BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0269.0009.p (507 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_695265.1| ATP binding protein of ABC transporter [Bifidob... 525 e-148 gb|EAJ13199.1| unknown [environmental sequence] 522 e-147 gb|AAP86679.1| ABC transport system component [Bifidobacterium l... 520 e-146 ref|NP_437568.1| putative sugar uptake ABC transporter ATP-bindi... 509 e-143 ref|NP_769841.1| sugar ABC transporter ATP-binding protein [Brad... 499 e-140 >ref|NP_695265.1| ATP binding protein of ABC transporter [Bifidobacterium longum NCC2705] gb|AAN23901.1| ATP binding protein of ABC transporter [Bifidobacterium longum NCC2705] Length = 513 Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust. Identities = 271/503 (53%), Positives = 349/503 (69%), Gaps = 2/503 (0%) Query: 5 LSTQQPILQMTRIHKRFPGVKALTDVSLRLFPGEVHALMGENGAGKSTLIKVLTGVYSID 64 ++ + PI+ M I FPGVKAL V L L+PGEVHALMGENGAGKST+IK LTGVY I+ Sbjct: 1 MTDKNPIVVMKGITIEFPGVKALDGVDLTLYPGEVHALMGENGAGKSTMIKALTGVYKIN 60 Query: 65 EGLVEMEGTAISMRSPQESQAAGISTVYQEVNLCPNLTVAENIFIGREPRRFGCIQWKQM 124 G + ++G ++Q AGI+TVYQEVNLC NL+V EN+ +G E R I WK+ Sbjct: 61 AGSIMVDGKPQQFNGTLDAQNAGIATVYQEVNLCTNLSVGENVMLGHEKRGPFGIDWKKT 120 Query: 125 NLRAAELLSERMNLHIDVTLPLQSYSVAVQQLVAIARALNISAKVLILDEPTSSLDQNEV 184 + A + L++ ID PL S S+A+QQLVAIARA+ I+AKVLILDEPTSSLD NEV Sbjct: 121 HEAAKKYLAQMGLESIDPHTPLSSISIAMQQLVAIARAMVINAKVLILDEPTSSLDANEV 180 Query: 185 DQLFRIMRKLQQEGLSILFVTHFLDQMYEISDRVTILRGGELVGEYMAKELSRLDLVLKM 244 LF IMRK++ G++ILFV+HFLDQ+YEI+DR+TILR G+ + E M K+ R +L+ M Sbjct: 181 RDLFAIMRKVRDSGVAILFVSHFLDQIYEITDRLTILRNGQFIKEVMTKDTPRDELIGMM 240 Query: 245 IGKELHLLDEL-PELAAQDKNSXXXXXXXXXXXXXXXXXXPFDLAIRKGEVVGLAGLLGS 303 IGK L ++ + A ++ P D+ I KGEVVG AGLLGS Sbjct: 241 IGKSAAELSQIGAKKARREITPGEKPIVDVKGLGKKGTINPVDVDIYKGEVVGFAGLLGS 300 Query: 304 GRTEAARLLFGADKPDFGQVTLPSSGGGVHSPREAIGRRIAFCSENRKTEGVIGDLTVRE 363 GRTE RLL+GADKPD G TL + P A+ +IA+ +ENR+ EG+IGDLTVR+ Sbjct: 301 GRTELGRLLYGADKPDSGTYTLNGKKVNISDPYTALKNKIAYSTENRRDEGIIGDLTVRQ 360 Query: 364 NIILALQAKDGMFRTIPRKRQEELAGEYIRMLNINPPSPDQLIKNLSGGNQQKVLLARWL 