BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0271.0023.p (275 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_692107.1| oxidoreductase [Oceanobacillus iheyensis HTE831... 410 e-113 ref|NP_489222.1| oxidoreductase [Nostoc sp. PCC 7120] >gi|252834... 401 e-111 ref|ZP_00110036.1| COG1028: Dehydrogenases with different specif... 400 e-110 ref|ZP_00160345.1| hypothetical protein Avar294801 [Anabaena var... 395 e-109 ref|NP_285687.1| oxidoreductase, short-chain dehydrogenase/reduc... 394 e-108 >ref|NP_692107.1| oxidoreductase [Oceanobacillus iheyensis HTE831] dbj|BAC13142.1| oxidoreductase (short-chain dehydrogenase:reductase family) [Oceanobacillus iheyensis HTE831] Length = 290 Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust. Identities = 187/275 (68%), Positives = 229/275 (83%) Query: 1 VQDRQPGIESEMKPRPEFETSSYXXXXXXXXXXXXITGGDSGIGRAVAVHFAKEGADVVI 60 VQ +QPG+ES+M P P+F SY ITGGDSGIG++V+VH+AKEGAD+ I Sbjct: 16 VQSKQPGVESKMTPTPQFIHESYEGSNKLKGKVAVITGGDSGIGKSVSVHYAKEGADIAI 75 Query: 61 SYLNEHADAEETKRQVEQEGRKCILVAGDIGVEAFCQDLINKTVEGLGKLDILINNAAEQ 120 YL+EH DAEETKR VEQEGRKCIL+ GDIG ++FC+ + ++ GK+DIL+NNAAEQ Sbjct: 76 LYLDEHEDAEETKRLVEQEGRKCILINGDIGNQSFCEAAATEVLDNFGKVDILVNNAAEQ 135 Query: 121 HPQDKIEDITSEQLERTFRTNIFSMFYLTKAAMPHLKKGSTIINTTSITAYRGSPQLLDY 180 HPQ + DI+SEQLE+TF+TN+FSMFYLTKA +P+LKKGS IINTTS+TAY G+P L+DY Sbjct: 136 HPQQTLMDISSEQLEKTFQTNVFSMFYLTKAILPNLKKGSAIINTTSVTAYEGNPVLIDY 195 Query: 181 SSTKGAILSFTRSLSMNLAEKGIRVNAVAPGPIWTPLIPSTFDAKKVSEFGGTQPMKRPG 240 SSTKGAI+SFTR+LS +LAEKGIRVNAVAPGPIWTPLIP++F+ ++V EFGG PMKRPG Sbjct: 196 SSTKGAIVSFTRALSNDLAEKGIRVNAVAPGPIWTPLIPASFNKQQVDEFGGNTPMKRPG 255 Query: 241 QPEELAPAYVYLASEDSSYVSGQVMHVNGGEIVNG 275 QP EL PAYVYLASEDSSY+SGQ +H+NGG++VNG Sbjct: 256 QPSELGPAYVYLASEDSSYMSGQTLHINGGKVVNG 290 >ref|NP_489222.1| oxidoreductase [Nostoc sp. PCC 7120] pir||AF2453 oxidoreductase alr5182 [imported] - Nostoc sp. (strain PCC 7120) dbj|BAB76881.1| oxidoreductase [Nostoc sp. PCC 7120] Length = 285 Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust. Identities = 191/269 (71%), Positives = 222/269 (82%) Query: 7 GIESEMKPRPEFETSSYXXXXXXXXXXXXITGGDSGIGRAVAVHFAKEGADVVISYLNEH 66 G ES+M+P+P+ + + Y ITGGDSGIGRAVA+ +AKEGADV YL+EH Sbjct: 17 GTESKMQPKPQADDAQYRGSGKLKDKVALITGGDSGIGRAVAIAYAKEGADVAFVYLSEH 76 Query: 67 ADAEETKRQVEQEGRKCILVAGDIGVEAFCQDLINKTVEGLGKLDILINNAAEQHPQDKI 126 DAEETK VE++GR+ + +AGDI EAFCQ I +TV+ GKLDILINNAAEQHPQ+ I Sbjct: 77 