BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0303.0019.p (387 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00183920.1| hypothetical protein Exigu068801 [Exiguobacte... 489 e-137 ref|NP_241953.1| glucose-1-phosphate adenylyltransferase [Bacill... 486 e-136 sp|O08326|GLGC_BACST Glucose-1-phosphate adenylyltransferase (AD... 480 e-134 ref|NP_658901.1| NTP_transferase, Nucleotidyl transferase [Bacil... 478 e-134 ref|NP_981320.1| glucose-1-phosphate adenylyltransferase [Bacill... 477 e-133 >ref|ZP_00183920.1| hypothetical protein Exigu068801 [Exiguobacterium sp. 255-15] Length = 386 Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust. Identities = 222/360 (61%), Positives = 287/360 (79%) Query: 1 MKKKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQ 60 M KK +VAMLLAGG+GKRL LTK AKPAV FGG YRIIDFPLSNC+NSGIDTVGVLTQ Sbjct: 1 MAKKNVVAMLLAGGEGKRLGALTKHTAKPAVAFGGKYRIIDFPLSNCTNSGIDTVGVLTQ 60 Query: 61 YEPLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPE 120 YEPL L+ Y+G+GS WDL+R++GG+ +LPP++ +NG +WY GTA+AIYRN+ +++Q+DP+ Sbjct: 61 YEPLELNRYLGIGSAWDLDRRNGGLTILPPYQAQNGKNWYEGTANAIYRNMSYINQYDPD 120 Query: 121 HVLILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDE 180 +VL+LSGDHIYKMDY M++ H+ AD TISV +VP EEA RFGILNT+EDL+I EF+E Sbjct: 121 YVLVLSGDHIYKMDYEKMIEEHRQGGADVTISVREVPWEEAPRFGILNTDEDLRINEFEE 180 Query: 181 KPAKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPFE 240 KP PKS LASMG+Y+F W+VL++HL++D ++ SS DFGK+IIP ML + ++ AY F+ Sbjct: 181 KPENPKSNLASMGIYVFNWDVLKRHLIQDAGDAESSFDFGKNIIPNMLYENLNIRAYKFK 240 Query: 241 GYWRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINE 300 GYW+DVGT+ SLWEANMDLL P +L +P W++ + NPNQ QY+ A + IINE Sbjct: 241 GYWKDVGTIQSLWEANMDLLEADPEFDLYEPSWKVHSVNPNQQPQYIGNNASIETSIINE 300 Query: 301 GCIVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIG 360 GC + GE+ HSVLFYGV+V EGS++ DSVI P VKIGK+V IH+AI+++ V+ED IG Sbjct: 301 GCHIEGEINHSVLFYGVDVAEGSLVKDSVIFPNVKIGKDVTIHRAILADGVVVEDGATIG 360 >ref|NP_241953.1| glucose-1-phosphate adenylyltransferase [Bacillus halodurans] sp|Q9KDX4|GLGC_BACHD Glucose-1-phosphate adenylyltransferase (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) pir||G83785 glucose-1-phosphate adenylyltransferase glgC [imported] - Bacillus halodurans (strain C-125) dbj|BAB04806.1| glucose-1-phosphate adenylyltransferase [Bacillus halodurans] Length = 383 Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust. Identities = 230/382 (60%), Positives = 290/382 (75%), Gaps = 2/382 (0%) Query: 3 KKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQYE 62 KKE+V MLLAGG+GKRL LT+ LAKPAVYFGG YRIIDFPLSNC+NSGIDTVGVLTQYE Sbjct: 2 KKEIVGMLLAGGEGKRLGQLTRKLAKPAVYFGGKYRIIDFPLSNCTNSGIDTVGVLTQYE 61 Query: 63 PLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPEHV 122 PL L+ +IG+GS WDL+R+ GGV VLPP+ + G SWY+GTADAIY+N +++Q+DPE+V Sbjct: 62 PLALNGHIGIGSPWDLDRRHGGVTVLPPYIEKQGGSWYKGTADAIYQNRYYIEQYDPEYV 121 Query: 123 LILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDEKP 182 LILSGDHIYKMDY M+ +HK AD TISVI+VP EEASRFGI+NT E++ I +F+EKP Sbjct: 122 LILSGDHIYKMDYDRMISHHKKLGADATISVIEVPWEEASRFGIMNTNEEMTITQFEEKP 181 Query: 183 AKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPFEGY 