BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0290.0012.p (940 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00060750.1| COG3459: Cellobiose phosphorylase [Clostridiu... 1007 0.0 dbj|BAB71818.1| cellodextrin phosphorylase [Clostridium thermoce... 1006 0.0 pir||T00045 cellodextrin phosphorylase - Clostridium thermocellu... 855 0.0 emb|CAB16926.1| cellobiose-phosphorylase [Thermotoga neapolitana] 142 5e-32 gb|AAB95491.2| cellobiose phosphorylase [Thermotoga neapolitana] 142 5e-32 >ref|ZP_00060750.1| COG3459: Cellobiose phosphorylase [Clostridium thermocellum ATCC 27405] Length = 984 Score = 1007 bits (2603), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/890 (54%), Positives = 602/890 (67%), Gaps = 3/890 (0%) Query: 52 QTAQIPEAAVSEALAQLQAAPGWAGILNAEGEHVIDLRSPVPGPHFAVNLLLGNRLRFPH 111 Q ++PE A + WAG L +GEHVIDL P PGPHF VNLL+GNRL F Sbjct: 96 QKIEVPEDVNKALRATVSDVKHWAGYLTEDGEHVIDLLKPAPGPHFYVNLLIGNRLGFKR 155 Query: 112 PLQTTPKSVVDRFGGGSFRSHAATQVLATRWDMRQEENGFPANRQFYLFEDGKQIFYSAD 171 LQTTPKSVVDRFG GSFRSHAATQVLATR+DMRQEENGFPANRQFYL+EDGKQIFYSA Sbjct: 156 TLQTTPKSVVDRFGRGSFRSHAATQVLATRFDMRQEENGFPANRQFYLYEDGKQIFYSA- 214 Query: 172 PGDEGIESAVCTHSQNATVISYRTRCGLEITRTIFILPHAEGMPLATETQRIEIVNRGDA 231 D+ I A C HS N TVI Y+T C LEITRTIF++PH +G PLATE QRIEI N D Sbjct: 215 LIDDNIVEATCKHSCNRTVIKYKTACNLEITRTIFLVPHKKGFPLATELQRIEIKNASDK 274 Query: 232 GRRLRIVYTGMFGSAAPGALFEDVLYSNVIMQGGVLQDASGAVAAISPDYYPEGGRHDLR 291 R L I YTGMFG+ A A+FEDV Y+NVIMQ L + G I+PDYYPE + D R Sbjct: 275 ARNLSITYTGMFGTGAVHAIFEDVTYTNVIMQSAALYNDKGEFIGITPDYYPEEFKQDTR 334 Query: 292 FHTMIIHGEGGPVLPREYCVSYNEFVGTGSLHRPAGALKLSSILHRKGPGFFAVAGELHI 351 F TMI+ P+ +C YN+FVGTG+L PAG L++ L+RKGPGFFA+ + Sbjct: 335 FVTMIVRNGDEKSFPQSFCTDYNDFVGTGTLEHPAGGCNLNNKLNRKGPGFFALGAPFTV 394 Query: 352 PAGSSAAVDQLTGLVSDKSGAPWNDTVLADEVGALVARFSDRKAAESALAESSGFVRDYG 411 G + +D TGL S K ++D V+ E+ L+ F ++ E L E F +YG Sbjct: 395 EPGKTVIIDTFTGLSSSKDNENYSDAVMLRELDNLLRYFEKSESVEETLNEIINFHENYG 454 Query: 412 KFLQVFTGDENFDVFVNRNLPFQVFYQTFVSRSFCQTQKGYREIGFREIQDLYASMYYFT 471 K+ Q TG++ FD NRNL FQV YQTF+SRSF QTQKGYREIGFREIQDL+ASMYYF Sbjct: 455 KYFQFNTGNKLFDSGFNRNLAFQVLYQTFMSRSFGQTQKGYREIGFREIQDLFASMYYFI 514 Query: 