BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0294.0011.p (417 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_244651.1| UDP-N-acetylglucosamine 1-carboxyvinyltransfera... 522 e-147 ref|NP_834996.1| UDP-N-acetylglucosamine 1-carboxyvinyltransfera... 504 e-141 ref|NP_653795.1| EPSP_syntase, EPSP synthase (3-phosphoshikimate... 502 e-141 ref|NP_391591.1| UDP-N-acetylglucosamine 1-carboxyvinyltransfera... 501 e-140 ref|NP_466075.1| highly similar to UDP-N-acetylglucosamine 1-car... 473 e-132 >ref|NP_244651.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus halodurans] sp|Q9K6E5|MUA2_BACHD UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2) pir||H84122 UDP-N-acetylglucosamine 1-carboxyvinyltransferase murZ [imported] - Bacillus halodurans (strain C-125) dbj|BAB07503.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus halodurans] Length = 428 Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust. Identities = 260/417 (62%), Positives = 315/417 (75%), Gaps = 2/417 (0%) Query: 1 MEKLMIGGGRPLEGVVTISGAKNSXXXXXXXXXXXESEVVLDNLPSLSDVAVYSEILEEL 60 MEKLMI GG PLEG V ISGAKNS +S V +DNLP +SDV + E+L+E+ Sbjct: 1 MEKLMIEGGTPLEGTVQISGAKNSAVALIPAAILADSTVTIDNLPDISDVRLLGELLKEI 60 Query: 61 GATVSWTGSQMRINPSRIVSIPMPNGPVKKLRASYYMMGALLGRFKEATIGLPGGCNFEP 120 G V +M I+PS++ ++P+PNG VKKLRASYY+MGA+LG+FK+A IGLPGGCN P Sbjct: 61 GGEVELADQKMVIDPSKMFAMPLPNGRVKKLRASYYLMGAMLGKFKKAVIGLPGGCNLGP 120 Query: 121 RPIDQHIKGFEALGATVTNDHGSIHLYAKELRGAKIYLDVSSVGATINIMLAASRAKGST 180 RPIDQHIKGFEALGA VTN+ G+I+L A EL+GA+IYLDV SVGATINIMLAA AKG T Sbjct: 121 RPIDQHIKGFEALGAKVTNEQGAIYLRADELKGARIYLDVVSVGATINIMLAAVLAKGRT 180 Query: 181 IIENAAKEPEIIDVATLLNSMGAVIKGAGTETIRIEGVTEMHGCRHSIIPDRIQAGTYMI 240 IIENAAKEPEIIDVATLL SMGA IKGAGT IRI+GV +HGCRHSIIPDRI+AGTYMI Sbjct: 181 IIENAAKEPEIIDVATLLTSMGARIKGAGTNVIRIDGVESLHGCRHSIIPDRIEAGTYMI 240 Query: 241 AAAATRGNVLIDNVIPKHLEALTAKLLEMGVNIEELDESIRVIGQGKYEHADVKALIYPG 300 AAA NVLIDN+IP H+E+L AKL EMGV++E LD+ +R+ + + D+K L+YPG Sbjct: 241 LAAAIGQNVLIDNIIPLHVESLIAKLREMGVDVEVLDDQVRIRNHQEKKGVDIKTLVYPG 300 Query: 301 FATDLQSPMTSMLTQAEGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEG-SRLN 359 F TDLQ P T++LTQA G S+++D +Y+ RFKH+ EL RMGA I+VEGRSAII G ++L Sbjct: 301 FPTDLQQPATTLLTQAHGTSIVTDTIYNARFKHIDELRRMGADIKVEGRSAIINGKTKLQ 360 Query: 360 AAKVKAADLRAGAALVIAXXXXXXXXXXXXXXXFIDRGYDNLVSNLRNLGADVWREN 416 AKV+A+DLRAGA+LVIA IDRGY++L L LGA +WRE Sbjct: 361 GAKVRASDLRAGASLVIA-GLTAEGITELSGVEHIDRGYEDLEQKLIGLGAKIWREQ 416 >ref|NP_834996.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus cereus ATCC 14579] gb|AAP12197.