BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0273.0003.p (219 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00184451.1| hypothetical protein Exigu015901 [Exiguobacte... 258 6e-68 ref|NP_926755.1| hypothetical protein glr3809 [Gloeobacter viola... 214 1e-54 ref|NP_436745.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium m... 184 1e-45 gb|EAK14882.1| unknown [environmental sequence] 183 2e-45 gb|EAA56028.1| hypothetical protein MG01679.4 [Magnaporthe grise... 182 6e-45 >ref|ZP_00184451.1| hypothetical protein Exigu015901 [Exiguobacterium sp. 255-15] Length = 220 Score = 258 bits (659), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 128/219 (58%), Positives = 159/219 (72%), Gaps = 1/219 (0%) Query: 1 MAKKVLIVVTNHTEIHEGRPTGIWLSEFAEAYMGFISQGYEVLVASPLGGQAPVDPGSVD 60 M+K VL+VVTN +E+ EG TGIWLSEF EAY+ F +GY + VASP GG +P+D S++ Sbjct: 1 MSKHVLMVVTNASEMKEGHATGIWLSEFGEAYVAFQKEGYTITVASPNGGLSPIDARSLE 60 Query: 61 DHTAQEILDTQKYLENTIKLDEVS-AENFDAIFLPGGHGTMYDLPDNQALQKLLRDFYEA 119 D +I T LENT+ L+ +S FDAIF+PGGHGTM+DLP + AL LR +EA Sbjct: 61 DEVPADIQATAPLLENTLDLESISDFSAFDAIFMPGGHGTMFDLPHSDALNHALRTLFEA 120 Query: 120 DKIVAAVCHGPAGLVGATLSSGQPLVAGKRVNAFTDREEADTTLDKHLPFLLESKLRDLG 179 K VAAVCHGPAGLV ATL+ G PLVAGK + FTD EE T LD ++PFLLE++LR+LG Sbjct: 121 GKTVAAVCHGPAGLVSATLTDGTPLVAGKTIATFTDEEERATGLDIYMPFLLETRLRELG 180 Query: 180 AIYVAAPNWTSHVEVDGNLITGQNPQSTVAVTEAVIAKL 218 A + A N+T + +VDGNL+TGQNPQSTVAV AVI L Sbjct: 181 ANIIVADNFTENFQVDGNLVTGQNPQSTVAVANAVIKTL 219 >ref|NP_926755.1| hypothetical protein glr3809 [Gloeobacter violaceus] dbj|BAC91750.1| glr3809 [Gloeobacter violaceus PCC 7421] Length = 526 Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 108/223 (48%), Positives = 146/223 (65%), Gaps = 7/223 (3%) Query: 1 MAKKVLIVVTNHTEIH--EGRPTGIWLSEFAEAYMGFISQGYEVLVASPLGGQAPVDPGS 58 M K +L+V ++H + RPTG+WL EFA YM +++ + VASP GG PVDP S Sbjct: 1 MMKTILMVTSSHDRFEGPDPRPTGVWLEEFAVPYMELLARKIGITVASPRGGAMPVDPRS 60 Query: 59 VDDHTAQEILDTQKYLEN---TIKLDEVSAENFDAIFLPGGHGTMYDLPDNQALQKLLRD 115 + T ++ Q +E T+ L +++ENFDAIFLPGGHG M+DLPDN L +LL + Sbjct: 61 --NPTPEQQQQWQAAIEASRATLPLAGMASENFDAIFLPGGHGPMFDLPDNPDLARLLTE 118 Query: 116 FYEADKIVAAVCHGPAGLVGATLSSGQPLVAGKRVNAFTDREEADTTLDKHLPFLLESKL 175 FY+A KI+AA+CHGPAGLVGA G PLVAG + ++T EE LDK +PF+LE +L Sbjct: 119 FYKAGKIIAAICHGPAGLVGARRPDGAPLVAGVTLTSYTASEEVAAELDKEVPFILEDRL 178 Query: 176 RDLGAIYVAAPNWTSHVEVDGNLITGQNPQSTVAVTEAVIAKL 218 R LGA ++A N H+E DG ITGQNP S+ ++ A++A L Sbjct: 179 RALGAHFIARENKADHIERDGQFITGQNPNSSTSIARAIVAAL 221 >ref|NP_436745.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021] pir||E95867 conserved hypothetical protein [imported] - Sinorhizobium meliloti (strain 1021) magaplasmid pSymB emb|CAC48605.