BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0276.0004.p (156 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_834493.1| Carbonic anhydrase [Bacillus cereus ATCC 14579]... 210 7e-54 ref|NP_981241.1| carbonic anhydrase, prokaryotic type, putative ... 209 1e-53 ref|NP_658826.1| hypothetical protein predicted by GeneMark [Bac... 209 2e-53 ref|NP_391347.1| similar to carbonic anhydrase [Bacillus subtili... 206 2e-52 ref|NP_390947.1| similar to carbonic anhydrase [Bacillus subtili... 204 7e-52 >ref|NP_834493.1| Carbonic anhydrase [Bacillus cereus ATCC 14579] gb|AAP11694.1| Carbonic anhydrase [Bacillus cereus ATCC 14579] Length = 187 Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 97/153 (63%), Positives = 124/153 (81%) Query: 1 MLIITCMDTRLVELLPKAMNFKNGDVKIIKNAGAVISQPFGSVMRSVMVALYELDADEVI 60 M+II+CMDTRLVELLPKAMN +NGDVKIIK AGAVIS PFGS+MRS++VA+YEL ADEV Sbjct: 33 MVIISCMDTRLVELLPKAMNMRNGDVKIIKVAGAVISHPFGSIMRSILVAVYELGADEVC 92 Query: 61 VVGHYECGMASLNADRMINSIKERGVSDEVLSTLENSGIKLTKWLRGFDNVEEGVIQTVE 120 VVGH++CGMA + A I +KERG+++E L TL SGI L ++L+GF +VEE V +V Sbjct: 93 VVGHHDCGMAKIQASSTIEKMKERGITNEKLDTLRYSGIDLERFLQGFSSVEESVEHSVS 152 Query: 121 LIKRHPLLPPNVPIHGMIIDPATGALELVSDGY 153 +++ HPLLP VP+HG++IDP TG L+LV +GY Sbjct: 153 ILRNHPLLPEEVPVHGLVIDPETGKLDLVVNGY 185 >ref|NP_981241.1| carbonic anhydrase, prokaryotic type, putative [Bacillus cereus ATCC 10987] gb|AAS43849.1| carbonic anhydrase, prokaryotic type, putative [Bacillus cereus ATCC 10987] Length = 187 Score = 209 bits (533), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 97/153 (63%), Positives = 123/153 (80%) Query: 1 MLIITCMDTRLVELLPKAMNFKNGDVKIIKNAGAVISQPFGSVMRSVMVALYELDADEVI 60 M+II+CMDTRLVELLPKAMN +NGDVKIIK AGAVIS PFGS+MRS++VA+YEL ADEV Sbjct: 33 MVIISCMDTRLVELLPKAMNMRNGDVKIIKVAGAVISHPFGSIMRSILVAVYELGADEVC 92 Query: 61 VVGHYECGMASLNADRMINSIKERGVSDEVLSTLENSGIKLTKWLRGFDNVEEGVIQTVE 120 VVGH++CGMA + A I +KERG+++E L L SGI L ++LRGF +VEE V +V Sbjct: 93 VVGHHDCGMAKIQASSTIEKMKERGITEEKLDMLRYSGIDLEQFLRGFSSVEESVEHSVS 152 Query: 121 LIKRHPLLPPNVPIHGMIIDPATGALELVSDGY 153 +++ HPLLP VP+HG++IDP TG L+LV +GY Sbjct: 153 VLRNHPLLPEEVPVHGLVIDPDTGKLDLVVNGY 185 >ref|NP_658826.1| hypothetical protein predicted by GeneMark [Bacillus anthracis A2012] ref|NP_847240.1| carbonic anhydrase, prokaryotic type, putative [Bacillus anthracis str. Ames] gb|AAP28726.1| carbonic anhydrase, prokaryotic type, putative [Bacillus anthracis str. Ames] Length = 187 Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 97/153 (63%), Positives = 123/153 (80%) Query: 1 MLIITCMDTRLVELLPKAMNFKNGDVKIIKNAGAVISQPFGSVMRSVMVALYELDADEVI 60 M+II+CMDTRLVELLPKAMN +NGDVKIIK AGAVIS PFGS+MRS++VA+YEL ADEV Sbjct: 33 MVIISCMDTRLVELLPKAMNMRNGDVKIIKVAGAVISHPFGSIMRSILVAVYELGADEVC 92 Query: 