELK 300 Query: 301 VPVWVAEDPMHCVVKGTGIMLDHLDKNVKKKF 332 VPV +AE+PMHCV GTGIML+++D+ K+ Sbjct: 301 VPVLIAENPMHCVAVGTGIMLENIDRLPKRAL 332 >sp|P39751|MBL_BACSU MreB-like protein (Mbl protein) pir||I40531 cell shape determining protein mbl - Bacillus subtilis gb|AAA67878.1| Mbl protein emb|CAB15658.2| MreB-like protein [Bacillus subtilis subsp. subtilis str. 168] Length = 333 Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust. Identities = 226/332 (68%), Positives = 278/332 (83%) Query: 1 MLSKDIGIDLGTANVLIHVKGRGVVLDEPSVVTLESDTKKVLAVGEQARRMVGRTPGNIM 60 M ++DIGIDLGTANVLIHVKG+G+VL+EPSVV L+ ++ KVLAVGE+ARRMVGRTPGNI+ Sbjct: 1 MFARDIGIDLGTANVLIHVKGKGIVLNEPSVVALDKNSGKVLAVGEEARRMVGRTPGNIV 60 Query: 61 TIRPLRDGVIADFAITEMMLKSFIDRVGGRSWYARPRILICAPTNITSVEQKSIREAAER 120 IRPL+DGVIADF +TE MLK FI+++ + +++PR+LIC PTNITSVEQK+I+EAAE+ Sbjct: 61 AIRPLKDGVIADFEVTEAMLKHFINKLNVKGLFSKPRMLICCPTNITSVEQKAIKEAAEK 120 Query: 121 SGAKEVFMEEEPKAAAIGAGMDIYQPSGNMVVDIGGGTTDVAVLSMGDVVTASSIKIAGD 180 SG K V++EEEPK AAIGAGM+I+QPSGNMVVDIGGGTTD+AV+SMGD+VT+SSIK+AGD Sbjct: 121 SGGKHVYLEEEPKVAAIGAGMEIFQPSGNMVVDIGGGTTDIAVISMGDIVTSSSIKMAGD 180 Query: 181 KFDEAXXXXXXXXXXXXXGERTAEDIKLNIGSVRPGGMKSEMDIRGRDMVSGLPQTLTIS 240 KFD GERTAEDIK+ + +V P E+ IRGRDMVSGLP+T+T++ Sbjct: 181 KFDMEILNYIKREYKLLIGERTAEDIKIKVATVFPDARHEEISIRGRDMVSGLPRTITVN 240 Query: 241 SGEVKEALWDPVSSIVAAAKSVLERTPPELSADIIDRGVVLTGGGALLNGLDELLSEELH 300 S EV+EAL + V+ IV AAK VLERTPPELSADIIDRGV++TGGGALLNGLD+LL+EEL Sbjct: 241 SKEVEEALRESVAVIVQAAKQVLERTPPELSADIIDRGVIITGGGALLNGLDQLLAEELK 300 Query: 301 VPVWVAEDPMHCVVKGTGIMLDHLDKNVKKKF 332 VPV VAE+PM CV GTG+MLD++DK K+K Sbjct: 301 VPVLVAENPMDCVAIGTGVMLDNMDKLPKRKL 332 >ref|NP_834944.1| Rod shape-determining protein mreB [Bacillus cereus ATCC 14579] gb|AAP12145.1| Rod shape-determining protein mreB [Bacillus cereus ATCC 14579] Length = 342 Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust. Identities = 224/332 (67%), Positives = 278/332 (83%) Query: 1 MLSKDIGIDLGTANVLIHVKGRGVVLDEPSVVTLESDTKKVLAVGEQARRMVGRTPGNIM 60 M ++DIGIDLGTANVLIHVKG+G+VL+EPSVV ++ ++ KVLAVGE+AR MVGRTPGNI+ Sbjct: 10 MFARDIGIDLGTANVLIHVKGKGIVLNEPSVVAIDRNSGKVLAVGEEARSMVGRTPGNIV 69 Query: 61 TIRPLRDGVIADFAITEMMLKSFIDRVGGRSWYARPRILICAPTNITSVEQKSIREAAER 120 IRPL+DGVIA+F ITE MLK FI+++ +S++++PRILIC PTNITSVEQK+IREAAER Sbjct: 70 AIRPLKDGVIANFEITEAMLKYFINKLDVKSFFSKPRILICCPTNITSVEQKAIREAAER 129 Query: 121 SGAKEVFMEEEPKAAAIGAGMDIYQPSGNMVVDIGGGTTDVAVLSMGDVVTASSIKIAGD 180 SG K VF+EEEPK AA+GAGM+I+QPSGNMVVDIGGGTTD+AVLSMGD+VT+SSIK+AGD Sbjct: 130 SGGKTVFLEEEPKVAAVGAGMEIFQPSGNMVVDIGGGTTDIAVLSMGDIVTSSSIKMAGD 189 Query: 181 KFDEAXXXXXXXXXXXXXGERTAEDIKLNIGSVRPGGMKSEMDIRGRDMVSGLPQTLTIS 240 KFD