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 226 Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 135/226 (59%), Gaps = 9/226 (3%) Query: 1 MAKKVLIVVTNHTEI-HEGRPTGIWLSEFAEAYMGFISQGYEVLVASPLGGQAPVDPGSV 59 M K+L+V+T+H + + G+PTG WL EFA Y F G EV +ASP GGQ P+DP S Sbjct: 1 MTMKILMVLTSHDRLGNTGKPTGFWLEEFAAPYYVFKDAGAEVTLASPKGGQPPIDPKSD 60 Query: 60 DDHTAQEILD-------TQKYLENTIKLDEVSAENFDAIFLPGGHGTMYDLPDNQALQKL 112 + + + +K L NT+KL EV E++DA+F PGGHG M+DL +++ L Sbjct: 61 EPASQTAAMGRFKDDPAARKALANTLKLGEVKQEDYDAVFYPGGHGPMWDLVNDRNSIAL 120 Query: 113 LRDFYEADKIVAAVCHGPAGLVGATLSSGQPLVAGKRVNAFTDREEADTTLDKHLPFLLE 172 + FY+A K VAAVCHGPA L T G+P+V G+RV FT+ EE L +PFL+E Sbjct: 121 IEGFYDAGKPVAAVCHGPAVLTQVT-HLGEPIVKGRRVTGFTNSEEEAVQLTDVVPFLVE 179 Query: 173 SKLRDLGAIYVAAPNWTSHVEVDGNLITGQNPQSTVAVTEAVIAKL 218 +L+ LG Y A +W VDG L+TGQNP S+ + ++ L Sbjct: 180 DELKRLGGRYEKAADWADFTVVDGRLVTGQNPSSSTSAASELLKLL 225 >gb|EAK14882.1| unknown [environmental sequence] Length = 231 Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 93/222 (41%), Positives = 135/222 (60%), Gaps = 6/222 (2%) Query: 3 KKVLIVVTNHTEIHE-GRPTGIWLSEFAEAYMGFISQGYEVLVASPLGGQAPVDPGS--V 59 +VL VVTNH ++ + G+ TG +L E + YM GY V SP GG AP+DP S + Sbjct: 7 NRVLFVVTNHEDLGDTGKKTGYFLREVSYPYMAVTEAGYSVDFVSPNGGPAPMDPNSNDM 66 Query: 60 DDHTAQEILDTQKY---LENTIKLDEVSAENFDAIFLPGGHGTMYDLPDNQALQKLLRDF 116 DD + D L+NT+ D+++ +++D I GGHGT++D PD++ L + Sbjct: 67 DDEVNKAFTDDSSIMDQLQNTMSPDQINPDDYDGIMYAGGHGTVWDFPDSEGLANIAISI 126 Query: 117 YEADKIVAAVCHGPAGLVGATLSSGQPLVAGKRVNAFTDREEADTTLDKHLPFLLESKLR 176 YE ++ A+CHGPAGLV LS G L++GKR ++FTD EE L+ +PFLL SKL Sbjct: 127 YERGGVLGAICHGPAGLVNLKLSDGTHLISGKRFSSFTDEEERSIKLENVVPFLLASKLE 186 Query: 177 DLGAIYVAAPNWTSHVEVDGNLITGQNPQSTVAVTEAVIAKL 218 + G ++ A N+ SHVEVDG L+T QNP S ++ +A++ L Sbjct: 187 EHGGVHTKAENFKSHVEVDGRLVTAQNPPSAKSMGDAMVKAL 228 >gb|EAA56028.1| hypothetical protein MG01679.4 [Magnaporthe grisea 70-15] Length = 231 Score = 182 bits (461), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 106/231 (45%), Positives = 140/231 (60%), Gaps = 12/231 (5%) Query: 1 MAKKVLIVVTNHTEIHE----GRPTGIWLSEFAEAYMGFISQGYEVLVASPLGGQAPVDP 56 M KKVL+V+T+ +E+ +PTG +L EFA Y F GYE+ V SP GG++ +DP Sbjct: 1 MVKKVLVVLTSASEMKNKNGNAKPTGWFLPEFAHPYDEFAKAGYELTVVSPKGGESKLDP 60 Query: 57 GSVD----DHTAQEILDTQKYL-ENTIKLDEV--SAENFDAIFLPGGHGTMYDLPDNQAL 109 S++ D ++ L+ QK L E T KL + A FDA+F PGGHG M DL + Sbjct: 61 ASIEMFKSDPSSTSFLNNQKDLWEKTKKLSDYVDKASEFDAVFYPGGHGPMLDLAVDAES 120 Query: 110 QKLLRDFYEADKIVAAVCHGPAGLVGATLSSGQPLVAGKRVNAFTDREEADTTLDKHLPF 169 QKL+ +F+EA K VAAVCH P L LS+G+ LV GK V FT++EE L ++PF Sbjct: 121 QKLIANFFEAGKPVAAVCHAPIVLADVKLSTGEYLVKGKTVTGFTNKEEEIMQLVDYMPF 180 Query: 170 LLESKLRDLGAIYVAAPN-WTSHVEVDGNLITGQNPQSTVAVTEAVIAKLG 219 LLE K++ GA +V A W V VDG LITGQNP S A+ EA++ LG Sbjct: 181 LLEDKVKASGASFVKADEPWGEKVVVDGKLITGQNPASAKALGEALVKVLG 231 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.316 0.134 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 336,803,089 Number of extensions: 14202065 Number of successful extensions: 35616 Number of sequences better than 1.0e-05: 158 Number of HSP's gapped: 35546 Number of HSP's successfully gapped: 158 Length of query: 219 Length of database: 757,237,578 Length adjustment: 121 Effective length of query: 98 Effective length of database: 428,710,599 Effective search space: 42013638702 Effective search space used: 42013638702 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 123 (52.0 bits)