BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0265.0014.p (749 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_242108.1| GTP pyrophosphokinase (stringent response) [Bac... 969 0.0 gb|AAG17607.1| ppGpp synthetase/hydrolase Rel [Geobacillus stear... 957 0.0 gb|AAC46041.1| (p)ppGpp synthetase [Bacillus subtilis] 955 0.0 ref|NP_390638.1| GTP pyrophosphokinase [Bacillus subtilis] >gi|6... 952 0.0 ref|NP_658435.1| TGS, TGS domain [Bacillus anthracis A2012] 937 0.0 >ref|NP_242108.1| GTP pyrophosphokinase (stringent response) [Bacillus halodurans] pir||B83805 GTP pyrophosphokinase (stringent response) relA [imported] - Bacillus halodurans (strain C-125) dbj|BAB04961.1| GTP pyrophosphokinase (stringent response) [Bacillus halodurans] Length = 728 Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust. Identities = 465/728 (63%), Positives = 591/728 (81%), Gaps = 8/728 (1%) Query: 24 MGIEQLTEKAGAYIKEKDLLRIREAYEFADQAHHGQVRKSGEPYILHPLAVADIVVNMQM 83 M I+Q+ EKA Y+ E + ++ AYEFA++AH GQ RKSGEPYILHP+ VA I+V++++ Sbjct: 5 MTIDQVLEKASRYLDEHHIEFLQRAYEFAEKAHAGQYRKSGEPYILHPVQVAGIIVDLEL 64 Query: 84 DVISIIAALLHDVVEDTTVSLEQIREKFGDTCAMLVDGLTKLERIRFRSKEEQQNENYRK 143 D ++ AA LHDVVEDT V++E + ++F + AMLVDG+TKL++I+++SKEEQQ EN+RK Sbjct: 65 DPNTVAAAFLHDVVEDTDVTVEALEKEFNEQVAMLVDGVTKLKKIKYKSKEEQQAENHRK 124 Query: 144 MFIAMAQDIRVIVIKLADRLHNMRTLKYQSEESQRRISYETLEIFCPIADRLGISAIKWE 203 M +AMA+DIRVI+IKLADRLHNMRTL+Y E QR S ETLEIF P+A RLGIS IKWE Sbjct: 125 MLVAMAKDIRVILIKLADRLHNMRTLRYMPPEKQRITSNETLEIFAPLAHRLGISTIKWE 184 Query: 204 MEDIALRYLNPQQYYRIANLVHKKRAEREQFIDSVIGRIRAKLDEMGIEGDLSGRPKHIY 263 +EDIALRYL+PQQYYRI NL+ KKRAERE++I+ VI +IR +L ++ +E ++SGRPKHIY Sbjct: 185 LEDIALRYLDPQQYYRIVNLMKKKRAEREEYIEDVIDKIRKQLQDIKVEAEISGRPKHIY 244 Query: 264 SVYNKMNTKNKQFNEIYDLLAIRIIVDNIKDCYATLGIIHTLWKPMPGRFKDYIAMPKAN 323 S+Y KM +NKQFNEIYDLLA+RIIV NIKDCYA LG+IHT WKPMPGRFKDYIAMPKAN Sbjct: 245 SIYRKMVLQNKQFNEIYDLLAVRIIVKNIKDCYAGLGVIHTCWKPMPGRFKDYIAMPKAN 304 Query: 324 MYQSLHTTVVGPGGEPTEVQIRTWEMHRTAEFGIAAHWAYKEGSSNNVNPENRMPFFREI 383 MYQSLHTTVVGP G+P EVQIRT EMHR AE+G+AAHWAYKEG++ E+++ +FREI Sbjct: 305 MYQSLHTTVVGPNGDPLEVQIRTEEMHRVAEYGVAAHWAYKEGTTLANPMEDKLTWFREI 364 Query: 384 