472 GMGQSALVKSLLKEWTGMVFELGYAYHNFFWAGKEPGKWSDDALWLVQAVYRYVMLTGDL 531 +G VK LL EWT V+++GYA HNF+W GK+PG +SDD+LWL+QA YRY++ T D Sbjct: 515 NIGYQDFVKELLFEWTANVYKMGYANHNFYWVGKQPGLYSDDSLWLLQAYYRYIIYTKDT 574 Query: 532 EFLDESCPVA-GQETSRPVFETLKAVIVYSGWISVGRHGLPLLDYADWNDCLKLDDTYLN 590 L+E PVA G R V ETLKA+I YS ISVG HGLPLLD ADWNDCLK+D ++ Sbjct: 575 SVLNEEVPVADGNNEKRAVRETLKAIIQYSACISVGDHGLPLLDLADWNDCLKIDSNSID 634 Query: 591 GPAKEERYRKQL-QAGGVFGDPLDSDYSESVMNAFLLKVAVDELSILAARKGEQDYAAEL 649 G KE+ Y +QL + G +GD SDYSESVMNAFLLK+A+D L+ +A + A ++ Sbjct: 635 GATKEKLYYEQLKKTNGKYGDRFMSDYSESVMNAFLLKLAIDHLAEIATLDNDTQLAQQM 694 Query: 650 DRFGAELRGRIQEHAWKDNFFARVLFNRYADGEYTYLGAAGDGLSSDPAADGSYFLNSFS 709 E+ RIQ+HAWK+NFFARVL NRY DG YTYLGA GD LS+DP DG YFLNSF+ Sbjct: 695 SELSKEVTDRIQKHAWKENFFARVLINRYKDGSYTYLGAKGDKLSADPNIDGVYFLNSFA 754 Query: 710 WSILSGCADEAQITVMLDTMKSHLMTPYGLKLVSPVALGRVSSHTASDEYFPGDRENGGV 769 WS+LS A + QI +M+D +K +L+TPYGL+LV+P L ++++ TA+ YF GDRENG V Sbjct: 755 WSVLSDVATDEQIAIMVDVIKKYLLTPYGLRLVTPADLNKIANDTATGHYFFGDRENGAV 814 Query: 770 FKHXXXXXXXXXFKGAKEVSDAGLAAELGRFGYWLLDRIMPFKTMEDPFAICGNPRFCTQ 829 FKH K AK+V D LA E+ R Y+++D ++P+K +E+PF + GNPR CTQ Sbjct: 815 FKHASMMAVVALIKAAKKVKDNELAKEMARIAYFMIDLVLPYKNLENPFQVAGNPRICTQ 874 Query: 830 YNNSETGENIGPMXXXXXXXXXXXXMEALGIEYTAQGIALNPILREEQTELSYTLKLGGS 889 Y N++TGENIGP+ + GIEYT GI+ NPILREE+T+L++TLK Sbjct: 875 YINTDTGENIGPLLSGTATWLNLNLISLAGIEYTRDGISFNPILREEETQLNFTLKAPKC 934 Query: 890 SYCIRISKPEGFRRMQNGTARLTLDGRALENGLVPTPDDGLTHEVELHFE 939 SY I+KP GF RM++ L +DG+ ++N ++P D H V L F+ Sbjct: 935 SYKFSITKPVGFARMESSEYELFVDGQKIDNTVIPMYTDEKEHIVTLKFK 984 >dbj|BAB71818.1| cellodextrin phosphorylase [Clostridium thermocellum] Length = 984 Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/890 (54%), Positives = 601/890 (67%), Gaps = 3/890 (0%) Query: 52 QTAQIPEAAVSEALAQLQAAPGWAGILNAEGEHVIDLRSPVPGPHFAVNLLLGNRLRFPH 111 Q ++PE A + WAG L +GEHVIDL P PGPHF VNLL+GNRL F Sbjct: 96 QKIEVPEDVNKALKATVSDVKHWAGYLTEDGEHVIDLLKPAPGPHFYVNLLIGNRLGFKR 155 Query: 112 PLQTTPKSVVDRFGGGSFRSHAATQVLATRWDMRQEENGFPANRQFYLFEDGKQIFYSAD 171 LQTTPKSVVDRFG GSFRSHAATQVLATR+DMRQEENGFPANRQFYL+EDGKQIFYSA Sbjct: 156 TLQTTPKSVVDRFGRGSFRSHAATQVLATRFDMRQEENGFPANRQFYLYEDGKQIFYSA- 