BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0317.0015.p (1645 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAO88279.1| endo-beta-N-acetylglucosaminidase [Bacillus circu... 225 8e-57 ref|NP_691723.1| hypothetical protein OB0802 [Oceanobacillus ihe... 173 3e-41 gb|EAJ41061.1| unknown [environmental sequence] 165 9e-39 gb|EAI60553.1| unknown [environmental sequence] 153 4e-35 ref|ZP_00088656.1| COG1409: Predicted phosphohydrolases [Azotoba... 153 4e-35 >gb|AAO88279.1| endo-beta-N-acetylglucosaminidase [Bacillus circulans] Length = 1936 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 129/351 (36%), Positives = 186/351 (52%), Gaps = 4/351 (1%) Query: 1292 IAITVDGELEELQLPGNAAELLGQASLTVNAANVSITIPSAVLAELRGKAGDGAFAGSKI 1351 + I V E+ LP AAEL Q + + V++ +PS +L +L + D + I Sbjct: 1590 VTIVVPAGATEIVLPPQAAELPQQHKVELKTDRVTLEVPSGLLKKLASRIADKDVS---I 1646 Query: 1352 SLKATAVPXXXXXXXXXXXXXXXXXELQAVGVVREWSLSIVTEQGRSFGLGQFSQPVTIA 1411 SLKA + + G V ++ LS G L +F QP+TI+ Sbjct: 1647 SLKAAPLTAAQAKDAISKNKSVSPSAITLAGGVYDFKLSAAGANGSYAELSEFDQPITIS 1706 Query: 1412 YEVNANVDRSLLGLYYLSDDGRLEYAGGQWVDGKWAAAVSHFSKYAVLQYDKTFADLPAS 1471 ++ + V+ +G+YY+S +G+L+Y GG++ DG+ AA V+HFS+YAVL+ K F D+PA Sbjct: 1707 LKIESGVNPEQVGIYYISGNGKLDYIGGEYRDGELAAEVTHFSQYAVLKVVKVFDDVPAG 1766 Query: 1472 HWXXXXXXXXXXXXXXXGTSAGRYEPSRAITRAEFTAMLVRALGLSGKASSAFADVRADK 1531 HW GTS +EP R +TRAEFTA+L RAL L+ + FADV+A Sbjct: 1767 HWAEGVISKLTSRLMVDGTSETTFEPERVVTRAEFTALLARALKLTAGGTPTFADVKAGD 1826 Query: 1532 WYAGPVGLAVQAGIATGQSAAKFAPDEAISRQEMAAMLVXXXXXXXXXXXXXXXXXXXFT 1591 WYA V AV+AGIA G+SA +F P I+R+EM M + FT Sbjct: 1827 WYADAVTAAVEAGIAEGKSAGQFEPQARITREEMVVMTM-RAYNKAKDKGPSTGVEASFT 1885 Query: 1592 DISQAPQWARQAIGEASALGLMQGRGQEQFAPQEQGTRAESAQMLLNLLDK 1642 D +Q WA + + A+AL L+QGR Q +F PQ TRAE+ Q++ N+L K Sbjct: 1886 DENQISAWAVEQVKAAAALQLIQGRAQGKFEPQGTATRAEAVQVIFNMLLK 1936 >ref|NP_691723.1| hypothetical protein OB0802 [Oceanobacillus iheyensis HTE831] dbj|BAC12758.1| hypothetical protein [Oceanobacillus iheyensis HTE831] Length = 542 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 134/434 (30%), Positives = 199/434 (45%), Gaps = 30/434 (6%) Query: 557 AVKDGLYSP-VMTFKVAPYDGTAAPRNVNVTMGADTATSRQFTWQTDPNTTDSVVELIKQ 615 AV D P T+K +P P V + DTAT++ +W+TD + T V E+ Sbjct: 36 AVADQQEHPDAETYKPSP-----VPDRVLLGWEGDTATTQSVSWRTDESVTSPVAEIAVA 90 Query: 616 AEFTGFEEGKGLRIEGSSYIYNTNNDGTMRVHKAEATGLAPGTKYVYRVGDGKGNASSQG 675 E F +S N T + H GL P T+Y+YRVGDG N S Sbjct: 91 EEGPNFTSNTSTIEAETSEEIEANLGYTSQYHTVNFEGLEPDTQYLYRVGDG-ANWSEWY 149 Query: 676 TFTTDGGGRESTKFLFIGDSQADSKAGFGLWGTTLQKAFEYMPDAEMLVHAGDMVDKGFE 735 FTT E F+++GD+Q D K W ++ A+ + +A +VHAGDM++ G Sbjct: 150 EFTTASEEDEPFSFIYMGDAQNDIKEH---WSRVMRSAYSDLSEASFIVHAGDMINHGDA 206 Query: 736 QEQWNWWFEAAQPQLLNTTLVPII---GNHEVM----GTNGDGDYLA-QFNNPQNGADSV 787 EQW W+E+A +N ++P I GNHE G N +Y QF P