423 NI++ALQA GMF+ IP+K + + +Y++ LN+ P PD+ +KNLSGGNQQKVL+ RWL Sbjct: 361 NILIALQATRGMFKPIPKKEADAIVDKYMKELNVRPADPDRPVKNLSGGNQQKVLIGRWL 420 Query: 424 LTEPELFILDEPTRGIDIGAKAEIQKLVLTLSRQGMSFLFISSELEEVLRVSDRIAILRD 483 T PEL ILDEPTRGIDIGAKAEIQ++VL L+ QGM +FISSELEEV+R+SD I +L+D Sbjct: 421 ATHPELLILDEPTRGIDIGAKAEIQQVVLDLASQGMGVVFISSELEEVVRLSDDIEVLKD 480 Query: 484 RRKVKEISEKD-MSQQQIMQAIA 505 R K+ EI D +SQ I++ IA Sbjct: 481 RHKIAEIENDDTVSQATIVETIA 503 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 19/228 (8%) Query: 286 DLAIRKGEVVGLAGLLGSGRTEAARLLFGADKPDFGQVTL---PSSGGGVHSPREA---- 338 DL + GEV L G G+G++ + L G K + G + + P G + A Sbjct: 27 DLTLYPGEVHALMGENGAGKSTMIKALTGVYKINAGSIMVDGKPQQFNGTLDAQNAGIAT 86 Query: 339 IGRRIAFCSENRKTEGVIGDLTVRENIILALQAKDGMFRTIPRKRQEELAGEYIRMLNIN 398 + + + C+ +L+V EN++L K G F I K+ E A +Y+ + + Sbjct: 87 VYQEVNLCT----------NLSVGENVMLG-HEKRGPF-GIDWKKTHEAAKKYLAQMGLE 134 Query: 399 PPSPDQLIKNLSGGNQQKVLLARWLLTEPELFILDEPTRGIDIGAKAEIQKLVLTLSRQG 458 P + ++S QQ V +AR ++ ++ ILDEPT +D ++ ++ + G Sbjct: 135 SIDPHTPLSSISIAMQQLVAIARAMVINAKVLILDEPTSSLDANEVRDLFAIMRKVRDSG 194 Query: 459 MSFLFISSELEEVLRVSDRIAILRDRRKVKEISEKDMSQQQIMQAIAG 506 ++ LF+S L+++ ++DR+ ILR+ + +KE+ KD + +++ + G Sbjct: 195 VAILFVSHFLDQIYEITDRLTILRNGQFIKEVMTKDTPRDELIGMMIG 242 >gb|EAJ13199.1| unknown [environmental sequence] Length = 530 Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust. Identities = 267/502 (53%), Positives = 355/502 (70%), Gaps = 4/502 (0%) Query: 8 QQPILQMTRIHKRFPGVKALTDVSLRLFPGEVHALMGENGAGKSTLIKVLTGVYSIDEGL 67 + P+++M I K FPGV AL V+ RLFPGE+HALMG+NGAGKSTLI VLTGV++ D G Sbjct: 29 RSPVVEMIGIDKSFPGVNALQRVNFRLFPGEIHALMGQNGAGKSTLINVLTGVHAHDAGE 88 Query: 68 VEMEGTAISMRSPQESQAAGISTVYQEVNLCPNLTVAENIFIGREPRRFGCIQWKQMNLR 127 + + G ++ +P+E++AAGI T+YQEVNLC NL+VAENIF GR+P R G I W ++ R Sbjct: 89 IRVGGAPVNFAAPREAEAAGIQTLYQEVNLCANLSVAENIFAGRQPMRRGAIDWNTIHAR 148 Query: 128 AAELLSERMNLHIDVTLPLQSYSVAVQQLVAIARALNISAKVLILDEPTSSLDQNEVDQL 187 + L+E ++L +DVT L +Y +AVQQ+VAIARA+++ A+VLILDEPTSSLD EV +L Sbjct: 149 SRAALAE-LDLSLDVTRSLDAYPIAVQQMVAIARAVSVDARVLILDEPTSSLDDGEVARL 