214 Query: 172 PGDEGIESAVCTHSQNATVISYRTRCGLEITRTIFILPHAEGMPLATETQRIEIVNRGDA 231 D+ I A C HS N TVI Y+T C LEITRTIF++PH +G PLATE QRIEI N D Sbjct: 215 LIDDNIVEATCKHSCNRTVIKYKTACNLEITRTIFLVPHKKGFPLATELQRIEIKNASDK 274 Query: 232 GRRLRIVYTGMFGSAAPGALFEDVLYSNVIMQGGVLQDASGAVAAISPDYYPEGGRHDLR 291 R L I YTGMFG+ A A+FEDV Y+NVIMQ L + G I+PDYYPE + D R Sbjct: 275 ARNLSITYTGMFGTGAVHAIFEDVTYTNVIMQSAALYNDKGEFIGITPDYYPEEFKQDTR 334 Query: 292 FHTMIIHGEGGPVLPREYCVSYNEFVGTGSLHRPAGALKLSSILHRKGPGFFAVAGELHI 351 F TMI+ P+ +C YN+FVGTG+L PAG L++ L+RKGPGFFA+ + Sbjct: 335 FVTMIVRNGDEKSFPQSFCTDYNDFVGTGTLEHPAGGCNLNNKLNRKGPGFFALGAPFTV 394 Query: 352 PAGSSAAVDQLTGLVSDKSGAPWNDTVLADEVGALVARFSDRKAAESALAESSGFVRDYG 411 G + +D TGL S K ++D V+ E+ L+ F ++ E L E F +YG Sbjct: 395 EPGKTVIIDTFTGLSSSKDNENYSDAVMLRELDNLLRYFEKSESVEETLNEIINFHENYG 454 Query: 412 KFLQVFTGDENFDVFVNRNLPFQVFYQTFVSRSFCQTQKGYREIGFREIQDLYASMYYFT 471 K+ Q TG++ FD NRNL FQV YQTF+SRSF QTQKGYREIGFREIQDL+ASMYYF Sbjct: 455 KYFQFNTGNKLFDSGFNRNLAFQVLYQTFMSRSFGQTQKGYREIGFREIQDLFASMYYFI 514 Query: 472 GMGQSALVKSLLKEWTGMVFELGYAYHNFFWAGKEPGKWSDDALWLVQAVYRYVMLTGDL 531 +G VK LL EWT V+++GYA HNF+W GK+PG +SDD+LWL+QA YRY++ T D Sbjct: 515 NIGYQDFVKELLFEWTANVYKMGYANHNFYWVGKQPGLYSDDSLWLLQAYYRYIIYTKDT 574 Query: 532 EFLDESCPVA-GQETSRPVFETLKAVIVYSGWISVGRHGLPLLDYADWNDCLKLDDTYLN 590 L+E PVA G R V ETLKA+I YS ISVG HGLPLLD ADWNDCLK+ ++ Sbjct: 575 SVLNEEVPVADGNNEKRAVRETLKAIIQYSACISVGDHGLPLLDLADWNDCLKIASNSID 634 Query: 591 GPAKEERYRKQL-QAGGVFGDPLDSDYSESVMNAFLLKVAVDELSILAARKGEQDYAAEL 649 G KE+ Y +QL + G +GD SDYSESVMNAFLLK+A+D L+ +A + A ++ Sbjct: 635 GATKEKLYYEQLKKTNGKYGDRFMSDYSESVMNAFLLKLAIDHLAEIATLDNDTQLAQQM 694 Query: 650 DRFGAELRGRIQEHAWKDNFFARVLFNRYADGEYTYLGAAGDGLSSDPAADGSYFLNSFS 709 E+ RIQ+HAWK+NFFARVL NRY DG YTYLGA GD LS+DP DG YFLNSF+ Sbjct: 695 SELSKEVTDRIQKHAWKENFFARVLINRYKDGSYTYLGAKGDKLSADPNIDGVYFLNSFA 754 Query: 710 WSILSGCADEAQITVMLDTMKSHLMTPYGLKLVSPVALGRVSSHTASDEYFPGDRENGGV 769 WS+LS A + QI +M+D +K HL+TPYGL+LV+P L ++++ TA+ YF GDRENG V Sbjct: 755 WSVLSDVATDEQIAIMVDVIKKHLLTPYGLRLVTPADLNKIANDTATGHYFFGDRENGAV 814 Query: 770 FKHXXXXXXXXXFKGAKEVSDAGLAAELGRFGYWLLDRIMPFKTMEDPFAICGNPRFCTQ 829 FKH K AK+V D LA E+ R