242 P S LASMG+YIF W VL+ +L++D + + SSHDFGKDIIP MLA L AYPFEGY Sbjct: 182 TTPISNLASMGIYIFNWSVLKSYLIQDAKQANSSHDFGKDIIPKMLAKDLKLVAYPFEGY 241 Query: 243 WRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINEGC 302 W+DVGT+ S WEANMDLL + L LNDP WRI++ N NQP QY++ A V ++NEGC Sbjct: 242 WKDVGTIKSYWEANMDLLDEHSSLMLNDPSWRIYSVNRNQPPQYISTRAYVRCSLVNEGC 301 Query: 303 IVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIGIE 362 +VHG V+ S+LF GV +G S + +SV+MP VK+G+NV + + II E I + Sbjct: 302 VVHGNVEQSILFPGVHIGANSSVFESVLMPNVKVGENVVLRRTIIMEGACIPSGTHLA-- 359 Query: 363 RENEDEILLIDNRSKKRQSVAA 384 + D+IL+ID ++ S+AA Sbjct: 360 PSDPDDILVIDKDTEFSPSIAA 381 >sp|O08326|GLGC_BACST Glucose-1-phosphate adenylyltransferase (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) dbj|BAA19589.1| subunit of ADP-glucose pyrophosphorylase [Geobacillus stearothermophilus] Length = 387 Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust. Identities = 217/370 (58%), Positives = 294/370 (79%), Gaps = 2/370 (0%) Query: 3 KKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQYE 62 KK+ +AMLLAGGQG RL+ LT ++AKPAV FGG YRIIDF LSNC+NSGIDTVGVLTQY+ Sbjct: 2 KKKCIAMLLAGGQGSRLRSLTTNIAKPAVPFGGKYRIIDFTLSNCTNSGIDTVGVLTQYQ 61 Query: 63 PLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPEHV 122 PL+LHSYIG+GS WDL+R++GGV VLPP+ +G WY GTA+A+Y+N+ +++Q++P++V Sbjct: 62 PLLLHSYIGIGSAWDLDRRNGGVTVLPPYSVSSGVKWYEGTANAVYQNINYIEQYNPDYV 121 Query: 123 LILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDEKP 182 L+LSGDHIYKMDY ML YH A+ AD TISVI+VP EEASRFGI+NT E+++I EF EKP Sbjct: 122 LVLSGDHIYKMDYQHMLDYHIAKQADVTISVIEVPWEEASRFGIMNTNEEMEIVEFAEKP 181 Query: 183 AKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPFEGY 242 A+PKS LASMG+YIF W +L+++L D N SSHDFGKD+IP++L + + +AYPFEGY Sbjct: 182 AEPKSNLASMGIYIFNWPLLKQYLQIDNANPHSSHDFGKDVIPMLLREKKRPFAYPFEGY 241 Query: 243 WRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINEGC 302 W+DVGTV SLWEANMDLL + L+L D WRI++ NPNQP QY++P A+VS ++NEGC Sbjct: 242 WKDVGTVKSLWEANMDLLDENNELDLFDRSWRIYSVNPNQPPQYISPEAEVSDSLVNEGC 301 Query: 303 IVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIGIE 362 +V G V+ SVLF GV +G+G+V+ +SVIMP + + + +AI++ +++I + + Sbjct: 302 VVEGTVERSVLFQGVRIGKGAVVKESVIMPGAAVSEGAYVERAIVTPDSIIPPHSSVC-- 359 Query: 363 RENEDEILLI 372 E+ D+++L+ Sbjct: 360 PEDADDVVLV 369 >ref|NP_658901.1| NTP_transferase, Nucleotidyl transferase [Bacillus anthracis A2012] ref|NP_847308.1| glucose-1-phosphate adenylyltransferase [Bacillus anthracis str. Ames] gb|AAP28794.1| glucose-1-phosphate adenylyltransferase [Bacillus anthracis str. Ames] Length = 376 Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust. Identities = 231/374 (61%), Positives = 293/374 (78%) Query: 2 KKKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQY 61 +K++ VAMLLAGG+G RL LTK+LAKPAV FGG YRIIDF LSNC+NSGI+TVG+LTQY Sbjct: 3 QKQKCVAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQY 62 Query: 62 EPLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPEH 121 +PL LH+YIG+G+ WDL+R GGV VLPP+ +G WY GTA AIY+NL ++ Q++PE+ Sbjct: 63 QPLELHNYIGIGNAWDLDRVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEY 122 Query: 122 VLILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDEK 181 VLILSGDHIYKMDY ML YH + AD +ISVI+VP +EASRFGI+NT E+++I EF+EK Sbjct: 123 VLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDEASRFGIMNTNEEMEIVEFEEK 182 Query: 182 PAKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPFEG 241 P P+S LASMG+YIF W +L+++L D N SS+DFGKD++PL+L +G+ L AYPFEG Sbjct: 183 PQFPRSNLASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEG 242 Query: 242 YWRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINEG 301 YW+DVGTV SLWEANMDLL D LNLND DWRI++ NPN+P QY+A AKV +INEG Sbjct: 243 YWKDVGTVKSLWEANMDLLRDETSLNLNDRDWRIYSVNPNEPPQYIAEKAKVEESLINEG 302 Query: 302 CIVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIGI 361 C++ G+VKHSVLF GV V EGS++ DSV+MP KIGKNV I +AI+ VIED I Sbjct: 303 CVIEGDVKHSVLFQGVTVEEGSMVIDSVVMPGAKIGKNVVIERAIVGSEMVIEDGTIIRP 362 Query: 362 ERENEDEILLIDNR 375 E+ +D +L+ + + Sbjct: 363 EKNVDDVVLIAEGK 376 >ref|NP_981320.1| glucose-1-phosphate adenylyltransferase [Bacillus cereus ATCC 10987] gb|AAS43928.1| glucose-1-phosphate adenylyltransferase [Bacillus cereus ATCC 10987] Length = 376 Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust. Identities = 230/374 (61%), Positives = 293/374 (78%) Query: 2 KKKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQY 61 +K++ VAMLLAGG+G RL LTK+LAKPAV FGG YRIIDF LSNC+NSGI+TVG+LTQY Sbjct: 3 QKQKCVAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQY 62 Query: 62 EPLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPEH 121 +PL LH+YIG+G+ WDL+R GGV VLPP+ +G WY GTA AIY+NL ++ Q++PE+ Sbjct: 63 QPLELHNYIGIGNAWDLDRVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEY 122 Query: 122 VLILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDEK 181 VLILSGDHIYKMDY ML YH + AD +ISVI+VP +EASRFGI+NT E+++I EF+EK Sbjct: 123 VLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDEASRFGIMNTNEEMEIVEFEEK 182 Query: 182 PAKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPFEG 241 P P+S LASMG+YIF W +L+++L D N SS+DFGKD++PL+L +G+ L AYPFEG Sbjct: 183 PQFPRSNLASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEG 242 Query: 242 YWRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINEG 301 YW+DVGTV SLWEANMDLL D LNLND +WRI++ NPN+P QY+A AKV +INEG Sbjct: 243 YWKDVGTVKSLWEANMDLLRDETSLNLNDRNWRIYSVNPNEPPQYIAEKAKVEESLINEG 302 Query: 302 CIVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIGI 361 C++ G+VKHSVLF GV V EGS++ DSV+MP KIGKNV I +AI+ VIED I Sbjct: 303 CVIEGDVKHSVLFQGVTVEEGSMVIDSVVMPGAKIGKNVVIERAIVGSEMVIEDGTIIRP 362 Query: 362 ERENEDEILLIDNR 375 E+ +D +L+ + + Sbjct: 363 EKNVDDVVLIAEGK 376 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.137 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 628,163,648 Number of extensions: 28483726 Number of successful extensions: 69295 Number of sequences better than 1.0e-05: 702 Number of HSP's gapped: 67743 Number of HSP's successfully gapped: 714 Length of query: 387 Length of database: 757,237,578 Length adjustment: 127 Effective length of query: 260 Effective length of database: 412,420,005 Effective search space: 107229201300 Effective search space used: 107229201300 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 127 (53.5 bits)