BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0303.0014.p (183 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P05332|YP20_BACLI HYPOTHETICAL P20 PROTEIN >gi|80106|pir||S00... 121 9e-27 ref|NP_832026.1| Ribosomal-protein-alanine acetyltransferase [Ba... 120 2e-26 ref|NP_832118.1| Ribosomal-protein-alanine acetyltransferase [Ba... 109 3e-23 ref|XP_307363.1| ENSANGP00000002006 [Anopheles gambiae] >gi|2129... 108 4e-23 ref|NP_241565.1| ribosomal-protein-alanine N-acetyltransferase [... 106 3e-22 >sp|P05332|YP20_BACLI HYPOTHETICAL P20 PROTEIN pir||S00875 hypothetical protein P20 - Bacillus licheniformis emb|CAA30415.1| unnamed protein product [Bacillus licheniformis] Length = 178 Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 63/171 (36%), Positives = 100/171 (58%), Gaps = 2/171 (1%) Query: 11 LPGKKVKLRPLEAGHAAALYSVWSHPQVNRWLAAPLLSSPEEAEQLIAVLLQMSREEESL 70 L +++ LR +E A L WS P+V +++ + +A +I ++ +S E ++ Sbjct: 4 LYTERLTLRKMELEDADVLCQYWSDPEVTKYMNITPFTDVSQARDMIQMINDLSLEGQAN 63 Query: 71 RWSIIGPEGG-VIGSCGYNSWQLQGAYRGEIGCELLPDYWGLGYMREALELLLDYGFAVM 129 R+SII E VIG+CG+N + R EIG +L ++WG G+ EA++ L+DYGF + Sbjct: 64 RFSIIVKETDEVIGTCGFNMIDQENG-RAEIGYDLGRNHWGKGFASEAVQKLIDYGFTSL 122 Query: 130 GLNRIEAFCHPDNLRAQRLFQSLGFQREGLLREYRHTDAGFQDVVLYALLR 180 LNRIEA P+N + +L SL FQ+EGLLR+Y DV +++LL+ Sbjct: 123 NLNRIEAKVEPENTPSIKLLNSLSFQKEGLLRDYEKAKGRLIDVYMFSLLK 173 >ref|NP_832026.1| Ribosomal-protein-alanine acetyltransferase [Bacillus cereus ATCC 14579] gb|AAP09227.1| Ribosomal-protein-alanine acetyltransferase [Bacillus cereus ATCC 14579] Length = 176 Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 102/174 (58%), Gaps = 2/174 (1%) Query: 7 VIPDLPGKKVKLRPLEAGHAAALYSVWSHPQVNRWLAAPLLSSPEEAEQLIAVLLQMSRE 66 +I +L +++ LR ++A + +++ +WS P V +++ + +A+ +I L ++++ Sbjct: 1 MITELHSQRLYLRKMKASDSLSMFKIWSDPDVTKFMNISNFTDENQAKDMIQFLNELAQN 60 Query: 67 EESLRWSIIGPEGG-VIGSCGYNSWQLQGAYRGEIGCELLPDYWGLGYMREALELLLDYG 125 +++R++II E +IGSCGYNS + + + EIG ++ +WG GY EA+ LLDY Sbjct: 61 NKAIRFTIIEKESNHIIGSCGYNSLDFENS-KTEIGYDISKTFWGKGYAPEAISSLLDYA 119 Query: 126 FAVMGLNRIEAFCHPDNLRAQRLFQSLGFQREGLLREYRHTDAGFQDVVLYALL 179 F + LNR+EA P N+ + ++ + L F EG LR+ + D+ +Y+ L Sbjct: 120 FTHLKLNRVEAKVEPANVNSIKVLEKLNFTFEGTLRKSEKSAGKLIDLNIYSKL 173 >ref|NP_832118.1| Ribosomal-protein-alanine acetyltransferase [Bacillus cereus ATCC 14579] gb|AAP09319.1| Ribosomal-protein-alanine acetyltransferase [Bacillus cereus ATCC 14579] Length = 183 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 97/174 (55%), Gaps = 2/174 (1%) Query: 8 IPDLPGKKVKLRPLEAGHAAALYSVWSHPQVNRWLAAPLLSSPEEAEQLIAVLLQMSREE 67 P L ++++L +E + +Y ++S +V + + +A ++I + E+ Sbjct: 3 FPILETERLRLVEIEQSYCQKIYEIFSLDEVTCYYGMNSFTEFGQASRMIESFSKNYFEK 62 Query: 68 