Y+++D ++P+K +E+PF + GNPR CTQ Sbjct: 815 FKHASMMAVAALIKAAKKVKDNELAKEMARIAYFMIDLVLPYKNLENPFQVAGNPRICTQ 874 Query: 830 YNNSETGENIGPMXXXXXXXXXXXXMEALGIEYTAQGIALNPILREEQTELSYTLKLGGS 889 Y N++TGENIGP+ + GIEYT GI+ NPILREE+T+L++TLK Sbjct: 875 YINTDTGENIGPLLSGTATWLNLNLISLAGIEYTRDGISFNPILREEETQLNFTLKAPKC 934 Query: 890 SYCIRISKPEGFRRMQNGTARLTLDGRALENGLVPTPDDGLTHEVELHFE 939 SY I+KP GF RM++ L +DG+ ++N ++P D H V L F+ Sbjct: 935 SYKFSITKPVGFARMESSEYELFVDGQKIDNTVIPMYTDEKEHIVTLKFK 984 >pir||T00045 cellodextrin phosphorylase - Clostridium thermocellum dbj|BAA22081.1| cellodextrin phosphorylase [Clostridium thermocellum] Length = 980 Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/896 (49%), Positives = 559/896 (62%), Gaps = 19/896 (2%) Query: 52 QTAQIPEAAVSEALAQLQAAPGWAGILNAEGEHVIDLRSPVPGPHFAVNLLLGNRLRFPH 111 Q ++PE A + WAG L +GEHVI L P PGPHF VNLL+GNRL F Sbjct: 96 QKIEVPEDVNKALRATVSDVKHWAGYLTEDGEHVIALLKPAPGPHFYVNLLIGNRLGFKR 155 Query: 112 PLQTTPKSVVDRFGGGSFRSHAATQVLATRWDMRQEENGFPANRQFYLFEDGKQIFYSAD 171 LQTTPKSVVDRFG GSFRSHAATQVLATR+DMRQEENGFPANRQFYL+EDGKQIFYSA Sbjct: 156 TLQTTPKSVVDRFGRGSFRSHAATQVLATRFDMRQEENGFPANRQFYLYEDGKQIFYSA- 214 Query: 172 PGDEGIESAVCTHSQNATVISYRTRCGLEITRTIFILPHAEGMPLATETQRIEIVNRGDA 231 D+ I A C HS N TVI Y+T C LEITRTIF++PH +G PLATE QRIEI N D Sbjct: 215 LIDDNIVEATCKHSCNRTVIKYKTACNLEITRTIFLVPHKKGFPLATELQRIEIKNASDK 274 Query: 232 GRRLRIVYTGMFGSAAPGALFEDVLYSNVIMQGGVLQDASGAVAAISPDYYPEGGRHDLR 291 R L I YTGMFG+ A A+FEDV Y+NVIMQ L + G I+PDYYPE + D R Sbjct: 275 ARNLSITYTGMFGTGAVHAIFEDVTYTNVIMQSAALYNDKGEFIGITPDYYPEEFKQDTR 334 Query: 292 FHTMIIHGEGGPVLPREYCVSYNEFVGTGSLHRPAGALKLSSILHRKGPGFFAVAGELHI 351 F TMI+ P+ +C YN+FVGTG+L PA + + + G +++ Sbjct: 335 FVTMIVRNGDEKSFPQSFCTDYNDFVGTGTLEHPAADV-IEQQAEPQRSGILCPGCAVYV 393 Query: 352 PAGSSAAVDQLTGLVSDKSGAPWNDTVLADEVGALVARFSDRKAAESALAESSGFVRDYG 411 G + +D TGL S K ++D V+ E+ L+ F ++ E L E F +YG Sbjct: 394 EPGKTVIIDTFTGLSSSKDNENYSDAVMLRELDNLLRYFEKSESVEETLNEIINFHENYG 453 Query: 412 KFLQVFTGDENFDVFVNRNLPFQVFYQTFVSRSFCQTQKGYREIGFREIQDLYASMYYFT 471 K+ Q G++ FD NRNL +V YQTF+ SF QTQKGYREIG L+ASMYYF Sbjct: 454 KYFQFNPGNKLFDSGFNRNLALEVLYQTFMICSFGQTQKGYREIGSGN-SGLFASMYYFI 512 Query: 472 