LELQHEAKDAEEFVESLKMDFFSDLVFVFTPKGEVVELPAGSVPLDFAFRIHTEVGNRTI 443 LE Q++ DA+EF+ESLKMD FSD+VFVFTPKG+V+ELP GSVPLDFA+RIHTE+GNR I Sbjct: 365 LEWQNDTNDAQEFMESLKMDLFSDMVFVFTPKGDVIELPRGSVPLDFAYRIHTEIGNRCI 424 Query: 444 GSKVNGRIVPLDHKLKTGDIVEILTSKNSYGPSRDWLKIAQSSHARSKIKQWFKKEKREE 503 G+KVNG++VPLDH+LKTGDIVE+LTSK+SYGPS+DWLKI QSSHA++KIKQWFKKE+REE Sbjct: 425 GAKVNGKMVPLDHQLKTGDIVEVLTSKHSYGPSQDWLKITQSSHAKNKIKQWFKKERREE 484 Query: 504 NVEKGREAIERELKRQNVEVSDWLTEDKLSDAAKKFAFNDVEDMLSAVGFGGITAAQIAS 563 N+ KGRE++E+E++ + + + LT++ + A KF+F EDM +A G+GGI+ QIA+ Sbjct: 485 NIAKGRESVEKEIRILDFDPKEVLTQENIQAVANKFSFAGEEDMFAAAGYGGISPKQIAN 544 Query: 564 KLTEKLRKEQEEAAGHLELTTQMKEIKSSGEKRNQPTNGVRVKGIDNLLVRFARCCNPVP 623 +LTEKLRK+Q++ L + E++S K+ + T GVRVKG+DNLL+R +RCCNPVP Sbjct: 545 RLTEKLRKQQDQEEEQ-SLAEALSEVQSVAPKK-KTTIGVRVKGVDNLLIRLSRCCNPVP 602 Query: 624 GDDIVGYVTRGRGVSVHREDCPNIPADGDGEESARVIEVEWEGSMEA--NYSVDIEITGH 681 GD+IVGY+T+GRGVS+HR+DCPNI + E R++ VEWEG E+ NY+VDIEITG Sbjct: 603 GDEIVGYITKGRGVSIHRQDCPNINTE---EAKTRLLPVEWEGDKESNKNYNVDIEITGF 659 Query: 682 DRNGLLNEVLQAVSESKTNISAVTGRSD-KNKMAMIHMTILIRNTDHLQSXXXXXXXXXX 740 DRNGLLNEVLQAV+ESKT I+AV+GRSD +N++A IHMTI I N DHL Sbjct: 660 DRNGLLNEVLQAVTESKTLINAVSGRSDHRNRVATIHMTISIHNIDHLHKVVEKIKQLKD 719 Query: 741 XYTVNRIM 748 Y+V R+M Sbjct: 720 IYSVRRVM 727 >gb|AAG17607.1| ppGpp synthetase/hydrolase Rel [Geobacillus stearothermophilus] Length = 732 Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust. Identities = 456/727 (62%), Positives = 585/727 (80%), Gaps = 11/727 (1%) Query: 27 EQLTEKAGAYIKEKDLLRIREAYEFADQAHHGQVRKSGEPYILHPLAVADIVVNMQMDVI 86 EQ+ E+A Y+ E+D+ +++AYEFA AH Q RKSGEPYI+HP+ VA I+V+++MD Sbjct: 10 EQVFERASCYLSEQDVAFLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILVDLKMDAT 69 Query: 87 SIIAALLHDVVEDTTVSLEQIREKFGDTCAMLVDGLTKLERIRFRSKEEQQNENYRKMFI 146 +I A LHDV+EDT + E + +FG AMLVDG+TKL +I+++S+EEQQ EN+RKMF+ Sbjct: 70 TIAAGFLHDVIEDTEATKEDLEREFGAEVAMLVDGVTKLGKIKYKSQEEQQAENHRKMFL 129 Query: 147 AMAQDIRVIVIKLADRLHNMRTLKYQSEESQRRISYETLEIFCPIADRLGISAIKWEMED 206 AMAQDIRVI+IKLADRLHNMRTLK+ E QRRI+ ETLEIF P+A RLGIS IKWE+ED Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELED 189 Query: 207 IALRYLNPQQYYRIANLVHKKRAEREQFIDSVIGRIRAKLDEMGIEGDLSGRPKHIYSVY 