BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0280.0029.p (411 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_833520.1| Aspartokinase [Bacillus cereus ATCC 14579] >gi|... 450 e-125 ref|NP_846180.1| aspartate kinase, monofunctional class [Bacillu... 450 e-125 ref|NP_980134.1| aspartate kinase, monofunctional class [Bacillu... 449 e-125 ref|NP_657768.1| aakinase, Amino acid kinase family [Bacillus an... 449 e-125 ref|NP_692532.1| aspartate kinase I [Oceanobacillus iheyensis HT... 429 e-119 >ref|NP_833520.1| Aspartokinase [Bacillus cereus ATCC 14579] gb|AAP10721.1| Aspartokinase [Bacillus cereus ATCC 14579] Length = 410 Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust. Identities = 221/406 (54%), Positives = 291/406 (71%), Gaps = 2/406 (0%) Query: 6 MGILVQKFGGTSLSTPAAREHVIRHVKRELASGFSLVVVVSAMGRKGEPYATDTLLDWAV 65 M I+VQKFGGTS+ R+H + H+K+ LA+G+ +V VVSAMGRKGEPYATDTLL Sbjct: 1 MKIIVQKFGGTSVRDDNGRKHALHHIKKSLAAGYKVVTVVSAMGRKGEPYATDTLLSLVN 60 Query: 66 QNGDALPSREKDLLMCCGEIISATTLCGLLEHEGVPATVLTGAQAGFLTDNNYGNARILD 125 Q + RE+DLL+ CGE+ISA +L G+ A L GAQAGF+T++++ NA+I++ Sbjct: 61 QEESTISKREQDLLLSCGELISAIVFSNMLNENGIKAAALNGAQAGFVTNDDFTNAKIIE 120 Query: 126 VRTERILRELREHKVVIVTGFQGQTEAGDFTTLGRGGSDTSATALGAALRADMVDIYTDV 185 + +RI EL V++VTGFQGQT+ GD TTLGRGGSDTSA+ALG AL A+ +DI+TDV Sbjct: 121 MNCDRIHEELENVDVIVVTGFQGQTKKGDTTTLGRGGSDTSASALGVALHAEYIDIFTDV 180 Query: 186 DGILTADPRIVEDAKQLSYVSYTEICNMAYQGAKVIHPRAVEIAMQAQIPVRVRSTFSEA 245 +G++TADPRIV+DA+ L V+Y EICNMAYQGAKV+HPRAVEIAM A++P+RVRST+S++ Sbjct: 181 EGVMTADPRIVKDARHLQTVTYNEICNMAYQGAKVVHPRAVEIAMHAKVPLRVRSTYSDS 240 Query: 246 EGTLVTHPEGFSDVSHGVVDRFVTGIAYVSNVTQISVECPEGNGTGVQLQIFKSMADNGI 305 EGTL++ +G + V +R VTGIA+VSNVTQI V E +Q +FK MA+ GI Sbjct: 241 EGTLISAYDGATR-GRDVEERPVTGIAHVSNVTQIKVLAKE-TAYDLQQHVFKEMANEGI 298 Query: 306 SVDFINVTPTEALYTVNDDKSEQAIAALQELGLRPSSLSGCAKXXXXXXXXXXXXXXMAR 365 SVD IN++PT YTV+D+ S A+ LQ LG P CAK A+ Sbjct: 299 SVDLINISPTGVAYTVSDNVSSHAVKLLQNLGYEPIVTEHCAKVSIVGAGMAGYPGVTAK 358 Query: 366 IVEALSSQNIQILQSADSNTTIWVLVKKEDMVQSLRALHAKFELHR 411 IV AL+ + IQILQSADS+TTIWVLVK+ D+V+++ ALH+ FEL + Sbjct: 359 IVTALAEKGIQILQSADSHTTIWVLVKETDLVEAVNALHSAFELSK 404 >ref|NP_846180.1| aspartate kinase, monofunctional class [Bacillus anthracis str. Ames] gb|AAP27666.1| aspartate kinase, monofunctional class [Bacillus anthracis str. Ames] Length = 410 Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust. Identities = 220/406 (54%), Positives = 292/406 (71%), Gaps = 2/406 (0%) Query: 6 MGILVQKFGGTSLSTPAAREHVIRHVKRELASGFSLVVVVSAMGRKGEPYATDTLLDWAV 65 M I+VQKFGGTS+ R+H + H+K+ L +G+ +V VVSAMGRKGEPYATDTLL Sbjct: 1 MKIIVQKFGGTSVRDENGRKHALHHIKKSLDAGYKVVTVVSAMGRKGEPYATDTLLSLVN 60 Query: 66 QNGDALPSREKDLLMCCGEIISATTLCGLLEHEGVPATVLTGAQAGFLTDNNYGNARILD 125 Q + +RE+DLL+ CGE+ISA +L G+ A L GAQAGF+T++++ NA+I++ Sbjct: 61 QEESHISNREQDLLLSCGELISAIVFSNMLNENGIKAAALNGAQAGFVTNDDFTNAKIIE 120 Query: 126 VRTERILRELREHKVVIVTGFQGQTEAGDFTTLGRGGSDTSATALGAALRADMVDIYTDV 185 + +RI EL V++VTGFQGQT+ GD TTLGRGGSDTSA+ALG AL A+ +DI+TDV Sbjct: 121 MNCDRIHEELENVDVIVVTGFQGQTKKGDTTTLGRGGSDTSASALGVALHAEYIDIFTDV 180 Query: 186 DGILTADPRIVEDAKQLSYVSYTEICNMAYQGAKVIHPRAVEIAMQAQIPVRVRSTFSEA 245 +G++TADPRIV+DA+ L V+Y EICNMAYQGAKV+HPRAVEIAM A++P+RVRST+S++ Sbjct: 181 EGVMTADPRIVKDARHLQTVTYNEICNMAYQGAKVVHPRAVEIAMHAKVPLRVRSTYSDS 240 Query: 246 EGTLVTHPEGFSDVSHGVVDRFVTGIAYVSNVTQISVECPEGNGTGVQLQIFKSMADNGI 305 EGTL+ +G + V +R VTGIA+VSNVTQI V E +Q +FK MA+ GI Sbjct: 241 EGTLIAAYDGATK-GQDVEERPVTGIAHVSNVTQIKVLAKE-TAYDIQQHVFKEMANEGI 298 Query: 306 SVDFINVTPTEALYTVNDDKSEQAIAALQELGLRPSSLSGCAKXXXXXXXXXXXXXXMAR 365 SVD IN++PT YTVND+ S +A+ L++LG P CAK A+ Sbjct: 299 SVDLINISPTGVAYTVNDNVSARAVEVLKQLGYEPIVTEHCAKVSIVGAGMAGIPGVTAK 358 Query: 366 IVEALSSQNIQILQSADSNTTIWVLVKKEDMVQSLRALHAKFELHR 411 IV AL+ + IQILQSADS+TTIWVLVK+ D+V+++ ALH+ FEL + Sbjct: 359 IVTALAEKGIQILQSADSHTTIWVLVKETDLVEAVNALHSAFELSK 404 >ref|NP_980134.1| aspartate kinase, monofunctional class [Bacillus cereus ATCC 10987] gb|AAS42742.1| aspartate kinase, monofunctional class [Bacillus cereus ATCC 10987] Length = 410 Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust. Identities = 220/406 (54%), Positives = 292/406 (71%), Gaps = 2/406 (0%) Query: 6 MGILVQKFGGTSLSTPAAREHVIRHVKRELASGFSLVVVVSAMGRKGEPYATDTLLDWAV 65 M I+VQKFGGTS+ R+H + H+K+ L +G+ +V VVSAMGRKGEPYATDTLL Sbjct: 1 MKIIVQKFGGTSVRDENGRKHALHHIKKSLDAGYKVVTVVSAMGRKGEPYATDTLLSLVN 60 Query: 66 QNGDALPSREKDLLMCCGEIISATTLCGLLEHEGVPATVLTGAQAGFLTDNNYGNARILD 125 Q + +RE+DLL+ CGE+ISA +L G+ A L GAQAGF+T++++ NA+I++ Sbjct: 61 QEESHISNREQDLLLSCGELISAIVFSNMLNENGIKAAALNGAQAGFVTNDDFTNAKIIE 120 Query: 126 VRTERILRELREHKVVIVTGFQGQTEAGDFTTLGRGGSDTSATALGAALRADMVDIYTDV 185 + +RI EL V++VTGFQGQT+ GD TTLGRGGSDTSA+ALG AL A+ +DI+TDV Sbjct: 121 