207 Query: 188 FRIMRKLQQEGLSILFVTHFLDQMYEISDRVTILRGGELVGEYMAKELSRLDLVLKMIGK 247 F ++R+L+ G++ILFVTHFL+Q Y +SDR+T++R GE GEY+A++L LV KM G+ Sbjct: 208 FDVLRRLKASGIAILFVTHFLEQTYAVSDRITVMRNGEREGEYLARDLPVDVLVAKMTGR 267 Query: 248 ELHLLDELPELAAQDKNSXXXXX--XXXXXXXXXXXXXPFDLAIRKGEVVGLAGLLGSGR 305 E + D L AA + + P DL +R GE+VGLAGLLGSGR Sbjct: 268 E-RMSDTLQAGAAAVERTAGEAEPFLSMQQVGRRGMMSPLDLDVRPGEIVGLAGLLGSGR 326 Query: 306 TEAARLLFGADKPDFGQVTLPSSGGGVHSPREAIGRRIAFCSENRKTEGVIGDLTVRENI 365 TE A+L F A++ D G + + + + SP +A+ IA+C E+RK EG++ L++RENI Sbjct: 327 TETAQLAFAAERADTGAIEIDGARTRLASPHDAVRNGIAYCPEDRKKEGIVAALSIRENI 386 Query: 366 ILALQAKDGMFRTIPRKRQEELAGEYIRMLNINPPSPDQLIKNLSGGNQQKVLLARWLLT 425 ILALQA+ G +R I R RQ ELA YI L I +Q I LSGGNQQKVLLARWL T Sbjct: 387 ILALQARRGWWRLIGRARQRELADTYIARLGIKARDAEQPIGLLSGGNQQKVLLARWLAT 446 Query: 426 EPELFILDEPTRGIDIGAKAEIQKLVLTLSRQGMSFLFISSELEEVLRVSDRIAILRDRR 485 EP+L ILDEPTRGID+ AK +I + VL L QG++ LFISSE+ EV+RVS RIA+LRDRR Sbjct: 447 EPKLLILDEPTRGIDVAAKFDIMERVLALCAQGLAILFISSEISEVVRVSHRIAVLRDRR 506 Query: 486 KVKEISEKDMSQQQIMQAIAGG 507 KV E++ D S++Q+ + IAGG Sbjct: 507 KVAELTGADASEEQVYRLIAGG 528 >gb|AAP86679.1| ABC transport system component [Bifidobacterium longum bv. Infantis] Length = 504 Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust. Identities = 269/494 (54%), Positives = 343/494 (69%), Gaps = 2/494 (0%) Query: 14 MTRIHKRFPGVKALTDVSLRLFPGEVHALMGENGAGKSTLIKVLTGVYSIDEGLVEMEGT 73 M I FPGVKAL V L L+PGEVHALMGENGAGKST+IK LTGVY I+ G + ++G Sbjct: 1 MKGITIEFPGVKALDGVDLTLYPGEVHALMGENGAGKSTMIKALTGVYKINAGSIMVDGK 60 Query: 74 AISMRSPQESQAAGISTVYQEVNLCPNLTVAENIFIGREPRRFGCIQWKQMNLRAAELLS 133 ++Q AGI+TVYQEVNLC NL+V EN+ +G E R I WK+ + A + L+ Sbjct: 61 PQQFNGTLDAQNAGIATVYQEVNLCTNLSVGENVMLGHEKRGPFGIDWKKTHEAAKKYLA 120 Query: 134 ERMNLHIDVTLPLQSYSVAVQQLVAIARALNISAKVLILDEPTSSLDQNEVDQLFRIMRK 193 + ID PL S S+A+QQLVAIARA+ I+AKVLILDEPTSSLD NEV LF IMRK Sbjct: 121 QMGLESIDPHTPLSSISIAMQQLVAIARAMVINAKVLILDEPTSSLDANEVRDLFAIMRK 180 Query: 194 LQQEGLSILFVTHFLDQMYEISDRVTILRGGELVGEYMAKELSRLDLVLKMIGKELHLLD 253 ++ G++ILFV+HFLDQ+YEI+DR+TILR