266 ALRYLNPQQYYRI NL+ KKRAEREQ+++ VI +R +L+E+ I ++SGRPKHIYS+Y Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAEREQYLEEVIQEVRERLNEVHIPCEISGRPKHIYSIY 249 Query: 267 NKMNTKNKQFNEIYDLLAIRIIVDNIKDCYATLGIIHTLWKPMPGRFKDYIAMPKANMYQ 326 KM +NKQFNEIYDLLA+RIIV++IKDCYA LGIIHT WKPMPGRFKDYIAMPK NMYQ Sbjct: 250 RKMVMQNKQFNEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQ 309 Query: 327 SLHTTVVGPGGEPTEVQIRTWEMHRTAEFGIAAHWAYKEGSSNNVNP-ENRMPFFREILE 385 SLHTTV+GP GEP EVQIRT+EMH+ AEFGIAAHWAYKEG + N E ++ +FREILE Sbjct: 310 SLHTTVIGPKGEPLEVQIRTFEMHQIAEFGIAAHWAYKEGKTIKPNSFEEKLSWFREILE 369 Query: 386 LQHEAKDAEEFVESLKMDFFSDLVFVFTPKGEVVELPAGSVPLDFAFRIHTEVGNRTIGS 445 Q++A +AEEF+ESLKMD FSD+VFVFTPKGEV+ELPAGSVP+DFA+RIH+E+GN+TIG+ Sbjct: 370 WQNDASNAEEFMESLKMDLFSDMVFVFTPKGEVIELPAGSVPIDFAYRIHSEIGNKTIGA 429 Query: 446 KVNGRIVPLDHKLKTGDIVEILTSKNSYGPSRDWLKIAQSSHARSKIKQWFKKEKREENV 505 KVNG+IVPLD+KL+TGDIVEILTSK+SYGPS+DWLK+A++S AR+KI+Q+FKK++REEN+ Sbjct: 430 KVNGKIVPLDYKLQTGDIVEILTSKHSYGPSQDWLKLAKTSQARNKIRQFFKKQRREENI 489 Query: 506 EKGREAIERELKRQNVEVSDWLTEDKLSDAAKKFAFNDVEDMLSAVGFGGITAAQIASKL 565 EKG+E +E+E++ E + +T D + A+KF F++ +DM +AVG+ GITAAQIA +L Sbjct: 490 EKGKEMVEKEVRSLGFEPKEVMTADNVKRVAEKFNFSNEDDMYAAVGYHGITAAQIAHRL 549 Query: 566 TEKLRKEQEEAAGHLELTTQMKEIK-SSGEKRNQPTNGVRVKGIDNLLVRFARCCNPVPG 624 TEK RK+++ +L + E K +G+KR+ G+RV+G+DNLL+R +RCCNPVPG Sbjct: 550 TEKWRKQRDLEEQQRKLAEAVFEAKLPAGKKRD---CGIRVQGMDNLLIRLSRCCNPVPG 606 Query: 625 DDIVGYVTRGRGVSVHREDCPNIPADGDGEESARVIEVEWEGSM--EANYSVDIEITGHD 682 D+I+G++TRGRG+SVHR DCPN+ + E + R+I VEWE + Y+VDIEITG D Sbjct: 607 DEIIGFITRGRGISVHRADCPNVKTE---EAADRLIAVEWESGANGKCEYNVDIEITGFD 663 Query: 683 RNGLLNEVLQAVSESKTNISAVTGRSD-KNKMAMIHMTILIRNTDHLQSXXXXXXXXXXX 741 R GLLNEVLQAV+E++T+ISAV+GRSD ++K+A IHMTI I N HLQ Sbjct: 664 RRGLLNEVLQAVNETRTDISAVSGRSDYRHKIATIHMTIAIHNLSHLQKVVDRIKQIPDI 723 Query: 742 YTVNRIM 748 Y+V R+M Sbjct: 724 YSVQRLM 730 >gb|AAC46041.1| (p)ppGpp synthetase [Bacillus subtilis] Length = 734 Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/730 (61%), Positives = 581/730 (79%), Gaps = 14/730 (1%) Query: 27 EQLTEKAGAYIKEKDLLRIREAYEFADQAHHGQVRKSGEPYILHPLAVADIVVNMQMDVI 86 EQ+ +KA +Y+ ++ + + +AY +A+ AH Q