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus cereus ATCC 14579] Length = 429 Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust. Identities = 251/418 (60%), Positives = 313/418 (74%), Gaps = 3/418 (0%) Query: 1 MEKLMIGGGRPLEGVVTISGAKNSXXXXXXXXXXXESEVVLDNLPSLSDVAVYSEILEEL 60 MEKL+I GGR L G + +SGAKNS ++ V + +P++SDV + ++LEE+ Sbjct: 1 MEKLLIEGGRALNGTIRVSGAKNSAVALIPTTILADTPVTIGGVPNISDVKMLGDLLEEI 60 Query: 61 GATVSW-TGSQMRINPSRIVSIPMPNGPVKKLRASYYMMGALLGRFKEATIGLPGGCNFE 119 G V++ +M ++PS +V++P+PNG VKKLRASYY+MGA+LGRFK+A IGLPGGC+ Sbjct: 61 GGKVTYGQEEEMVVDPSNMVAMPLPNGKVKKLRASYYLMGAMLGRFKKAVIGLPGGCHLG 120 Query: 120 PRPIDQHIKGFEALGATVTNDHGSIHLYAKELRGAKIYLDVSSVGATINIMLAASRAKGS 179 PRPIDQHIKGFEALGA VTN+ G+I+L A ELRGA+IYLDV SVGATINIMLAA RAKG Sbjct: 121 PRPIDQHIKGFEALGAHVTNEQGAIYLRADELRGARIYLDVVSVGATINIMLAAVRAKGR 180 Query: 180 TIIENAAKEPEIIDVATLLNSMGAVIKGAGTETIRIEGVTEMHGCRHSIIPDRIQAGTYM 239 T+IENAAKEPEIIDVATLL SMGA IKGAGT+ IRI+GV +HGC H+IIPDRI+AGTYM Sbjct: 181 TVIENAAKEPEIIDVATLLTSMGARIKGAGTDVIRIDGVDSLHGCHHTIIPDRIEAGTYM 240 Query: 240 IAAAATRGNVLIDNVIPKHLEALTAKLLEMGVNIEELDESIRVIGQGKYEHADVKALIYP 299 I AA+ G V +DNVIP+HLE++TAKL E GV +E D+ I V G K + D+K L+YP Sbjct: 241 ILGAASGGEVTVDNVIPQHLESVTAKLREAGVQVETNDDQITVNGNRKLKVVDIKTLVYP 300 Query: 300 GFATDLQSPMTSMLTQAEGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEGS-RL 358 GF TDLQ P T++LT+A G V++D +Y RFKH+ EL RM A+I+VEGRSAI+ G L Sbjct: 301 GFPTDLQQPFTTLLTKAHGTGVVTDTIYGARFKHIDELRRMNAQIKVEGRSAIVTGPVLL 360 Query: 359 NAAKVKAADLRAGAALVIAXXXXXXXXXXXXXXXFIDRGYDNLVSNLRNLGADVWREN 416 AKVKA+DLRAGAALVIA IDRGY+N+V L+ LGA++WRE Sbjct: 361 QGAKVKASDLRAGAALVIA-GLMADGITEVTGLEHIDRGYENIVDKLKGLGANIWREQ 417 >ref|NP_653795.1| EPSP_syntase, EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) [Bacillus anthracis A2012] ref|NP_847735.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 [Bacillus anthracis str. Ames] ref|NP_981755.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 [Bacillus cereus ATCC 10987] gb|AAP29221.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 [Bacillus anthracis str. Ames] gb|AAS44363.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 [Bacillus cereus ATCC 10987] Length = 429 Score = 502 bits (1292), Expect = e-141, Method: Compositional matrix adjust. Identities = 250/418 (59%), Positives = 313/418 (74%), Gaps = 3/418 (0%) Query: 1 MEKLMIGGGRPLEGVVTISGAKNSXXXXXXXXXXXESEVVLDNLPSLSDVAVYSEILEEL 60 MEKL+I GGR L G + +SGAKNS ++ V + +P++SDV + ++LEE+ Sbjct: 1 MEKLLIEGGRALNGTIRVSGAKNSAVALIPATILADTPVTIGGVPNISDVKMLGDLLEEI 60 Query: 61 GATVSW-TGSQMRINPSRIVSIPMPNGPVKKLRASYYMMGALLGRFKEATIGLPGGCNFE 119 G V++ +M ++PS +V++P+PNG VKKLRASYY+MGA+LGRFK+A IGLPGGC+ Sbjct: 61 GGRVTYGQEEEMVVDPSNMVAMPLPNGKVKKLRASYYLMGAMLGRFKKAVIGLPGGCHLG 120 Query: 120 PRPIDQHIKGFEALGATVTNDHGSIHLYAKELRGAKIYLDVSSVGATINIMLAASRAKGS 179 PRPIDQHIKGFEALGA VTN+ G+I+L A ELRGA+IYLDV SVGATINIMLAA RAKG Sbjct: 121 