G+ + E M K+ R +L+ MIGK L Sbjct: 181 VRDSGVAILFVSHFLDQIYEITDRLTILRNGQFIKEVMTKDTPRDELIGMMIGKSAAELS 240 Query: 254 EL-PELAAQDKNSXXXXXXXXXXXXXXXXXXPFDLAIRKGEVVGLAGLLGSGRTEAARLL 312 ++ + A ++ P D+ I KGEVVG AGLLGSGRTE RLL Sbjct: 241 QIGAKKARREITPGEKPIVDVKGLGKKGTINPVDVDIYKGEVVGFAGLLGSGRTELGRLL 300 Query: 313 FGADKPDFGQVTLPSSGGGVHSPREAIGRRIAFCSENRKTEGVIGDLTVRENIILALQAK 372 +GADKPD G TL + P A+ +IA+ +ENR+ EG+IGDLTVR+NI++ALQA Sbjct: 301 YGADKPDSGTYTLNGKKVNISDPYTALKNKIAYSTENRRDEGIIGDLTVRQNILIALQAT 360 Query: 373 DGMFRTIPRKRQEELAGEYIRMLNINPPSPDQLIKNLSGGNQQKVLLARWLLTEPELFIL 432 GMF+ IP+K + + +Y++ LN+ P PD+ +KNLSGGNQQKVL+ RWL T PEL IL Sbjct: 361 RGMFKPIPKKEADAIVDKYMKELNVRPADPDRPVKNLSGGNQQKVLIGRWLATHPELLIL 420 Query: 433 DEPTRGIDIGAKAEIQKLVLTLSRQGMSFLFISSELEEVLRVSDRIAILRDRRKVKEISE 492 DEPTRGIDIGAKAEIQ++VL L+ QGM +FISSELEEV+R+SD I +L+DR K+ EI Sbjct: 421 DEPTRGIDIGAKAEIQQVVLDLASQGMGVVFISSELEEVVRLSDDIEVLKDRHKIAEIEN 480 Query: 493 KD-MSQQQIMQAIA 505 D +SQ I++ IA Sbjct: 481 DDTVSQATIVETIA 494 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 19/228 (8%) Query: 286 DLAIRKGEVVGLAGLLGSGRTEAARLLFGADKPDFGQVTL---PSSGGGVHSPREA---- 338 DL + GEV L G G+G++ + L G K + G + + P G + A Sbjct: 18 DLTLYPGEVHALMGENGAGKSTMIKALTGVYKINAGSIMVDGKPQQFNGTLDAQNAGIAT 77 Query: 339 IGRRIAFCSENRKTEGVIGDLTVRENIILALQAKDGMFRTIPRKRQEELAGEYIRMLNIN 398 + + + C+ +L+V EN++L K G F I K+ E A +Y+ + + Sbjct: 78 VYQEVNLCT----------NLSVGENVMLG-HEKRGPF-GIDWKKTHEAAKKYLAQMGLE 125 Query: 399 PPSPDQLIKNLSGGNQQKVLLARWLLTEPELFILDEPTRGIDIGAKAEIQKLVLTLSRQG 458 P + ++S QQ V +AR ++ ++ ILDEPT +D ++ ++ + G Sbjct: 126 SIDPHTPLSSISIAMQQLVAIARAMVINAKVLILDEPTSSLDANEVRDLFAIMRKVRDSG 185 Query: 459 MSFLFISSELEEVLRVSDRIAILRDRRKVKEISEKDMSQQQIMQAIAG 506 ++ LF+S L+++ ++DR+ ILR+ + +KE+ KD + +++ + G Sbjct: 186 VAILFVSHFLDQIYEITDRLTILRNGQFIKEVMTKDTPRDELIGMMIG 233 >ref|NP_437568.1| putative sugar uptake ABC transporter ATP-binding protein [Sinorhizobium meliloti 1021] pir||D95970 probable sugar uptake ABC transporter ATP-binding protein SMb21588 [imported] - Sinorhizobium meliloti (strain 1021) magaplasmid pSymB