GMGQSALVKSLLKEWTGMVFELGYAYHNFFWAGKEPGKWSDDALWLVQAVYRYVMLTGDL 531 +G VK LL EWT V+++GYA HNF+ GK+ A L+QA YRY++ T D Sbjct: 513 NIGYQDFVKELLFEWTANVYKMGYANHNFYLVGKQRDCIPMTAC-LLQAYYRYIIYTKDT 571 Query: 532 EFLDESCPVA-GQETSRPVFETLKAVIVYSGWISVGRHGLPLLDYADWNDCLKLDDTYLN 590 L+E PVA G R V ETLKA+I YS ISVG HGLPLLD ADWNDCLK+D ++ Sbjct: 572 SVLNEEVPVADGNNEKRAVRETLKAIIQYSACISVGDHGLPLLDLADWNDCLKIDSNSID 631 Query: 591 GPAKEERYRKQLQ-AGGVFGDPLDSDYSESVMNAFLLKVAVDELSILAARKGEQDYAAEL 649 G KE+ Y +QL+ G +GD SDYSESVMNAFLLK+A+D L+ +A + A ++ Sbjct: 632 GATKEKLYYEQLKKTNGKYGDRFMSDYSESVMNAFLLKLAIDHLAEIATLDNDTQLAQQM 691 Query: 650 DRFGAELRGRIQEHAWKDNFFARVLFNRYADGEYTYLGAAGDGLSSDPAADGSYFLNSFS 709 E+ RIQ+HAWK+NFFARVL NRY DG YTYLGA GD LS+DP DG YFLNSF+ Sbjct: 692 SELSKEVTDRIQKHAWKENFFARVLINRYKDGSYTYLGAKGDKLSADPNIDGVYFLNSFA 751 Query: 710 WSILSGCADEAQITVMLDTMKSHLMTPYGLKLVSPVALGRVSSHTASDEYFPGDRENGGV 769 WS+LS A + QI +M+D +K +L+TPYGL+LV+P L ++++ TA+ YF GDRENG V Sbjct: 752 WSVLSDVATDEQIAIMVDVIKKYLLTPYGLRLVTPADLNKIANDTATGHYFFGDRENGAV 811 Query: 770 FKHXXXXXXXXXFKGAKEVSDAGLAAELGRFGYWLLDRIMPFKT-----MEDPFAICGNP 824 FKH K AK+V D LA E+ R Y+++D ++P+KT +++ N Sbjct: 812 FKHASMMAVVALIKAAKKVKDNELAKEMARIAYFMIDLVLPYKTEIRSRLQEIQGYALNI 871 Query: 825 RFCTQYNNSETGENIGPMXXXXXXXXXXXXMEAL-GIEYTAQGIALNPILREEQTELSYT 883 TQ E I + +L GIEYT GI+ NPILREE+T+L++T Sbjct: 872 SILTQ-------EKILTFVEPGTATWLNLNLISLAGIEYTRDGISFNPILREEETQLNFT 924 Query: 884 LKLGGSSYCIRISKPEGFRRMQNGTARLTLDGRALENGLVPTPDDGLTHEVELHFE 939 LK SY I+KP GF RM++ L +DG+ ++N ++P D H V L F+ Sbjct: 925 LKAPKCSYKFSITKPVGFARMESSEYELFVDGQKIDNTVIPMYTDEKEHIVTLKFK 980 >emb|CAB16926.1| cellobiose-phosphorylase [Thermotoga neapolitana] Length = 813 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 152/617 (24%), Positives = 253/617 (41%), Gaps = 82/617 (13%) Query: 348 ELHIPAGSSAAVDQLTGLVSDKSGAPWNDTVLADEVGA--LVARFSDRKAAESALAESSG 405 EL IP + + G V + W + ++ A ++ RF + E AL E Sbjct: 248 ELEIPPLGEKELIFILGYVENPEEEKWERPGVINKKRAKEMIERFKTGEDVERALKELKE 307 Query: 406 FVRDYGKFLQVFTGDENFDVFVNRNLPFQVFYQTFVSRSFCQTQKGY-REIGFREI-QDL 463 + + +QV T DE + VN +Q ++R+ + G R IGFR+ QD+ Sbjct: 308 YWDELLGRIQVETHDEKLNRMVNIWNQYQCMVTFNIARTSSYFESGISRGIGFRDSNQDI 367 Query: 464 