PRPIDQHIKGFEALGAHVTNEQGAIYLRADELRGARIYLDVVSVGATINIMLAAVRAKGR 180 Query: 180 TIIENAAKEPEIIDVATLLNSMGAVIKGAGTETIRIEGVTEMHGCRHSIIPDRIQAGTYM 239 T+IENAAKEPEIIDVATLL SMGA IKGAGT+ IRI+GV +HGC H+IIPDRI+AGTYM Sbjct: 181 TVIENAAKEPEIIDVATLLTSMGARIKGAGTDVIRIDGVDSLHGCHHTIIPDRIEAGTYM 240 Query: 240 IAAAATRGNVLIDNVIPKHLEALTAKLLEMGVNIEELDESIRVIGQGKYEHADVKALIYP 299 I AA+ G V +DNVIP+HLE++TAKL E GV +E D+ I V G + + D+K L+YP Sbjct: 241 ILGAASGGEVTVDNVIPQHLESVTAKLREAGVQVETNDDQITVNGDRRLKVVDIKTLVYP 300 Query: 300 GFATDLQSPMTSMLTQAEGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEGS-RL 358 GF TDLQ P T++LT+A G V++D +Y RFKH+ EL RM A+I+VEGRSAI+ G L Sbjct: 301 GFPTDLQQPFTTLLTKAHGTGVVTDTIYGARFKHIDELRRMNAQIKVEGRSAIVTGPVLL 360 Query: 359 NAAKVKAADLRAGAALVIAXXXXXXXXXXXXXXXFIDRGYDNLVSNLRNLGADVWREN 416 AKVKA+DLRAGAALVIA IDRGY+N+V L+ LGA++WRE Sbjct: 361 QGAKVKASDLRAGAALVIA-GLMADGITEVTGLEHIDRGYENIVDKLKGLGANIWREQ 417 >ref|NP_391591.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus subtilis] sp|P19670|MUA2_BACSU UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2) pir||G32354 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) murZ - Bacillus subtilis emb|CAA89875.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus subtilis] emb|CAB15727.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus subtilis subsp. subtilis str. 168] Length = 429 Score = 501 bits (1289), Expect = e-140, Method: Compositional matrix adjust. Identities = 252/417 (60%), Positives = 309/417 (74%), Gaps = 3/417 (0%) Query: 1 MEKLMIGGGRPLEGVVTISGAKNSXXXXXXXXXXXESEVVLDNLPSLSDVAVYSEILEEL 60 MEKL I GG L G V ISGAKNS SEV ++ LP +SD+ ++L+E+ Sbjct: 1 MEKLNIAGGDSLNGTVHISGAKNSAVALIPATILANSEVTIEGLPEISDIETLRDLLKEI 60 Query: 61 GATVSWTGSQMRINPSRIVSIPMPNGPVKKLRASYYMMGALLGRFKEATIGLPGGCNFEP 120 G V + +M ++P+ ++S+P+PNG VKKLRASYY+MGA+LGRFK+A IGLPGGC+ P Sbjct: 61 GGNVHFENGEMVVDPTSMISMPLPNGKVKKLRASYYLMGAMLGRFKQAVIGLPGGCHLGP 120 Query: 121 RPIDQHIKGFEALGATVTNDHGSIHLYAKELRGAKIYLDVSSVGATINIMLAASRAKGST 180 RPIDQHIKGFEALGA VTN+ G+I+L A+ LRGA+IYLDV SVGATINIMLAA A+G T Sbjct: 121 RPIDQHIKGFEALGAEVTNEQGAIYLRAERLRGARIYLDVVSVGATINIMLAAVLAEGKT 180 Query: 181 IIENAAKEPEIIDVATLLNSMGAVIKGAGTETIRIEGVTEMHGCRHSIIPDRIQAGTYMI 240 IIENAAKEPEIIDVATLL SMGA IKGAGT IRI+GV E+HGC+H+IIPDRI+AGT+MI Sbjct: 181 IIENAAKEPEIIDVATLLTSMGAKIKGAGTNVIRIDGVKELHGCKHTIIPDRIEAGTFMI 240 Query: 241 AAAATRGNVLIDNVIPKHLEALTAKLLEMGVNIEELDESIRVI-GQGKYEHADVKALIYP 299 A AA V+IDNVIP HLE+LTAKL EMG +IE D+ + ++ GQ + DVK L+YP Sbjct: 241 AGAAMGKEVIIDNVIPTHLESLTAKLREMGYHIETSDDQLLIVGGQKNLKPVDVKTLVYP 300 Query: 300 GFATDLQSPMTSMLTQAEGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEGS-RL 358 GF TDLQ PMT++LT+A+G SV++D +YS RFKH+ EL RMGA ++VEGRSAII G L Sbjct: 301 GFPTDLQQPMTALLTRAKGTSVVTDTIYSARFKHIDELRRMGANMKVEGRSAIITGPVEL 360 Query: 