ESLRWSIIGPEGGV-IGSCGYNSWQLQGAYRGEIGCELLPDYWGLGYMREALELLLDYGF 126 +++RW I+ E V IG+ G N+ QL R EIG +L P YWG GY EA ++DYGF Sbjct: 63 KAIRWGIVLKETNVLIGTIGLNNLQLWSK-RSEIGYDLHPRYWGNGYASEAAREIIDYGF 121 Query: 127 AVMGLNRIEAFCHPDNLRAQRLFQSLGFQREGLLREYRHTDAGFQDVVLYALLR 180 +GL RI A +P+N + R+ +GFQ+EGLLR Y H D +LY+++R Sbjct: 122 KDLGLFRIGAITYPENDTSCRMLSKIGFQKEGLLRGYIHQGNKQHDALLYSIVR 175 >ref|XP_307363.1| ENSANGP00000002006 [Anopheles gambiae] gb|EAA03104.1| ENSANGP00000002006 [Anopheles gambiae str. PEST] Length = 178 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 95/173 (54%), Gaps = 2/173 (1%) Query: 8 IPDLPGKKVKLRPLEAGHAAALYSVWSHPQVNRWLAAPLLSSPEEAEQLIAVLLQMSREE 67 P L +++ LR L A ++ +S +V + +EAE LI + + Sbjct: 7 FPVLETERLILRQLTLADAEDMFEYFSKDEVTEYYDLYTFKGIDEAEALIQDFNKNFENK 66 Query: 68 ESLRWSI-IGPEGGVIGSCGYNSWQLQGAYRGEIGCELLPDYWGLGYMREALELLLDYGF 126 + +RW+I + G +IG+CGY++W + ++ E+G EL P YW YM EA+ +L Y F Sbjct: 67 KGIRWAIQLKDSGKMIGTCGYHNWAHEH-FKIELGYELNPLYWRQHYMEEAIAAILPYAF 125 Query: 127 AVMGLNRIEAFCHPDNLRAQRLFQSLGFQREGLLREYRHTDAGFQDVVLYALL 179 + M ++R+EAF PDNL ++RL L F+ EGLL+++ F D ++ L+ Sbjct: 126 SEMNIHRVEAFTDPDNLASERLLLKLNFKEEGLLKDFFFEKGRFVDAKIFGLV 178 >ref|NP_241565.1| ribosomal-protein-alanine N-acetyltransferase [Bacillus halodurans] pir||C83737 ribosomal-protein-alanine N-acetyltransferase BH0699 [imported] - Bacillus halodurans (strain C-125) dbj|BAB04418.1| ribosomal-protein-alanine N-acetyltransferase [Bacillus halodurans] Length = 190 Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 2/174 (1%) Query: 8 IPDLPGKKVKLRPLEAGHAAALYSVWSHPQVNRWLAAPLLSSPEEAEQLIAVLLQMSREE 67 P L K++ LR + A ++ S S +V ++ + E+A IA + E+ Sbjct: 8 FPILETKRLILRKITTDDARSILSYLSDKEVMKYFGLEPFQTLEDALGEIAWYESILHEQ 67 Query: 68 ESLRWSI-IGPEGGVIGSCGYNSWQLQGAYRGEIGCELLPDYWGLGYMREALELLLDYGF 126 +RW I + + VIGSCG++ W + +R EIG EL YWG G EA+ ++ YGF Sbjct: 68 TGIRWGITLKGQDEVIGSCGFHQW-VPKHHRAEIGFELSKLYWGQGIASEAIRAVIQYGF 126 Query: 127 AVMGLNRIEAFCHPDNLRAQRLFQSLGFQREGLLREYRHTDAGFQDVVLYALLR 180 + L RI+A P N+ +QRL + GF EGLLR Y +T F D+ +Y+LL+ Sbjct: 127 EHLELQRIQALIEPPNIPSQRLVEKQGFISEGLLRSYEYTCGKFDDLYMYSLLK 180 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.322 0.141 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 292,751,561 Number of extensions: 11804518 Number of successful extensions: 24778 Number of sequences better than 1.0e-05: 216 Number of HSP's gapped: 24789 Number of HSP's successfully gapped: 216 Length of query: 183 Length of database: 757,237,578 Length adjustment: 118 Effective length of query: 65 Effective length of database: 436,855,896 Effective search space: 28395633240 Effective search space used: 28395633240 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 122 (51.6 bits)