61 VVGHYECGMASLNADRMINSIKERGVSDEVLSTLENSGIKLTKWLRGFDNVEEGVIQTVE 120 VVGH++CGMA + A I +KERG+++E L L SGI L ++LRGF +VEE V +V Sbjct: 93 VVGHHDCGMAKIQASSTIEKMKERGITEEKLDMLRYSGIDLEQFLRGFSSVEESVEHSVS 152 Query: 121 LIKRHPLLPPNVPIHGMIIDPATGALELVSDGY 153 +++ HPLLP VP+HG++IDP TG L+LV +GY Sbjct: 153 VLRNHPLLPEEVPVHGLVIDPDTGKLDLVVNGY 185 >ref|NP_391347.1| similar to carbonic anhydrase [Bacillus subtilis] pir||A70033 carbonic anhydrase homolog yvdA - Bacillus subtilis emb|CAB08067.1| hypothetical protein [Bacillus subtilis] emb|CAB15472.1| yvdA [Bacillus subtilis subsp. subtilis str. 168] Length = 197 Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 90/153 (58%), Positives = 119/153 (77%) Query: 1 MLIITCMDTRLVELLPKAMNFKNGDVKIIKNAGAVISQPFGSVMRSVMVALYELDADEVI 60 ++I+TCMDTRL ELLP+AM KNGD KI+KNAGA++S PFGSVMRS++VA+YEL A+EV Sbjct: 36 LVIVTCMDTRLTELLPQAMGLKNGDAKIVKNAGAIVSHPFGSVMRSILVAIYELQAEEVC 95 Query: 61 VVGHYECGMASLNADRMINSIKERGVSDEVLSTLENSGIKLTKWLRGFDNVEEGVIQTVE 120 +VGH+ECGM+ LNA ++ KERGV D L+ L ++G+ L WL GF +VEE V +V Sbjct: 96 IVGHHECGMSGLNASSILEKAKERGVEDSCLNLLTSAGLDLKTWLTGFHSVEESVSHSVN 155 Query: 121 LIKRHPLLPPNVPIHGMIIDPATGALELVSDGY 153 +IK HPLLP VP+HG++I P TG L++V +GY Sbjct: 156 MIKNHPLLPKKVPVHGLVIHPETGKLDVVINGY 188 >ref|NP_390947.1| similar to carbonic anhydrase [Bacillus subtilis] pir||F69993 carbonic anhydrase homolog ytiB - Bacillus subtilis gb|AAC00234.1| YtiB [Bacillus subtilis] emb|CAB15047.1| ytiB [Bacillus subtilis subsp. subtilis str. 168] Length = 187 Score = 204 bits (518), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 85/153 (55%), Positives = 123/153 (80%) Query: 1 MLIITCMDTRLVELLPKAMNFKNGDVKIIKNAGAVISQPFGSVMRSVMVALYELDADEVI 60 M I++CMDTRLVELLP AMN +NGDVKIIK+AGA+++ PFGS+MRS++VA+YEL+ADEV Sbjct: 33 MAILSCMDTRLVELLPHAMNLRNGDVKIIKSAGALVTHPFGSIMRSILVAVYELNADEVC 92 Query: 61 VVGHYECGMASLNADRMINSIKERGVSDEVLSTLENSGIKLTKWLRGFDNVEEGVIQTVE 120 V+GH++CGM+ +++ M+ IK RG+ +E + T++ SG+ +W + FD+VE V +V+ Sbjct: 93 VIGHHDCGMSKISSKSMLEKIKARGIPEERIETIKYSGVDFDQWFKSFDSVEASVKDSVD 152 Query: 121 LIKRHPLLPPNVPIHGMIIDPATGALELVSDGY 153 +IK HPL P NVP+HG++IDP TG L+L+ +GY Sbjct: 153 VIKHHPLFPENVPVHGLVIDPKTGKLDLIVNGY 185 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.137 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 226,712,902 Number of extensions: 8626647 Number of successful extensions: 23680 Number of sequences better than 1.0e-05: 42 Number of HSP's gapped: 23644 Number of HSP's successfully gapped: 42 Length of query: 156 Length of database: 757,237,578 Length adjustment: 114 Effective length of query: 42 Effective length of database: 447,716,292 Effective search space: 18804084264 Effective search space used: 18804084264 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 120 (50.8 bits)