NG + + Sbjct: 207 DEQWGEWYESA--GWIN-GMIPSIATAGNHEYYRITNGPNTLSEYFGPQFAYPGNGPEGL 263 Query: 788 KGSNYSFDLQDTHFVVMNTEHGAAEMTEQAEWLDRDLTASDKKWTVVFFHQGPY--GSIY 845 + +D QD + +++ G ++ +QAEWLD L + KWTV+ FH + G Sbjct: 264 EEQVGYWDYQDMRIISLDSNTGHVDIDQQAEWLDEVLENNPNKWTVITFHHPIFSSGEGR 323 Query: 846 SNERVQATWVPVFDKHKVDLVMNGHDHIYLR-TFPMKDGKQVSDGQGTRYVIGGSSGPKF 904 N ++ +PV +KH VDL+ GHDH Y R ++ + GT +V SGPK Sbjct: 324 DNVALREAVLPVIEKHNVDLIFQGHDHTYARGHLSNEEDGEKEYSTGTMFV-NSVSGPKM 382 Query: 905 YALTERFWQE-----KIYDEDEQIFTAVEIKDRELTVVARTVAGAEIDRLVIAKAPPESV 959 Y +E W+E + ED Q++ + + EL + G D + K Sbjct: 383 YNRSEVVWEENNAYVRSGAEDTQMYQHIYVDGDELKYESYNALGEIYDEFTMTKQSDGQK 442 Query: 960 TLDRTAVDMEPGQS 973 + T EP +S Sbjct: 443 IITETEGSEEPVES 456 >gb|EAJ41061.1| unknown [environmental sequence] Length = 410 Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 118/397 (29%), Positives = 180/397 (45%), Gaps = 30/397 (7%) Query: 580 PRNVNVTMGADTATSRQFTWQTDPNTTDSVVELIKQAEFTGF-EEGKGLRIEGSSY---I 635 P + + D +T R TW+TD + ++ ++ + F + K + + + + Sbjct: 11 PDRIILNFNGDPSTKRAVTWRTDLSVKNAKAQIAVAGVNSKFAKNAKTYKAKTEEFDLGL 70 Query: 636 YNTNNDGTMRVHKAEATGLAPGTKYVYRVGDGKGNASSQGTFTTDGGGRESTKFLFIGDS 695 Y NN ++ H L P T Y YRVGDG N S F T ST+F++ GD+ Sbjct: 71 YKANNSFVVKYHSVVFEELNPNTTYAYRVGDG-DNWSEWIQFKTANADYNSTQFVYFGDA 129 Query: 696 QADSKAGFGLWGTTLQKAFEYMPDAEMLVHAGDMVDKGFEQEQWNWWFEAAQPQLLNTTL 755 Q D W ++ A++ P+A ++HAGDMVD +W WF+A T Sbjct: 130 QNDI---LSHWSRVIRMAYQTAPNASFVIHAGDMVDTAHRDYEWAQWFKAGGFIHRQWTT 186 Query: 756 VPIIGNHEVMGTNGDG------DYLAQFNNP-QNGADS-VKGSNYSFDLQDTHFVVMNTE 807 +P++GNHE T+ + QF P + G DS + + Y+ + QD +V+N+ Sbjct: 187 IPVVGNHEFQSTSRSTPKRVSIQWRPQFTLPVEEGLDSKLHETVYTVNYQDVLILVLNS- 245 Query: 808 HGAAEMTEQAEWLDRDLTASDKKWTVVFFHQGPYGSIYSN--ERVQATWVPVFDKHKVDL 865 + +Q E++ L+ SD KW +V H + E + W P+FDK+ VDL Sbjct: 246 --TDFLEKQTEYIQEILSNSDAKWKIVTCHHSVFSPAQGRDFEYARKNWKPLFDKYGVDL 303 Query: 866 VMNGHDHIYLR-TFPMKDGKQVSDGQGTRYVIGGSSGPKFYAL---TERFWQEKIYDEDE 921 V+NGHDH Y R P+K I SGPK Y + + +Q Y D+ Sbjct: 304 VLNGHDHTYARGHIPIKTTDNNKSSNFNTLYITSVSGPKQYKIGLEQIKNYQSDGYKNDK 363 Query: 922 -----QIFTAVEIKDRELTVVARTVAGAEIDRLVIAK 953 Q F + I + LT A TV G E D +I K Sbjct: 364 LGEQTQFFQVISINEETLTYKAYTVLGDEYDTAIITK 400 >gb|EAI60553.1| unknown [environmental sequence] Length = 367 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 108/340 (31%), Positives = 160/340 (47%), Gaps = 38/340 (11%) Query: 640 NDGTMRVHKAEATGLAPGTKYVYRVGDGKGNASSQGTFTTDGGGRESTKFLFIGDSQADS 699 N H T L P T Y YRVGDGK + S FTT E FL++GD+Q Sbjct: 29 NSLNHNYHSVTFTDLEPNTTYAYRVGDGK-HWSEWIQFTTAYKTNEPFSFLYVGDAQ--- 84 Query: 700 KAGFGLWGTTLQKAFEYMPDAEMLVHAGDMVDKGFEQEQWNWWFEAAQPQLLNTTL--VP 757 + LW +++ ++ P+A ++HAGD+VD +E+W+ WF A ++ TL + Sbjct: 85 NYIYDLWSRLIREGYKKAPEASFILHAGDLVDDAHNEEEWHEWFAAG--GWIHRTLPSLA 142 Query: 758 IIGNHE----------VMGTNGDGDYLAQFNNPQNGADSVKGSNYSFDLQDTHFVVMNTE 