BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0311.0021.p
         (161 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAB39104.1| unknown [environmental sequence]                       109   2e-23
gb|EAB45598.1| unknown [environmental sequence]                        98   7e-20

>gb|EAB39104.1| unknown [environmental sequence]
          Length = 123

 Score =  109 bits (273), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 77/120 (64%), Gaps = 1/120 (0%)

Query: 35  MSRDELVHEIQHGVVFWGFEDNGELCGVMGIQDKGEVSLIRHAYVRTAQRQGGIGSKLLK 94
           M+  EL++E  +GV  +G+ DN +L GV+G+Q+   V LIRHAY  T+ +  GIGS LL+
Sbjct: 1   MTEKELINEFNNGVNMYGYHDNNKLIGVIGMQEVKGVILIRHAYTLTSHQGKGIGSILLE 60

Query: 95  HLIERTSK-PILIGTWEAAEWAISFYIKNGFKLVPAGEKRNLLSKYWNIPERQIETSVVL 153
           +L+ +     +L+GTW+ A WAI FY K GF +    EK  LL KYW IP  QI  SVVL
Sbjct: 61  YLLNKNKNFRLLVGTWKNAAWAIRFYEKFGFVIQSEDEKTLLLKKYWQIPSEQIINSVVL 120


>gb|EAB45598.1| unknown [environmental sequence]
          Length = 115

 Score = 97.8 bits (242), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 72/112 (64%), Gaps = 1/112 (0%)

Query: 43  EIQHGVVFWGFEDNGELCGVMGIQDKGEVSLIRHAYVRTAQRQGGIGSKLLKHLIERTSK 102
           E+ +GV  +G+  N +L GV+GIQ   +V LIRHAY  T+ +  G+GS LL++L+++   
Sbjct: 1   ELNNGVRMYGYYHNNKLIGVIGIQKVKDVILIRHAYTLTSLQGKGMGSALLEYLLKKNQN 60

Query: 103 P-ILIGTWEAAEWAISFYIKNGFKLVPAGEKRNLLSKYWNIPERQIETSVVL 153
             +L+GTW  A WA+ FY K  F L    +   LL+KYW IP +QI+ SVVL
Sbjct: 61  SRLLVGTWNNATWAVRFYKKFDFILHTKEQSTLLLNKYWKIPPKQIKNSVVL 112


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.319    0.139    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 258,793,892
Number of extensions: 10531784
Number of successful extensions: 22024
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 22034
Number of HSP's successfully gapped: 2
Length of query: 161
Length of database: 757,237,578
Length adjustment: 116
Effective length of query: 45
Effective length of database: 442,286,094
Effective search space: 19902874230
Effective search space used: 19902874230
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 120 (50.8 bits)