BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0291.0015.p (205 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_656979.1| lactamase_B, Metallo-beta-lactamase superfamily... 219 4e-56 ref|NP_845442.1| metallo-beta-lactamase family protein [Bacillus... 218 5e-56 ref|NP_979442.1| metallo-beta-lactamase family protein [Bacillus... 215 5e-55 ref|NP_832831.1| Metal-dependent hydrolase [Bacillus cereus ATCC... 214 8e-55 gb|AAC46171.1| orfL1 [Methylobacterium extorquens] 214 1e-54 >ref|NP_656979.1| lactamase_B, Metallo-beta-lactamase superfamily [Bacillus anthracis A2012] Length = 285 Score = 219 bits (557), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 108/205 (52%), Positives = 142/205 (69%), Gaps = 8/205 (3%) Query: 1 VLTHGHFDHVGNLKELMEEWQEVPVYAHPLELPYLTGLQDYPPADPAVGGGLMATVSPLY 60 +LTHGHFDHVG + EL++ W +VPVYAH +E+P+LTG Q YP DP V GG++A +SPL+ Sbjct: 84 ILTHGHFDHVGGIIELIKYW-DVPVYAHQMEIPFLTGQQSYPKPDPTVEGGMVAKMSPLF 142 Query: 61 PHRGLHLGEGVHPLPEDGSVPGAKGWTWVHTPGHSPGHISLFRPADKVLISGDAVITVKQ 120 P+ + LG + LP DG+VP G+ W+HTPGH+PGHISLFR D+ LI+GDA +TVKQ Sbjct: 143 PNEPIDLGNSIKVLPTDGTVPHVPGFRWIHTPGHTPGHISLFREKDRTLIAGDAFVTVKQ 202 Query: 121 ESAFAVITQHKELHGPPAYFTTDWIEAEKSVRKLALLDPQMVIPGHGLPMAGPELSGXXX 180 E + VITQ +E+ GPP Y TTDW A++SV L L P + GHGLPM+G EL Sbjct: 203 EYLYKVITQEQEISGPPRYLTTDWKAAKESVITLEKLKPLAAVTGHGLPMSG-EL----- 256 Query: 181 XLSAQFAHLCKTFKELSVPSQGKFV 205 LS L + F +++VP GK+V Sbjct: 257 -LSTSLNTLVQEFDKIAVPDYGKYV 280 >ref|NP_845442.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gb|AAP26928.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] Length = 281 Score = 218 bits (556), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 108/205 (52%), Positives = 142/205 (69%), Gaps = 8/205 (3%) Query: 1 VLTHGHFDHVGNLKELMEEWQEVPVYAHPLELPYLTGLQDYPPADPAVGGGLMATVSPLY 60 +LTHGHFDHVG + EL++ W +VPVYAH +E+P+LTG Q YP DP V GG++A +SPL+ Sbjct: 80 ILTHGHFDHVGGIIELIKYW-DVPVYAHQMEIPFLTGQQSYPKPDPTVEGGMVAKMSPLF 138 Query: 61 PHRGLHLGEGVHPLPEDGSVPGAKGWTWVHTPGHSPGHISLFRPADKVLISGDAVITVKQ 120 P+ + LG + LP DG+VP G+ W+HTPGH+PGHISLFR D+ LI+GDA +TVKQ Sbjct: 139 PNEPIDLGNSIKVLPTDGTVPHVPGFRWIHTPGHTPGHISLFREKDRTLIAGDAFVTVKQ 198 Query: 121 ESAFAVITQHKELHGPPAYFTTDWIEAEKSVRKLALLDPQMVIPGHGLPMAGPELSGXXX 180 E + VITQ +E+ GPP Y TTDW A++SV L L P + GHGLPM+G EL Sbjct: 199 EYLYKVITQEQEISGPPRYLTTDWKAAKESVITLEKLKPLAAVTGHGLPMSG-EL----- 252 Query: 181 XLSAQFAHLCKTFKELSVPSQGKFV 205 LS L + F +++VP GK+V Sbjct: 253 -LSTSLNTLVQEFDKIAVPDYGKYV 276 >ref|NP_979442.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gb|AAS42050.