DDAEETKNLVEEQGRRAVSIAGDITDEAFCQRAIQQTVDEFGKLDILINNAAEQHPQESI 136 Query: 127 EDITSEQLERTFRTNIFSMFYLTKAAMPHLKKGSTIINTTSITAYRGSPQLLDYSSTKGA 186 EDIT EQLERTFRTNIFSMFYLTKAA+ HLKKGS IINTTS+TAY+GSPQLLDYSSTKGA Sbjct: 137 EDITKEQLERTFRTNIFSMFYLTKAAIKHLKKGSAIINTTSVTAYKGSPQLLDYSSTKGA 196 Query: 187 ILSFTRSLSMNLAEKGIRVNAVAPGPIWTPLIPSTFDAKKVSEFGGTQPMKRPGQPEELA 246 I++FTRSLS NL KGIRVNAVAPGPIWTPLIPSTF A+KV FG PM+R GQPEE+A Sbjct: 197 IVAFTRSLSQNLISKGIRVNAVAPGPIWTPLIPSTFPAEKVETFGKQVPMQRAGQPEEVA 256 Query: 247 PAYVYLASEDSSYVSGQVMHVNGGEIVNG 275 P+YV+LAS+DSSY+SGQV+H NGGE+VNG Sbjct: 257 PSYVFLASDDSSYMSGQVLHPNGGEVVNG 285 >ref|ZP_00110036.1| COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Nostoc punctiforme] Length = 312 Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/274 (68%), Positives = 221/274 (80%) Query: 2 QDRQPGIESEMKPRPEFETSSYXXXXXXXXXXXXITGGDSGIGRAVAVHFAKEGADVVIS 61 Q PG+ESEM P+P+ + + Y ITG DSGIGRAVA+ FAKEGADV I Sbjct: 39 QQEVPGVESEMTPKPKADDAQYRGSGKLQDKVALITGADSGIGRAVAIAFAKEGADVAIL 98 Query: 62 YLNEHADAEETKRQVEQEGRKCILVAGDIGVEAFCQDLINKTVEGLGKLDILINNAAEQH 121 YLNEH DA+ETK VE++GR+ + +AGDIG E FCQ I +TV GKLDILINNAAEQH Sbjct: 99 YLNEHDDAKETKHLVEKQGRRAVTIAGDIGDETFCQQAIQQTVGEFGKLDILINNAAEQH 158 Query: 122 PQDKIEDITSEQLERTFRTNIFSMFYLTKAAMPHLKKGSTIINTTSITAYRGSPQLLDYS 181 P+ IE+IT EQLERTFRTNIFSMF++TKAA+ HL+ GS IINTTS+TAY+GSPQLLDYS Sbjct: 159 PKQSIEEITKEQLERTFRTNIFSMFFMTKAALKHLQTGSAIINTTSVTAYKGSPQLLDYS 218 Query: 182 STKGAILSFTRSLSMNLAEKGIRVNAVAPGPIWTPLIPSTFDAKKVSEFGGTQPMKRPGQ 241 STKGAI++FTRSLS NL KGIRVNAVAPGPIWTPLIPSTF +KV FG PM+R GQ Sbjct: 219 STKGAIVAFTRSLSQNLVSKGIRVNAVAPGPIWTPLIPSTFPEEKVESFGKQVPMQRAGQ 278 Query: 242 PEELAPAYVYLASEDSSYVSGQVMHVNGGEIVNG 275 PEE+AP+YV+LAS+D+SYVSGQV+HVNGGE+VNG Sbjct: 279 PEEVAPSYVFLASDDASYVSGQVLHVNGGEVVNG 312 >ref|ZP_00160345.1| hypothetical protein Avar294801 [Anabaena variabilis ATCC 29413] Length = 285 Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/274 (68%), Positives = 221/274 (80%) Query: 2 QDRQPGIESEMKPRPEFETSSYXXXXXXXXXXXXITGGDSGIGRAVAVHFAKEGADVVIS 61 Q + PG ES+M+P+P+ + + Y ITGGDSGIGRAVA+ +AKEGADV Sbjct: 12 QQKTPGTESKMQPKPQADDARYLGSGKLKDKVALITGGDSGIGRAVAIAYAKEGADVAFV 71 Query: 62 YLNEHADAEETKRQVEQEGRKCILVAGDIGVEAFCQDLINKTVEGLGKLDILINNAAEQH 121 YL+EH DAEETK VE++GR+ + +AGDI EAFCQ I +TV+ GKLDILINNAAEQH Sbjct: 72 YLSEHGDAEETKNLVEEQGRRAVSIAGDITDEAFCQRAIQQTVDEFGKLDILINNAAEQH 131 Query: 122 PQDKIEDITSEQLERTFRTNIFSMFYLTKAAMPHLKKGSTIINTTSITAYRGSPQLLDYS 181 PQ+ IEDIT EQLERTF TNIFSMFYLTKAA+ HLK+GS