YASMYYFTGMGQSALVKSLLKEWTGMVFELGYAYHNFFWAGKEP-----GKWSDDALWLV 518 ++ + ++ + + FE G YH F K+ G ++DD LWL+ Sbjct: 368 LGFVHMIPEKARQRIL-----DLASIQFEDGSTYHQFQPLTKKGNNEIGGGFNDDPLWLI 422 Query: 519 QAVYRYVMLTGDLEFLDESCPVAGQETSR-PVFETLKAVIVYSGWISVGRHGLPLLDYAD 577 + Y+ TGD L+E P + +FE LK ++ ++G HGLPL+ AD Sbjct: 423 LSTSAYIKETGDWSILNEEVPFDNDPDKKATLFEHLKRSFYFTV-NNLGPHGLPLIGRAD 481 Query: 578 WNDCLKLDDTYLNGPAKEERYRKQLQAGGVFGDPLDSDYSESVMNAFLLKVAVDELSILA 637 WNDCL L + + P +E ++ + A LD +ESV A L +A E + Sbjct: 482 WNDCLNL-NCFSKNP--DESFQTTVNA-------LDGRVAESVFIAGLFVLAGKEFVEIC 531 Query: 638 ARKGEQDYAAELDRFGAELRGRIQEHAWKDNFFARVLFNRYADGEYTYLGAAGDGLSSDP 697 R G +D A E ++ ++ E+ W +F R A G + S Sbjct: 532 RRLGLEDEAKEAEKHVKKMIETTLEYGWDGEWFLRA------------YDAFGRKVGSKE 579 Query: 698 AADGSYFLNSFSWSILSGCADE-AQITVMLDTMKSHLMTPYGLKLVSP------VALGRV 750 +G F+ +++G E LD++K HL T YGL L P + LG + Sbjct: 580 CEEGKIFIEPQGMCVMAGIGVENGYAKKALDSVKEHLDTHYGLVLQQPAYSRYYIELGEI 639 Query: 751 SSHTASDEYFPGDRENGGVFKHXXXXXXXX---------XFKGAKEVSDAGLA--AELGR 799 SS Y PG +EN G+F H F+ ++++ A L +E+ R Sbjct: 640 SS------YPPGYKENAGIFCHNNPWVAIAESVIGRGDRAFEIYRKITPAYLEDISEIHR 693 Query: 800 FGYWLLDRIMPFKTMEDPFAICGNPRFCTQYNNSETGENIGPMXXXXXXXXXXXXMEALG 859 ++ +++ K PR N+ TG LG Sbjct: 694 TEPYVYAQMVAGKDA---------PRHGEAKNSWLTG--------TAAWSFVAITQYILG 736 Query: 860 IEYTAQGIALNPILREEQTELSYTLKLGGSSYCIRISKPEGFRRMQNGTARLTLDGRALE 919 + T G+ ++P + E+ T + G++Y I + P + G + +DG+ +E Sbjct: 737 VRPTYDGLMVDPCIPEDWDGFKITRRFRGATYEITVKNP---HHVSKGVKEIIVDGKKIE 793 Query: 920 NGLVPTPDDGLTHEVEL 936 ++P +DG H VE+ Sbjct: 794 GQVLPVFNDGKVHRVEV 810 >gb|AAB95491.2| cellobiose phosphorylase [Thermotoga neapolitana] Length = 812 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 154/617 (24%), Positives = 254/617 (41%), Gaps = 83/617 (13%) Query: 348 ELHIPAGSSAAVDQLTGLVSDKSGAPWNDTVLADEVGA--LVARFSDRKAAESALAESSG 405 EL IP + + G V + W + ++ A ++ RF + E AL E Sbjct: 248 ELEIPPLGEKELIFILGYVENPEEEKWERPGVINKKRAKEMIERFKTGEDVERALKELKE 307 Query: 406 FVRDYGKFLQVFTGDENFDVFVNRNLPFQVFYQTFVSRSFCQTQKGY-REIGFREI-QDL 463 + + +QV T DE + VN +Q ++RS + G R IGFR+ QD+ Sbjct: 308 YWDELLGRIQVETHDEKLNR-VNIWNQYQCMVTFNIARSASYFESGISRGIGFRDSNQDI 366 Query: 464 