emb|CAC49428.1| putative sugar uptake ABC transporter ATP-binding protein [Sinorhizobium meliloti] Length = 505 Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust. Identities = 267/501 (53%), Positives = 343/501 (68%), Gaps = 7/501 (1%) Query: 6 STQQPILQMTRIHKRFPGVKALTDVSLRLFPGEVHALMGENGAGKSTLIKVLTGVYSIDE 65 ++ IL TRI K FPG KAL V L GEVHAL+GENGAGKSTLIK LTG Y D Sbjct: 3 TSSDNILSATRIEKGFPGTKALDRVDFHLRRGEVHALLGENGAGKSTLIKCLTGAYRRDG 62 Query: 66 GLVEMEGTAISMRSPQESQAAGISTVYQEVNLCPNLTVAENIFIGREPRRFGCIQWKQMN 125 G + ++G R ++Q GI TVYQEVNL PNLTVAEN+F+GR+PRRFG + + MN Sbjct: 63 GSMLLDGAEADPRDTFDAQRLGIGTVYQEVNLLPNLTVAENLFLGRQPRRFGMVDTRTMN 122 Query: 126 LRAAELLSERMNLHIDVTLPLQSYSVAVQQLVAIARALNISAKVLILDEPTSSLDQNEVD 185 +A ELL+E L IDVT L SYSVA+QQ+VAIARA+++S KVLILDEPT+SLD +EV+ Sbjct: 123 RKARELLAE-YELDIDVTRDLASYSVAIQQVVAIARAVDLSGKVLILDEPTASLDAHEVE 181 Query: 186 QLFRIMRKLQQEGLSILFVTHFLDQMYEISDRVTILRGGELVGEYMAKELSRLDLVLKMI 245 LFRI+R+L++ GL I+F+THFL+Q+Y ISDR+T+LR G+LVG A +L R +L+ MI Sbjct: 182 MLFRIVRRLKERGLGIIFITHFLEQVYAISDRITVLRNGQLVGTRNAADLDRRELIAMMI 241 Query: 246 GKELHLLDELPEL-AAQDKNSXXXXXXXXXXXXXXXXXXPFDLAIRKGEVVGLAGLLGSG 304 G+EL E+ +A PFDL +R GEVVG+AGLLGSG Sbjct: 242 GREL-----ATEIHSAHSDAVAGEPRYRFRNFGRRGKIDPFDLDVRAGEVVGMAGLLGSG 296 Query: 305 RTEAARLLFGADKPDFGQVTLPSSGGGVHSPREAIGRRIAFCSENRKTEGVIGDLTVREN 364 RTE A +LFGA + D G + + SPR AI ++ FC E+RKT G++GDL+VREN Sbjct: 297 RTETAEILFGAHRADSGTAEIDGRSVDLSSPRAAIRQKFGFCPEDRKTAGIVGDLSVREN 356 Query: 365 IILALQAKDGMFRTIPRKRQEELAGEYIRMLNINPPSPDQLIKNLSGGNQQKVLLARWLL 424 I+LALQA+ G R IPR Q LA YIR L+I ++ I+ LSGGNQQK +LARWL Sbjct: 357 IVLALQARRGWTRPIPRAEQNRLADHYIRALDIRTADREKPIRLLSGGNQQKAILARWLA 416 Query: 425 TEPELFILDEPTRGIDIGAKAEIQKLVLTLSRQGMSFLFISSELEEVLRVSDRIAILRDR 484 TEPEL ILDEPTRGID+GA AEI +L+ +L +GMS + ISSE+EE++ S R+ +LRD Sbjct: 417 TEPELLILDEPTRGIDVGAHAEIIRLIESLREKGMSLIVISSEIEELVAYSTRVVVLRDH 476 Query: 485 RKVKEISEKDMSQQQIMQAIA 505 V E+ ++ +I++AIA Sbjct: 477 AHVAELDGAQLTAHRIVEAIA 497 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 119/225 (52%), Gaps = 14/225 (6%) Query: 286 DLAIRKGEVVGLAGLLGSGRTEAARLLFGADKPDFGQVTLPSSGGGVHSPREAI-GRRIA 