BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0280.0030.p (176 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_243268.1| dipicolinate synthase subunit B [Bacillus halod... 224 7e-58 ref|ZP_00180540.1| hypothetical protein Mther144701 [Moorella th... 223 1e-57 ref|NP_833522.1| Dipicolinate synthase, B chain [Bacillus cereus... 220 9e-57 ref|NP_657770.1| Flavoprotein, Flavoprotein [Bacillus anthracis ... 219 1e-56 ref|NP_980136.1| dipicolinate synthase, B subunit [Bacillus cere... 219 2e-56 >ref|NP_243268.1| dipicolinate synthase subunit B [Bacillus halodurans] pir||B83950 dipicolinate synthase subunit B spoVFB [imported] - Bacillus halodurans (strain C-125) dbj|BAB06121.1| dipicolinate synthase subunit B [Bacillus halodurans] Length = 197 Score = 224 bits (571), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 103/174 (59%), Positives = 133/174 (76%) Query: 1 MPQIQRFMEGGANVVPIVSASVLNTDTRFGTSENWLKQLKEITGNDIISTIVEAEPLGPS 60 +PQ++R +E GA V P V+ +V TDT+FG S W+ ++K+IT I+ ++V+AEP GP Sbjct: 23 LPQMERLVELGAKVTPFVTHTVQTTDTKFGESSEWINKIKQITEEPIVDSMVKAEPFGPK 82 Query: 61 KLLDVLTIAPCTGNTTSKLANAMTDSPVLMAAKAQLRNSRPLVLAISTNDGLGLNAANIA 120 LD + IAP TGN+TSK ANAMTDSPVLM AKA LRN +P+V+ ISTND LGLN NI Sbjct: 83 TPLDCMVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIM 142 Query: 121 KLLVAKNIYFVPFGQDNPQGKPNSLVAQMDLIPEACFAALQGQQLQPMIIERFH 174 +L+ KNIYF+PFGQDNPQ KPNSLVA+M+ +PE AAL+GQQ QP++IE+F Sbjct: 143 RLMATKNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRGQQYQPVLIEKFR 196 >ref|ZP_00180540.1| hypothetical protein Mther144701 [Moorella thermoacetica ATCC 39073] Length = 202 Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 102/170 (60%), Positives = 136/170 (80%) Query: 1 MPQIQRFMEGGANVVPIVSASVLNTDTRFGTSENWLKQLKEITGNDIISTIVEAEPLGPS 60 MP++ R + GA VVPI+S +V ++DTR+GTS W +++ ITG+ I TIV AEP+GP Sbjct: 22 MPELARVIAEGAEVVPIISPAVRDSDTRYGTSSYWRAEVERITGHKAIDTIVAAEPIGPQ 81 Query: 61 KLLDVLTIAPCTGNTTSKLANAMTDSPVLMAAKAQLRNSRPLVLAISTNDGLGLNAANIA 120 KL D+L IAPCTGNT +KLAN +TD+PVLMAAKAQLRN RP+VLAI++NDGLG NA N+ Sbjct: 82 KLFDILVIAPCTGNTLAKLANGITDTPVLMAAKAQLRNLRPVVLAIASNDGLGANAVNLG 141 Query: 121 KLLVAKNIYFVPFGQDNPQGKPNSLVAQMDLIPEACFAALQGQQLQPMII 170 +++ KNIY VPFGQD+P+ KPNSLVA+MDL+ AAL+G+Q+QP+++ Sbjct: 142 RIMNTKNIYLVPFGQDDPEKKPNSLVARMDLLVATIVAALEGRQIQPVLM 191 >ref|NP_833522.1| Dipicolinate synthase, B chain [Bacillus cereus ATCC 14579] gb|AAP10723.1| Dipicolinate synthase, B chain [Bacillus cereus ATCC 14579] Length = 199 Score = 220 bits (561), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 101/174 (58%), Positives = 134/174 (77%) Query: 1 MPQIQRFMEGGANVVPIVSASVLNTDTRFGTSENWLKQLKEITGNDIISTIVEAEPLGPS 60 MP +++ + GA V P+VS +V +T+TRFG W+K+++EITG I++IV AEPLGP Sbjct: 23 MPHLEKLIAEGAEVRPVVSYTVQSTNTRFGEGAEWIKKIEEITGFKAINSIVGAEPLGPK 82 Query: 61 