GERT+EDIK+ +G+V PG E++IRGRDMV+GLP+T+T+ Sbjct: 190 KFDMEILNYIKRKYKLLIGERTSEDIKIKVGTVFPGARSEELEIRGRDMVTGLPRTITVC 249 Query: 241 SGEVKEALWDPVSSIVAAAKSVLERTPPELSADIIDRGVVLTGGGALLNGLDELLSEELH 300 S E+ EAL + + IV AAK VLERTPPELSADIIDRGV+LTGGGALL+G+D LL+EEL Sbjct: 250 SEEITEALKENAAVIVQAAKGVLERTPPELSADIIDRGVILTGGGALLHGIDMLLAEELK 309 Query: 301 VPVWVAEDPMHCVVKGTGIMLDHLDKNVKKKF 332 VPV +AE+PMHCV GTGIML+++D+ K+ Sbjct: 310 VPVLIAENPMHCVAVGTGIMLENIDRLPKRAL 341 >ref|NP_244606.1| cell shape determining protein (MreB-like protein) [Bacillus halodurans] pir||C84117 cell shape determining protein (MreB-like protein) mbl [imported] - Bacillus halodurans (strain C-125) dbj|BAB07458.1| cell shape determining protein (MreB-like protein) [Bacillus halodurans] Length = 334 Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust. Identities = 223/331 (67%), Positives = 276/331 (83%) Query: 1 MLSKDIGIDLGTANVLIHVKGRGVVLDEPSVVTLESDTKKVLAVGEQARRMVGRTPGNIM 60 M +DIGIDLGTANVLI+VKG+G+VL+EPSVV +E+ T +VLAVG++A RMVGRTPGNI+ Sbjct: 1 MFGRDIGIDLGTANVLIYVKGKGIVLNEPSVVAVETSTNRVLAVGDEAFRMVGRTPGNIV 60 Query: 61 TIRPLRDGVIADFAITEMMLKSFIDRVGGRSWYARPRILICAPTNITSVEQKSIREAAER 120 +RPL+DGVIA+F +TE MLK F++++ +S +++PRILIC PTNITSVEQK+IR+AAE+ Sbjct: 61 AVRPLKDGVIANFELTESMLKHFLNKMKVKSAFSKPRILICCPTNITSVEQKAIRQAAEK 120 Query: 121 SGAKEVFMEEEPKAAAIGAGMDIYQPSGNMVVDIGGGTTDVAVLSMGDVVTASSIKIAGD 180 SG K V++EEEPK AAIGAGMDI+QPSGNMVVDIGGGTTDVAVLSMGD+VTASSIK+AGD Sbjct: 121 SGGKNVYLEEEPKVAAIGAGMDIFQPSGNMVVDIGGGTTDVAVLSMGDIVTASSIKVAGD 180 Query: 181 KFDEAXXXXXXXXXXXXXGERTAEDIKLNIGSVRPGGMKSEMDIRGRDMVSGLPQTLTIS 240 + D GERTAE+IK + +V P E+DIRGRDMVSGLP+T+T++ Sbjct: 181 RMDSEILNYVKKEYKLLIGERTAENIKKEVATVFPDARYEEIDIRGRDMVSGLPRTITVN 240 Query: 241 SGEVKEALWDPVSSIVAAAKSVLERTPPELSADIIDRGVVLTGGGALLNGLDELLSEELH 300 S E++EAL + VS IV A+K VLE+TPPELSADIIDRGV+LTGGGALL+G+D+LLSEEL Sbjct: 241 SKEIQEALAEAVSYIVQASKQVLEQTPPELSADIIDRGVILTGGGALLHGIDQLLSEELR 300 Query: 301 VPVWVAEDPMHCVVKGTGIMLDHLDKNVKKK 331 VPV VAEDPM CV KGTGI+L++LD+ KK Sbjct: 301 VPVLVAEDPMDCVAKGTGIILENLDRMSSKK 331 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.316 0.135 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 467,050,704 Number of extensions: 18930340 Number of successful extensions: 56608 Number of sequences better than 1.0e-05: 1122 Number of HSP's gapped: 56319 Number of HSP's successfully gapped: 1122 Length of query: 332 Length of database: 757,237,578 Length adjustment: 126 Effective length of query: 206 Effective length of database: 415,135,104 Effective search space: 85517831424 Effective search space used: 85517831424 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 126 (53.1 bits)