BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0298.0001.p
         (122 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD32741.1| MmcQ [Streptomyces lavendulae]                         112   3e-24
gb|EAK28679.1| unknown [environmental sequence]                       106   2e-22
gb|EAI47605.1| unknown [environmental sequence]                       105   3e-22
gb|EAE64803.1| unknown [environmental sequence]                       105   3e-22
gb|EAD68010.1| unknown [environmental sequence]                       104   7e-22

>gb|AAD32741.1| MmcQ [Streptomyces lavendulae]
          Length = 123

 Score =  112 bits (279), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 77/114 (67%), Gaps = 1/114 (0%)

Query: 6   QNIIDFCLEKKGAVPTHPFGPDWLVIKVEGKMFALIFENIASQP-VINLKCDPVIAANLR 64
           + + DF LE   AV    FGP   V KVE K+FA++ +    +P  + LKC+P +A +LR
Sbjct: 4   EELSDFALELPEAVDDEAFGPGAAVFKVEKKVFAILQDASEDRPPQVTLKCEPDLALHLR 63

Query: 65  EQYDNVRPGYHMNKKHWNSITLDGSVPEQDIFLMIGHSYDLVVKKLPKSLRESI 118
           EQY  V PGYH+NK+HWN++ L+G+VP +++  M+ HSYD VV  LPK++RE +
Sbjct: 64  EQYAAVVPGYHVNKRHWNTVVLNGTVPVEELREMVEHSYDRVVAGLPKAVRERL 117


>gb|EAK28679.1| unknown [environmental sequence]
          Length = 133

 Score =  106 bits (264), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 1/114 (0%)

Query: 5   KQNIIDFCLEKKGAVPTHPFGPDWLVIKVEGKMFALIFENIASQPVINLKCDPVIAANLR 64
           K+ +  +CL        +PFGPD  V K++ K+FAL+  N      +NLKCDP  A  LR
Sbjct: 3   KEKVRTYCLSLPLVKEDYPFGPDVQVFKIKSKLFALM-TNRKGVERVNLKCDPEEAIILR 61

Query: 65  EQYDNVRPGYHMNKKHWNSITLDGSVPEQDIFLMIGHSYDLVVKKLPKSLRESI 118
           E +++V PGYHMNK HWN+I L+GS+P+ +I  MI  SY LVVKKL K  RES+
Sbjct: 62  EIFEDVIPGYHMNKMHWNTIILNGSIPDGEIKRMIDRSYCLVVKKLKKRDRESL 115


>gb|EAI47605.1| unknown [environmental sequence]
          Length = 133

 Score =  105 bits (262), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 73/114 (64%), Gaps = 1/114 (0%)

Query: 5   KQNIIDFCLEKKGAVPTHPFGPDWLVIKVEGKMFALIFENIASQPVINLKCDPVIAANLR 64
           K+ +  +CL        +PFGPD  V K++ K+FAL+      + V NLKCDP  A  LR
Sbjct: 3   KKTVRTYCLTLPLVREDYPFGPDVQVFKIKEKLFALMTTRQGIERV-NLKCDPEEAIILR 61

Query: 65  EQYDNVRPGYHMNKKHWNSITLDGSVPEQDIFLMIGHSYDLVVKKLPKSLRESI 118
           E +++V PGYHMNK HWN+I L GS+PE +I  MI  SY LVVKKL K  RES+
Sbjct: 62  EIFEDVIPGYHMNKMHWNTIILSGSIPEGEIKRMIDRSYCLVVKKLKKIDRESL 115


>gb|EAE64803.1| unknown [environmental sequence]
          Length = 133

 Score =  105 bits (262), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 73/114 (64%), Gaps = 1/114 (0%)

Query: 5   KQNIIDFCLEKKGAVPTHPFGPDWLVIKVEGKMFALIFENIASQPVINLKCDPVIAANLR 64
           K+ +  +CL        +PFGPD  V K++ K+FAL+      + V NLKCDP  A  LR
Sbjct: 3   KKTVRTYCLTLPLVREDYPFGPDVQVFKIKEKLFALMTTRQGIERV-NLKCDPEEAIILR 61

Query: 65  EQYDNVRPGYHMNKKHWNSITLDGSVPEQDIFLMIGHSYDLVVKKLPKSLRESI 118
           E +D+V PGYHMNK HWN+I L GS+P+ +I  MI  SY LVVKKL K  RES+
Sbjct: 62  EIFDDVIPGYHMNKMHWNTIILSGSIPDGEIKRMIDRSYCLVVKKLKKIDRESL 115


>gb|EAD68010.1| unknown [environmental sequence]
          Length = 133

 Score =  104 bits (259), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 73/114 (64%), Gaps = 1/114 (0%)

Query: 5   KQNIIDFCLEKKGAVPTHPFGPDWLVIKVEGKMFALIFENIASQPVINLKCDPVIAANLR 64
           K+ +  +CL        +PFGPD  V K++ K+FAL+      + V NLKCDP  A  LR
Sbjct: 3   KKEVRTYCLTLPLVKEDYPFGPDVQVFKIKEKLFALMTTRQDIERV-NLKCDPEEAIILR 61

Query: 65  EQYDNVRPGYHMNKKHWNSITLDGSVPEQDIFLMIGHSYDLVVKKLPKSLRESI 118
           E +++V PGYHMNK HWNSI L GS+P+ +I  MI  SY LVVKKL K  RES+
Sbjct: 62  EIFEDVIPGYHMNKMHWNSIILSGSIPDGEIKRMIDRSYCLVVKKLKKRDRESL 115


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.320    0.137    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 191,399,102
Number of extensions: 7284419
Number of successful extensions: 14172
Number of sequences better than 1.0e-05: 62
Number of HSP's gapped: 14128
Number of HSP's successfully gapped: 62
Length of query: 122
Length of database: 757,237,578
Length adjustment: 86
Effective length of query: 36
Effective length of database: 523,739,064
Effective search space: 18854606304
Effective search space used: 18854606304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 120 (50.8 bits)