KLLDVLTIAPCTGNTTSKLANAMTDSPVLMAAKAQLRNSRPLVLAISTNDGLGLNAANIA 120 LD + IAP TGN+ SK ANAMTDSPVLMAAKA LRN +P+VLA+STND LGLN N+ Sbjct: 83 IPLDCMVIAPLTGNSMSKFANAMTDSPVLMAAKATLRNGKPVVLAVSTNDALGLNGVNLM 142 Query: 121 KLLVAKNIYFVPFGQDNPQGKPNSLVAQMDLIPEACFAALQGQQLQPMIIERFH 174 +L+ KNIYFVPFGQD P+ KPNS+VA+M+L+ + ALQG+QLQP+++E+F Sbjct: 143 RLMATKNIYFVPFGQDAPEKKPNSMVARMELLEDTVLEALQGKQLQPVVVEKFR 196 >ref|NP_657770.1| Flavoprotein, Flavoprotein [Bacillus anthracis A2012] ref|NP_846182.1| dipicolinate synthase, B subunit [Bacillus anthracis str. Ames] gb|AAP27668.1| dipicolinate synthase, B subunit [Bacillus anthracis str. Ames] Length = 199 Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 100/174 (57%), Positives = 134/174 (77%) Query: 1 MPQIQRFMEGGANVVPIVSASVLNTDTRFGTSENWLKQLKEITGNDIISTIVEAEPLGPS 60 MP +++ + GA V P+VS +V +T+TRFG W+K+++E+TG I++IV AEPLGP Sbjct: 23 MPHLEKLIAEGAEVRPVVSYTVQSTNTRFGEGTEWIKKIEEVTGFKAINSIVGAEPLGPK 82 Query: 61 KLLDVLTIAPCTGNTTSKLANAMTDSPVLMAAKAQLRNSRPLVLAISTNDGLGLNAANIA 120 LD + IAP TGN+ SK ANAMTDSPVLMAAKA LRN +P+VLA+STND LGLN N+ Sbjct: 83 IPLDCMVIAPLTGNSMSKFANAMTDSPVLMAAKATLRNGKPVVLAVSTNDALGLNGVNLM 142 Query: 121 KLLVAKNIYFVPFGQDNPQGKPNSLVAQMDLIPEACFAALQGQQLQPMIIERFH 174 +L+ KNIYFVPFGQD P+ KPNS+VA+M+L+ + ALQG+QLQP+++E+F Sbjct: 143 RLMATKNIYFVPFGQDAPEKKPNSMVARMELLEDTVLEALQGKQLQPVVVEKFR 196 >ref|NP_980136.1| dipicolinate synthase, B subunit [Bacillus cereus ATCC 10987] gb|AAS42744.1| dipicolinate synthase, B subunit [Bacillus cereus ATCC 10987] Length = 199 Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 100/174 (57%), Positives = 134/174 (77%) Query: 1 MPQIQRFMEGGANVVPIVSASVLNTDTRFGTSENWLKQLKEITGNDIISTIVEAEPLGPS 60 MP +++ + GA V P+VS +V +T+TRFG W+K+++E+TG I++IV AEPLGP Sbjct: 23 MPHLEKLIAEGAEVRPVVSYTVQSTNTRFGEGAEWIKKIEEVTGFKAINSIVGAEPLGPK 82 Query: 61 KLLDVLTIAPCTGNTTSKLANAMTDSPVLMAAKAQLRNSRPLVLAISTNDGLGLNAANIA 120 LD + IAP TGN+ SK ANAMTDSPVLMAAKA LRN +P+VLA+STND LGLN N+ Sbjct: 83 IPLDCMVIAPLTGNSMSKFANAMTDSPVLMAAKATLRNGKPVVLAVSTNDALGLNGVNLM 142 Query: 121 KLLVAKNIYFVPFGQDNPQGKPNSLVAQMDLIPEACFAALQGQQLQPMIIERFH 174 +L+ KNIYFVPFGQD P+ KPNS+VA+M+L+ + ALQG+QLQP+++E+F Sbjct: 143 RLMATKNIYFVPFGQDAPEKKPNSMVARMELLEDTVLEALQGKQLQPVVVEKFR 196 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.132 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 247,046,606 Number of extensions: 9278690 Number of successful extensions: 23533 Number of sequences better than 1.0e-05: 9 Number of HSP's gapped: 23544 Number of HSP's successfully gapped: 9 Length of query: 176 Length of database: 757,237,578 Length adjustment: 117 Effective length of query: 59 Effective length of database: 439,570,995 Effective search space: 25934688705 Effective search space used: 25934688705 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 121 (51.2 bits)