359 NAAKVKAADLRAGAALVIAXXXXXXXXXXXXXXXFIDRGYDNLVSNLRNLGADVWRE 415 AKVKA+DLRAG+ LV+A IDRGY +L L LGA +WRE Sbjct: 361 QGAKVKASDLRAGSCLVVA-GLMADGVTEITGLEHIDRGYSSLEKKLEGLGATIWRE 416 >ref|NP_466075.1| highly similar to UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Listeria monocytogenes EGD-e] sp|Q8Y4A2|MUA2_LISMO UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2) pir||AH1393 UDP-N-acetylglucosamine 1-carboxyvinyltransferase homolog murZ [imported] - Listeria monocytogenes (strain EGD-e) emb|CAD00630.1| murZ [Listeria monocytogenes] Length = 423 Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust. Identities = 237/416 (56%), Positives = 304/416 (73%), Gaps = 2/416 (0%) Query: 2 EKLMIGGGRPLEGVVTISGAKNSXXXXXXXXXXXESEVVLDNLPSLSDVAVYSEILEELG 61 ++L+I GG+ L G + + GAKNS ESEVVL+ LP +SDV +ILEELG Sbjct: 3 DRLIIQGGKKLSGTLQVDGAKNSAVALIPAAILAESEVVLEGLPDISDVYTLYDILEELG 62 Query: 62 ATVSWTGSQMRINPSRIVSIPMPNGPVKKLRASYYMMGALLGRFKEATIGLPGGCNFEPR 121 +V + I+P+ ++S+P+P+G VKKLRASYY+MGA+LGRFK+A IGLPGGC PR Sbjct: 63 GSVRYDNKTAIIDPTDMLSMPLPSGNVKKLRASYYLMGAMLGRFKKAVIGLPGGCYLGPR 122 Query: 122 PIDQHIKGFEALGATVTNDHGSIHLYAKELRGAKIYLDVSSVGATINIMLAASRAKGSTI 181 PIDQHIKGFEALGA VTN+ G+I+L A EL+GA+IYLDV SVGATINIMLAA RAKG T+ Sbjct: 123 PIDQHIKGFEALGAKVTNEQGAIYLRADELKGARIYLDVVSVGATINIMLAAVRAKGKTV 182 Query: 182 IENAAKEPEIIDVATLLNSMGAVIKGAGTETIRIEGVTEMHGCRHSIIPDRIQAGTYMIA 241 IENAAKEPEIIDVATLL +MGA+IKGAGT+TIRI GV +HGC H+IIPDRI+AGT+M+ Sbjct: 183 IENAAKEPEIIDVATLLTNMGAIIKGAGTDTIRITGVDHLHGCHHTIIPDRIEAGTFMVL 242 Query: 242 AAATRGNVLIDNVIPKHLEALTAKLLEMGVNIEELDESIRVIGQGKYEHADVKALIYPGF 301 AAA+ + I+NVIP HLE + AKL EMGV ++ ++SI + + D+K YPGF Sbjct: 243 AAASGKGIRIENVIPTHLEGIIAKLTEMGVPMDIEEDSIFIGEVENIKKVDIKTYAYPGF 302 Query: 302 ATDLQSPMTSMLTQAEGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEG-SRLNA 360 TDLQ P+T++LT+AEG SV++D +Y +RFKH+ EL RMG K ++EGRSA+I G ++L Sbjct: 303 PTDLQQPLTALLTRAEGSSVITDTIYPSRFKHIAELERMGGKFKLEGRSAVISGPAKLQG 362 Query: 361 AKVKAADLRAGAALVIAXXXXXXXXXXXXXXXFIDRGYDNLVSNLRNLGADVWREN 416 +KV A DLRAGAALVIA I+RGY ++ L +GAD+ R + Sbjct: 363 SKVTATDLRAGAALVIA-GLLAEGRTEIHGVEHIERGYSKIIEKLSAIGADITRSS 417 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.134 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 539,477,962 Number of extensions: 21174121 Number of successful extensions: 54937 Number of sequences better than 1.0e-05: 857 Number of HSP's gapped: 52813 Number of HSP's successfully gapped: 858 Length of query: 417 Length of database: 757,237,578 Length adjustment: 128 Effective length of query: 289 Effective length of database: 409,704,906 Effective search space: 118404717834 Effective search space used: 118404717834 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 127 (53.5 bits)