IINTTS+TAY+GS LLDYS Sbjct: 132 PQESIEDITKEQLERTFSTNIFSMFYLTKAALKHLKQGSAIINTTSVTAYKGSSHLLDYS 191 Query: 182 STKGAILSFTRSLSMNLAEKGIRVNAVAPGPIWTPLIPSTFDAKKVSEFGGTQPMKRPGQ 241 +TKGAI++FTRSLS NL KGIRVNAVAPGPIWTPLIPSTF +KV FG PM+R GQ Sbjct: 192 ATKGAIVAFTRSLSQNLISKGIRVNAVAPGPIWTPLIPSTFPTEKVETFGKQVPMQRAGQ 251 Query: 242 PEELAPAYVYLASEDSSYVSGQVMHVNGGEIVNG 275 PEE+AP+YV+LAS+DSSY+SGQV+H NGGE+VNG Sbjct: 252 PEEVAPSYVFLASDDSSYMSGQVLHPNGGEVVNG 285 >ref|NP_285687.1| oxidoreductase, short-chain dehydrogenase/reductase family [Deinococcus radiodurans] pir||G75591 oxidoreductase, short-chain dehydrogenase/reductase family - Deinococcus radiodurans (strain R1) gb|AAF12426.1| oxidoreductase, short-chain dehydrogenase/reductase family [Deinococcus radiodurans] Length = 390 Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust. Identities = 182/275 (66%), Positives = 224/275 (81%) Query: 1 VQDRQPGIESEMKPRPEFETSSYXXXXXXXXXXXXITGGDSGIGRAVAVHFAKEGADVVI 60 Q++QPG E+EM P Y I+GGDSGIGRAVAVHFA+EGADV I Sbjct: 116 TQEQQPGSEAEMSLAPVVIRDDYRGSDKLKGKVALISGGDSGIGRAVAVHFAREGADVAI 175 Query: 61 SYLNEHADAEETKRQVEQEGRKCILVAGDIGVEAFCQDLINKTVEGLGKLDILINNAAEQ 120 YL+EH DA +T + V+ EGR+ +++AGDIG FCQD + + ++ LGKLDIL+NNAAEQ Sbjct: 176 LYLDEHQDARDTLKMVQAEGRQGLIIAGDIGDPKFCQDAVAQVMKELGKLDILVNNAAEQ 235 Query: 121 HPQDKIEDITSEQLERTFRTNIFSMFYLTKAAMPHLKKGSTIINTTSITAYRGSPQLLDY 180 HPQ+ + DIT EQLERTFRTNIF MFYLT+AA+PHL+KG+ I+NTTS+TAY+GSP+LLDY Sbjct: 236 HPQENLTDITPEQLERTFRTNIFGMFYLTQAALPHLQKGAVIVNTTSVTAYKGSPELLDY 295 Query: 181 SSTKGAILSFTRSLSMNLAEKGIRVNAVAPGPIWTPLIPSTFDAKKVSEFGGTQPMKRPG 240 SSTKGAIL+FTRSLS NLA+KGIRVNAVAPGPIWTPLIPSTFD K+V+E G P++RPG Sbjct: 296 SSTKGAILAFTRSLSQNLADKGIRVNAVAPGPIWTPLIPSTFDQKRVAEHGKKTPLERPG 355 Query: 241 QPEELAPAYVYLASEDSSYVSGQVMHVNGGEIVNG 275 QP E+AP+YV+LASEDSSY++GQV+H NGG++VNG Sbjct: 356 QPAEVAPSYVFLASEDSSYITGQVLHPNGGDVVNG 390 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.314 0.132 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 381,687,850 Number of extensions: 15108555 Number of successful extensions: 60211 Number of sequences better than 1.0e-05: 8750 Number of HSP's gapped: 47759 Number of HSP's successfully gapped: 8772 Length of query: 275 Length of database: 757,237,578 Length adjustment: 124 Effective length of query: 151 Effective length of database: 420,565,302 Effective search space: 63505360602 Effective search space used: 63505360602 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 125 (52.8 bits)