344 D +R+GEV L G G+G++ + L GA + D G + L G PR+ +R+ Sbjct: 28 DFHLRRGEVHALLGENGAGKSTLIKCLTGAYRRDGGSMLLD---GAEADPRDTFDAQRLG 84 Query: 345 FCSENRKTEGVIGDLTVRENIILALQAKD-GMF--RTIPRKRQEELAGEYIRMLNINPPS 401 + ++ ++ +LTV EN+ L Q + GM RT+ RK +E LA EY +++ Sbjct: 85 IGTVYQEVN-LLPNLTVAENLFLGRQPRRFGMVDTRTMNRKARELLA-EYELDIDVT--- 139 Query: 402 PDQLIKNLSGGNQQKVLLARWLLTEPELFILDEPTRGIDIGAKAEIQKLVLTLSRQGMSF 461 + + + S QQ V +AR + ++ ILDEPT +D + ++V L +G+ Sbjct: 140 --RDLASYSVAIQQVVAIARAVDLSGKVLILDEPTASLDAHEVEMLFRIVRRLKERGLGI 197 Query: 462 LFISSELEEVLRVSDRIAILRDRRKVKEISEKDMSQQQIMQAIAG 506 +FI+ LE+V +SDRI +LR+ + V + D+ +++++ + G Sbjct: 198 IFITHFLEQVYAISDRITVLRNGQLVGTRNAADLDRRELIAMMIG 242 >ref|NP_769841.1| sugar ABC transporter ATP-binding protein [Bradyrhizobium japonicum] dbj|BAC48466.1| sugar ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 528 Score = 499 bits (1286), Expect = e-140, Method: Compositional matrix adjust. Identities = 253/492 (51%), Positives = 348/492 (70%), Gaps = 3/492 (0%) Query: 10 PILQMTRIHKRFPGVKALTDVSLRLFPGEVHALMGENGAGKSTLIKVLTGVYSIDEGLVE 69 P+L++ I K F V+AL +V L GE+HAL+GENGAGKSTLIKV+TGV+ D G+V Sbjct: 24 PLLEVRGISKSFGAVRALQEVDFTLRAGEIHALLGENGAGKSTLIKVVTGVFPRDAGIVR 83 Query: 70 MEGTAISMRSPQESQAAGISTVYQEVNLCPNLTVAENIFIGREPRRFGCIQWKQMNLRAA 129 + G ++ RS + + AGI+TVYQEVNL PNL+VA+N+F+ R+P RFG ++ +M RA Sbjct: 84 LGGEEVAPRSAKAALQAGIATVYQEVNLLPNLSVAQNLFLDRQPMRFGIVRDGEMRRRAK 143 Query: 130 ELLSERMNLHIDVTLPLQSYSVAVQQLVAIARALNISAKVLILDEPTSSLDQNEVDQLFR 189 LL+E L IDV+ PL SYSVAVQ + AIARA+++SA+VLILDEPT+SLD++EV+ LF Sbjct: 144 ALLAE-FGLDIDVSAPLGSYSVAVQHVTAIARAVDLSARVLILDEPTASLDRHEVEILFG 202 Query: 190 IMRKLQQEGLSILFVTHFLDQMYEISDRVTILRGGELVGEYMAKELSRLDLVLKMIGKEL 249 IMR+L + G+ I+FV+HFLDQ+YEISDR+T+LR G LVGE L R++L+ M+G+EL Sbjct: 203 IMRQLAKRGIGIVFVSHFLDQVYEISDRITVLRNGRLVGERETASLPRIELIRMMLGREL 262 Query: 250 HLLDELPELAAQDKNSXXXXXXXXXXXXXXXXXXPFDLAIRKGEVVGLAGLLGSGRTEAA 309 + AA ++ PF+L +R GEVVGLAGLLGSGRTE A Sbjct: 263 --AETTGARAATREHQAREICASFENYGKSGYVAPFNLELRHGEVVGLAGLLGSGRTETA 320 Query: 310 