807 + GNHE + + QF P NG + +NY D Q F+ +N+ Sbjct: 143 VPGNHEYRPLYQKDIPIRKKTLSIQWNHQFTLPNNGVSGLLETNYFLDYQGVRFIALNSN 202 Query: 808 HGAAEMTEQAEWLDRDLTASDKKWTVVFFHQGPYGSI----YSNERVQATWVPVFDKHKV 863 ++ EQ EWL+ L + KWT+ FFH Y + Y R + W P+FDK+ V Sbjct: 203 ---VKIEEQTEWLETVLKNNPHKWTIAFFHHPLYSATTKRDYPERRKR--WKPLFDKYGV 257 Query: 864 DLVMNGHDHIYLR---TFPMKD---GKQVSDGQGTRYVIGGSSGPKFYALTERF--WQEK 915 DL + GHDH Y R + K+ G V D GT YV+ SGPK Y + ++ Sbjct: 258 DLALQGHDHAYARGSESLYEKNLITGTNVKDATGTVYVV-SVSGPKHYDAKPDWDQYEPT 316 Query: 916 IYD--EDEQIFTAVEIKDRELTVVARTVAGAEIDRLVIAK 953 Y E++Q+F + I +L+ + T G D + K Sbjct: 317 RYKAGENKQLFQVISIDGNKLSYKSYTAIGDLFDSFELIK 356 >ref|ZP_00088656.1| COG1409: Predicted phosphohydrolases [Azotobacter vinelandii] Length = 474 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 125/403 (31%), Positives = 184/403 (45%), Gaps = 38/403 (9%) Query: 572 APYDGTAAPRNVNVTMGADTATSRQFTWQTDPNTTDSVVELIKQAEFTGFE-EGKGLRIE 630 A Y T P + +T GAD A ++TD + +V E+ G + E + + Sbjct: 37 AAYAATGLPDRIVLTPGADPARELAVAYRTD--SRQAVAEVQLAPALDGPDPEARARPLG 94 Query: 631 GSSYIYNTNNDGTMRVHKAEATGLAPGTKYVYRVGDGKGNASSQGTFTTDGGGRESTKFL 690 GSS ++ T N G H+ TGL P T Y+YR G S F T G + +F+ Sbjct: 95 GSSRLFATEN-GDAYYHRVRFTGLQPDTAYLYRA-KGADGWSEWLQFHTAAAGFKPFRFI 152 Query: 691 FIGDSQADSKAGFGLWGTTLQKAFEYMPDAEMLVHAGDMVDKG---FEQEQWNWWFEAAQ 747 ++GD Q D L T+++AF ++VHAGDMV + ++W W +A Sbjct: 153 YLGDVQDDI---LTLGSRTIRQAFLSTASPALVVHAGDMVSQDKTLIHDDEWGEWNQAGG 209 Query: 748 PQLLNTTLVPIIGNHEVMGT----NGDG-----DYLAQFNNPQNGADSVKGSNYSFDLQD 798 +P IGNHE + T G G + QF P NGA V+G++Y D Q Sbjct: 210 FYYAQVPQLPAIGNHEYLKTWNPLEGKGRRRSPHWPLQFVLPDNGAHGVEGTSYYVDFQG 269 Query: 799 THFVVMN----TEHGAAEMTEQAEWLDRDLTASDKKWTVVFFHQGPYGSIY--SNERVQA 852 F+V++ GA E Q +WL+ L S +W VV HQ + +E ++A Sbjct: 270 VRFIVLDGTAALHLGALE--SQKQWLEASLRDSSARWNVVIDHQPIFTCARPKDSEVLKA 327 Query: 853 TWVPVFDKHKVDLVMNGHDHIYLRTFPMKDGKQVSDG-------QGTRYVIGGSSGPKFY 905 W PV +K+ VDLV+ GHDH Y R + G + + QG Y++ +G K Y Sbjct: 328 AWKPVLEKYNVDLVLQGHDHCYSR-LSAEAGHEAALAARAAGAVQGPVYLV-SVAGSKMY 385 Query: 906 ALTER-FWQEKIYDEDEQIFTAVEIKDRELTVVARTVAGAEID 947 L +R Q ED Q + VE++ + L V T +G D Sbjct: 386 RLNDRARRQPDRVAEDTQFYETVEVESQRLAVRTYTASGRLYD 428 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.313 0.130 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 2,243,872,511 Number of extensions: 94741739 Number of successful extensions: 181715 Number of sequences better than 1.0e-05: 286 Number of HSP's gapped: 181277 Number of HSP's successfully gapped: 327 Length of query: 1645 Length of database: 757,237,578 Length adjustment: 139 Effective length of query: 1506 Effective length of database: 379,838,817 Effective search space: 572037258402 Effective search space used: 572037258402 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 133 (55.8 bits)