MNCDRIHEELENVDVIVVTGFQGQTKKGDTTTLGRGGSDTSASALGVALHAEYIDIFTDV 180 Query: 186 DGILTADPRIVEDAKQLSYVSYTEICNMAYQGAKVIHPRAVEIAMQAQIPVRVRSTFSEA 245 +G++TADPRIV+DA+ L V+Y EICNMAYQGAKV+HPRAVEIAM A++P+RVRST+S++ Sbjct: 181 EGVMTADPRIVKDARHLQTVTYNEICNMAYQGAKVVHPRAVEIAMHAKVPLRVRSTYSDS 240 Query: 246 EGTLVTHPEGFSDVSHGVVDRFVTGIAYVSNVTQISVECPEGNGTGVQLQIFKSMADNGI 305 EGTL++ +G + V +R VTGIA+VSNVTQI V E +Q +FK MA+ GI Sbjct: 241 EGTLISASDGATK-GRDVEERPVTGIAHVSNVTQIKVLAKE-TAYDLQQHVFKEMANEGI 298 Query: 306 SVDFINVTPTEALYTVNDDKSEQAIAALQELGLRPSSLSGCAKXXXXXXXXXXXXXXMAR 365 SVD IN++PT YTV+D+ S +A+ LQ LG P CAK A+ Sbjct: 299 SVDLINISPTGVAYTVSDNVSNRAVELLQNLGYEPIVTEHCAKVSIVGAGMAGYPGVTAK 358 Query: 366 IVEALSSQNIQILQSADSNTTIWVLVKKEDMVQSLRALHAKFELHR 411 IV AL+ + IQILQSADS+TTIWVLVK+ D+V+++ ALH+ FEL + Sbjct: 359 IVTALAEKGIQILQSADSHTTIWVLVKETDLVEAVNALHSAFELSK 404 >ref|NP_657768.1| aakinase, Amino acid kinase family [Bacillus anthracis A2012] Length = 407 Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust. Identities = 220/406 (54%), Positives = 291/406 (71%), Gaps = 2/406 (0%) Query: 6 MGILVQKFGGTSLSTPAAREHVIRHVKRELASGFSLVVVVSAMGRKGEPYATDTLLDWAV 65 M I+VQKFGGTS+ R+H + H+K+ L +G+ +V VVSAMGRKGEPYATDTLL Sbjct: 1 MKIIVQKFGGTSVRDENGRKHALHHIKKSLDAGYKVVTVVSAMGRKGEPYATDTLLSLVN 60 Query: 66 QNGDALPSREKDLLMCCGEIISATTLCGLLEHEGVPATVLTGAQAGFLTDNNYGNARILD 125 Q + +RE+DLL+ CGE+ISA +L G+ A L GAQAGF+T++++ NA+I++ Sbjct: 61 QEESHISNREQDLLLSCGELISAIVFSNMLNENGIKAAALNGAQAGFVTNDDFTNAKIIE 120 Query: 126 VRTERILRELREHKVVIVTGFQGQTEAGDFTTLGRGGSDTSATALGAALRADMVDIYTDV 185 + +RI EL V++VTGFQGQT+ GD TTLGRGGSDTSA+ALG AL A+ +DI+TDV Sbjct: 121 MNCDRIHEELENVDVIVVTGFQGQTKKGDTTTLGRGGSDTSASALGVALHAEYIDIFTDV 180 Query: 186 DGILTADPRIVEDAKQLSYVSYTEICNMAYQGAKVIHPRAVEIAMQAQIPVRVRSTFSEA 245 +G++TADPRIV+DA+ L V+Y EICNMAYQGAKV+HPRAVEIAM A++P+RVRST+S++ Sbjct: 181 EGVMTADPRIVKDARHLQTVTYNEICNMAYQGAKVVHPRAVEIAMHAKVPLRVRSTYSDS 240 Query: 246 EGTLVTHPEGFSDVSHGVVDRFVTGIAYVSNVTQISVECPEGNGTGVQLQIFKSMADNGI 305 EGTL+ +G + V +R VTGIA+VSNVTQI V E +Q +FK MA+ GI Sbjct: 241 EGTLIAAYDGATK-GQDVEERPVTGIAHVSNVTQIKVLAKE-TAYDIQQHVFKEMANEGI 298 Query: 306 SVDFINVTPTEALYTVNDDKSEQAIAALQELGLRPSSLSGCAKXXXXXXXXXXXXXXMAR 365 SVD IN++PT YTVND+ S +A+ L++LG P CAK A+ Sbjct: 299 SVDLINISPTGVAYTVNDNVSARAVEVLKQLGYEPIVTEHCAKVSIVGAGMAGIPGVTAK 358 Query: 366 IVEALSSQNIQILQSADSNTTIWVLVKKEDMVQSLRALHAKFELHR 411 IV AL+ + IQILQSADS+TTIWVLVK+ D+V+++ ALH FEL + Sbjct: 359 IVTALAEKGIQILQSADSHTTIWVLVKETDLVEAVNALHRAFELSK 404 >ref|NP_692532.1| aspartate kinase I [Oceanobacillus iheyensis HTE831] dbj|BAC13567.1| aspartate kinase I [Oceanobacillus iheyensis HTE831] Length = 411 Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust. Identities = 214/404 (52%), Positives = 286/404 (70%), Gaps = 2/404 (0%) Query: 6 MGILVQKFGGTSLSTPAAREHVIRHVKRELASGFSLVVVVSAMGRKGEPYATDTLLDWAV 65 M ++VQKFGGTS+ + REHVIRH++ L + LVVVVSA+GRK +PYATD+LL Sbjct: 1 MQVMVQKFGGTSVQSSENREHVIRHIREALVQEYKLVVVVSALGRKPDPYATDSLLGLVD 60 Query: 66 QNGDALPSREKDLLMCCGEIISATTLCGLLEHEGVPATVLTGAQAGFLTDNNYGNARILD 125 + SRE DLLM CGE+IS+ L L+ + A LTGAQAGF+T+ ++ A+I + Sbjct: 61 FPTNTNSSRELDLLMSCGEVISSVVLSNELQKNHISAVALTGAQAGFVTNEDFNRAKIKE 120 Query: 126 VRTERILRELREHKVVIVTGFQGQTEAGDFTTLGRGGSDTSATALGAALRADMVDIYTDV 185 V RIL+EL H VV+V GFQGQ+E+G+ TT+GRGGSDTSA ALG AL A+ ++I+TDV Sbjct: 121 VNPTRILKELETHDVVVVAGFQGQSESGEITTIGRGGSDTSAAALGVALSAERIEIFTDV 180 Query: 186 DGILTADPRIVEDAKQLSYVSYTEICNMAYQGAKVIHPRAVEIAMQAQIPVRVRSTFSEA 245 +GI+TADPR+V++A+ L V+YTEICN+AYQGAKVIHPRAVEIAMQ +IP+R+RST+SE Sbjct: 181 EGIMTADPRVVKNARPLDVVTYTEICNLAYQGAKVIHPRAVEIAMQGKIPMRIRSTYSEQ 240 Query: 246 EGTLVTHPEGFSDVSHGVVDRFVTGIAYVSNVTQISVECPEGNGTGVQLQIFKSMADNGI 305 GTLVT ++ + DR +TGIA++S VTQI V+ E + VQ ++FK+MA+ GI Sbjct: 241 LGTLVTSSR-VHELGMDIPDRMITGIAHISPVTQIKVQTKE-SAYRVQSEVFKAMAEAGI 298 Query: 306 SVDFINVTPTEALYTVNDDKSEQAIAALQELGLRPSSLSGCAKXXXXXXXXXXXXXXMAR 365 SVDFIN++PT +YTV D + +AI L+ LG P GCAK ++ Sbjct: 299 SVDFINISPTGVVYTVPDTLTTKAIEILEMLGFHPEVTKGCAKVSAVGAGMSGVPGVASK 358 Query: 366 IVEALSSQNIQILQSADSNTTIWVLVKKEDMVQSLRALHAKFEL 409 IV+AL+ +QILQSADS+TTIWVLV +D++ ++ ALH F L Sbjct: 359 IVQALTDSGVQILQSADSHTTIWVLVHNDDLITAVNALHDVFGL 402 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.133 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 543,199,741 Number of extensions: 21014782 Number of successful extensions: 56332 Number of sequences better than 1.0e-05: 854 Number of HSP's gapped: 55459 Number of HSP's successfully gapped: 854 Length of query: 411 Length of database: 757,237,578 Length adjustment: 128 Effective length of query: 283 Effective length of database: 409,704,906 Effective search space: 115946488398 Effective search space used: 115946488398 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 127 (53.5 bits)