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] Length = 281 Score = 215 bits (548), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 106/205 (51%), Positives = 140/205 (68%), Gaps = 8/205 (3%) Query: 1 VLTHGHFDHVGNLKELMEEWQEVPVYAHPLELPYLTGLQDYPPADPAVGGGLMATVSPLY 60 +LTHGHFDHVG + EL++ W +VPVYAH +E+P+LTG Q YP DP V GG++A +SPL+ Sbjct: 80 ILTHGHFDHVGGIIELIKYW-DVPVYAHEMEIPFLTGQQSYPEPDPTVEGGIVAKMSPLF 138 Query: 61 PHRGLHLGEGVHPLPEDGSVPGAKGWTWVHTPGHSPGHISLFRPADKVLISGDAVITVKQ 120 P+ + LG V LP DG+VP + W+HTPGH+PGHISLFR D+ LI+GDA +TVKQ Sbjct: 139 PNEPIDLGNSVTVLPADGTVPHMPEFRWIHTPGHTPGHISLFREKDRTLIAGDAFVTVKQ 198 Query: 121 ESAFAVITQHKELHGPPAYFTTDWIEAEKSVRKLALLDPQMVIPGHGLPMAGPELSGXXX 180 E + V TQ +E+ GPP Y TTDW A++SV KL L P + I GHG+PM+G Sbjct: 199 EYLYKVFTQEQEISGPPRYLTTDWKAAKESVIKLEELKPLVAITGHGIPMSG-------D 251 Query: 181 XLSAQFAHLCKTFKELSVPSQGKFV 205 LS L + F +++VP GK+V Sbjct: 252 LLSTSLNTLVQEFDKIAVPDYGKYV 276 >ref|NP_832831.1| Metal-dependent hydrolase [Bacillus cereus ATCC 14579] gb|AAP10032.1| Metal-dependent hydrolase [Bacillus cereus ATCC 14579] Length = 285 Score = 214 bits (546), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 106/205 (51%), Positives = 141/205 (68%), Gaps = 8/205 (3%) Query: 1 VLTHGHFDHVGNLKELMEEWQEVPVYAHPLELPYLTGLQDYPPADPAVGGGLMATVSPLY 60 +LTHGHFDHVG + EL++ W +V VYAH +E+P+LTG Q YP DP V GG++A +SPL+ Sbjct: 84 ILTHGHFDHVGGIIELIKHW-DVHVYAHQMEIPFLTGQQSYPEPDPTVEGGMVAKMSPLF 142 Query: 61 PHRGLHLGEGVHPLPEDGSVPGAKGWTWVHTPGHSPGHISLFRPADKVLISGDAVITVKQ 120 P+ + LG V LP DG+VP + W+HTPGH+PGHISLFR D+ LI+GDA +TVKQ Sbjct: 143 PNEPIDLGNNVKALPTDGTVPHMPEFRWIHTPGHTPGHISLFREKDRTLIAGDAFVTVKQ 202 Query: 121 ESAFAVITQHKELHGPPAYFTTDWIEAEKSVRKLALLDPQMVIPGHGLPMAGPELSGXXX 180 E + VITQ +E+ GPP Y TTDW A++SV KL L P + GHG+PM+G EL Sbjct: 203 EYLYKVITQEQEISGPPRYLTTDWKAAKESVLKLEKLKPLTAVTGHGIPMSG-EL----- 256 Query: 181 XLSAQFAHLCKTFKELSVPSQGKFV 205 LS L + F +++VP GK++ Sbjct: 257 -LSTSLKTLVQEFDKIAVPDYGKYI 280 >gb|AAC46171.1| orfL1 [Methylobacterium extorquens] Length = 256 Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 109/205 (53%), Positives = 136/205 (66%), Gaps = 8/205 (3%) Query: 1 VLTHGHFDHVGNLKELMEEWQEVPVYAHPLELPYLTGLQDYPPADPAVGGGLMATVSPLY 60 VLTHGHFDHVG L++L EEW + PVYAH LE PYL G YP DP+VGGGLMA ++PLY Sbjct: 45 VLTHGHFDHVGVLEDLAEEW-DTPVYAHGLERPYLDGSAAYPTPDPSVGGGLMARIAPLY 103 Query: 61 PHRGLHLGEGVHPLPEDGSVPGAKGWTWVHTPGHSPGHISLFRPADKVLISGDAVITVKQ 120 P + +++ + LP DGSVP GW W+HTPGH+PGH+S +R AD LI GDA +T Q Sbjct: 104 PTKPVNVSSRLQMLPADGSVPPMPGWRWLHTPGHAPGHVSFWREADGSLIVGDAFVTTAQ 163 Query: 121 ESAFAVITQHKELHGPPAYFTTDWIEAEKSVRKLALLDPQMVIPGHGLPMAGPELSGXXX 180 ESA+AV TQ E+HGPP Y T DW A SVR LA L P+ + GHG + GPE Sbjct: 164 ESAYAVATQEPEVHGPPMYLTIDWPAAGGSVRSLAALKPERAVTGHGRALHGPE------ 217 Query: 181 XLSAQFAHLCKTFKELSVPSQGKFV 205 L L + F+ ++VP QG++V Sbjct: 218 -LRRGLDALAQDFERVAVPDQGRYV 241 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.138 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 348,733,925 Number of extensions: 14876809 Number of successful extensions: 31525 Number of sequences better than 1.0e-05: 55 Number of HSP's gapped: 31538 Number of HSP's successfully gapped: 55 Length of query: 205 Length of database: 757,237,578 Length adjustment: 120 Effective length of query: 85 Effective length of database: 431,425,698 Effective search space: 36671184330 Effective search space used: 36671184330 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 123 (52.0 bits)