RLLFGADKPDFGQVTLPSSGGGVHSPREAIGRRIAFCSENRKTEGVIGDLTVRENIILAL 369 RL+FGA++ D GQ + + +HSPR+ + +C E RKT+G++ +L+VRENI+LAL Sbjct: 321 RLVFGAERADRGQAKVEGAPVRLHSPRDGVRHGFGYCPEERKTDGIVAELSVRENIVLAL 380 Query: 370 QAKDGMFRTIPRKRQEELAGEYIRMLNINPPSPDQLIKNLSGGNQQKVLLARWLLTEPEL 429 QAK G+ R + R+ Q+E+A Y+RML+I P P++ + LSGGNQQKVLLARWL T P L Sbjct: 381 QAKRGLHRPLSRREQDEIARRYVRMLDIRPSDPERPVGLLSGGNQQKVLLARWLATSPRL 440 Query: 430 FILDEPTRGIDIGAKAEIQKLVLTLSRQGMSFLFISSELEEVLRVSDRIAILRDRRKVKE 489 +LDEPTRGID+GA AEI +L+ L G+S L ISSEL+E++ SDR+ +LRDR ++E Sbjct: 441 LVLDEPTRGIDVGAHAEIIRLIRDLCDDGLSLLVISSELDEIVTYSDRVVVLRDRAHIEE 500 Query: 490 ISEKDMSQQQIM 501 ++ + + I+ Sbjct: 501 LAGEAIDVGNIL 512 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 18/227 (7%) Query: 286 DLAIRKGEVVGLAGLLGSGRTEAARLLFGADKPDFGQVTLPSSGGGVHSPREAIGRRIAF 345 D +R GE+ L G G+G++ +++ G D G V L GG +PR A A Sbjct: 45 DFTLRAGEIHALLGENGAGKSTLIKVVTGVFPRDAGIVRL---GGEEVAPRSAKAALQAG 101 Query: 346 CSENRKTEGVIGDLTVRENIILALQ------AKDGMFRTIPRKRQEELAGEYIRMLNINP 399 + + ++ +L+V +N+ L Q +DG R +R + L E+ ++++ Sbjct: 102 IATVYQEVNLLPNLSVAQNLFLDRQPMRFGIVRDGEMR----RRAKALLAEFGLDIDVSA 157 Query: 400 PSPDQLIKNLSGGNQQKVLLARWLLTEPELFILDEPTRGIDIGAKAEIQKLVLTLSRQGM 459 P + + S Q +AR + + ILDEPT +D + ++ L+++G+ Sbjct: 158 P-----LGSYSVAVQHVTAIARAVDLSARVLILDEPTASLDRHEVEILFGIMRQLAKRGI 212 Query: 460 SFLFISSELEEVLRVSDRIAILRDRRKVKEISEKDMSQQQIMQAIAG 506 +F+S L++V +SDRI +LR+ R V E + + ++++ + G Sbjct: 213 GIVFVSHFLDQVYEISDRITVLRNGRLVGERETASLPRIELIRMMLG 259 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.137 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 653,449,572 Number of extensions: 25974935 Number of successful extensions: 195182 Number of sequences better than 1.0e-05: 18725 Number of HSP's gapped: 159497 Number of HSP's successfully gapped: 31532 Length of query: 507 Length of database: 757,237,578 Length adjustment: 130 Effective length of query: 377 Effective length of database: 404,274,708 Effective search space: 152411564916 Effective search space used: 152411564916 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 128 (53.9 bits)