YASMYYFTGMGQSALVKSLLKEWTGMVFELGYAYHNFFWAGKEP-----GKWSDDALWLV 518 ++ + ++ + + FE G YH F K+ G ++DD LWL+ Sbjct: 367 LGFVHMIPEKARQRIL-----DLASIQFEDGSTYHQFQPLTKKGNNEIGGGFNDDPLWLI 421 Query: 519 QAVYRYVMLTGDLEFLDESCPVAGQETSRP-VFETLKAVIVYSGWISVGRHGLPLLDYAD 577 + Y+ TGD L+E P + +FE LK ++ ++G HGLPL+ AD Sbjct: 422 LSTSAYIKETGDWSILNEEVPFDNDPDKKATLFEHLKRSFYFTV-NNLGPHGLPLIGRAD 480 Query: 578 WNDCLKLDDTYLNGPAKEERYRKQLQAGGVFGDPLDSDYSESVMNAFLLKVAVDELSILA 637 WNDCL L + + P +E ++ + A LD +ESV A L +A E + Sbjct: 481 WNDCLNL-NCFSKNP--DESFQTTVNA-------LDGRVAESVFIAGLFVLAGKEFVEIC 530 Query: 638 ARKGEQDYAAELDRFGAELRGRIQEHAWKDNFFARVLFNRYADGEYTYLGAAGDGLSSDP 697 R G +D A E ++ ++ E+ W +F R A G + S Sbjct: 531 RRLGLEDEAKEAEKHVKKMIETTLEYGWDGEWFLRA------------YDAFGRKVGSKE 578 Query: 698 AADGSYFLNSFSWSILSGCADE-AQITVMLDTMKSHLMTPYGLKLVSP------VALGRV 750 +G F+ +++G E LD++K HL TPYGL L P + LG + Sbjct: 579 CEEGKIFIEPQGMCVMAGIGVENGYAKKALDSVKEHLDTPYGLVLQQPAYSRYYIELGEI 638 Query: 751 SSHTASDEYFPGDRENGGVFKHXXXXXXXX---------XFKGAKEVSDAGLA--AELGR 799 SS Y PG +EN G+F H F+ ++++ A L +E+ R Sbjct: 639 SS------YPPGYKENAGIFCHNNPWVAIAETVIGRGDRAFEIYRKITPAYLEDISEIHR 692 Query: 800 FGYWLLDRIMPFKTMEDPFAICGNPRFCTQYNNSETGENIGPMXXXXXXXXXXXXMEALG 859 ++ +++ K PR N+ TG LG Sbjct: 693 TEPYVYAQMVAGKDA---------PRHGEAKNSWLTG--------TAAWSFVAITQYILG 735 Query: 860 IEYTAQGIALNPILREEQTELSYTLKLGGSSYCIRISKPEGFRRMQNGTARLTLDGRALE 919 + T G+ ++P + E+ T + G++Y I + P + G + +DG+ +E Sbjct: 736 VRPTYDGLMVDPCIPEDWDGFKITRRFRGATYEITVKNP---HHVSKGVKEIIVDGKKIE 792 Query: 920 NGLVPTPDDGLTHEVEL 936 ++P +DG H VE+ Sbjct: 793 GQVLPVFNDGKVHRVEV 809 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.137 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,408,925,822 Number of extensions: 61271953 Number of successful extensions: 119450 Number of sequences better than 1.0e-05: 32 Number of HSP's gapped: 119397 Number of HSP's successfully gapped: 35 Length of query: 940 Length of database: 757,237,578 Length adjustment: 135 Effective length of query: 805 Effective length of database: 390,699,213 Effective search space: 314512866465 Effective search space used: 314512866465 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)