RKSGEPYI+HP+ VA I+V+++MD Sbjct: 10 EQVIDKARSYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPS 69 Query: 87 SIIAALLHDVVEDTTVSLEQIREKFGDTCAMLVDGLTKLERIRFRSKEEQQNENYRKMFI 146 +I LHDVVEDT V+L+ ++E F + AMLVDG+TKL +I+++S+EEQQ EN+RKMF+ Sbjct: 70 TIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQQAENHRKMFV 129 Query: 147 AMAQDIRVIVIKLADRLHNMRTLKYQSEESQRRISYETLEIFCPIADRLGISAIKWEMED 206 AMAQDIRVI+IKLADRLHNMRTLK+ +E QRRIS ETLEIF P+A RLGIS IKWE+ED Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189 Query: 207 IALRYLNPQQYYRIANLVHKKRAEREQFIDSVIGRIRAKLDEMGIEGDLSGRPKHIYSVY 266 ALRYLNPQQYYRI NL+ KKRAERE ++D V+ ++ +++E+ I+ D SGRPKHIYS+Y Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIKADFSGRPKHIYSIY 249 Query: 267 NKMNTKNKQFNEIYDLLAIRIIVDNIKDCYATLGIIHTLWKPMPGRFKDYIAMPKANMYQ 326 KM +NKQFNEIYDLLA+RI+V++IKDCYA LGIIHT WKPMPGRFKDYIAMPK NMYQ Sbjct: 250 RKMVLQNKQFNEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQ 309 Query: 327 SLHTTVVGPGGEPTEVQIRTWEMHRTAEFGIAAHWAYKEGSSNN--VNPENRMPFFREIL 384 SLHTTV+GP G+P EVQIRT+EMH AE+G+AAHWAYKEG + N E ++ +FREIL Sbjct: 310 SLHTTVIGPKGDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAANEGATFEKKLSWFREIL 369 Query: 385 ELQHEAKDAEEFVESLKMDFFSDLVFVFTPKGEVVELPAGSVPLDFAFRIHTEVGNRTIG 444 E Q+E+ DAEEF+ESLK+D FSD+V+VFTPKG+V+ELP+GSVP+DF++RIH+E+GN+TIG Sbjct: 370 EFQNESTDAEEFMESLKIDLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIG 429 Query: 445 SKVNGRIVPLDHKLKTGDIVEILTSKNSYGPSRDWLKIAQSSHARSKIKQWFKKEKREEN 504 +KVNG++V LDHKL+TGDIVEILTSK+SYGPS+DW+K+AQ+S A+ KI+Q+FKK++REEN Sbjct: 430 AKVNGKMVTLDHKLRTGDIVEILTSKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQRREEN 489 Query: 505 VEKGREAIERELKRQNVEVSDWLTEDKLSDAAKKFAFNDVEDMLSAVGFGGITAAQIASK 564 VEKGRE +E+E+K + E+ D LT + + A KF F++ EDM +AVG+ GITA Q+A++ Sbjct: 490 VEKGRELVEKEIKNLDFELKDVLTPENIQKVADKFNFSNEEDMYAAVGYNGITALQVANR 549 Query: 565 LTEKLRKE--QEEAAGHLELTTQMKEIKSSGEKRNQPTNGVRVKGIDNLLVRFARCCNPV 622 LTEK RK+ QEE ++ T + G KR GVRVKGIDNLLVR ++CCNPV Sbjct: 550 LTEKERKQRDQEEQEKIVQEVTGEPKPYPQGRKREA---GVRVKGIDNLLVRLSKCCNPV 606 Query: 623 PGDDIVGYVTRGRGVSVHREDCPNIPADGDGEESARVIEVEWEGSMEAN----YSVDIEI 678 PGDDIVG++T+GRGVSVHREDCPN+ + E R+I VEWE + Y+V+IEI Sbjct: 607 PGDDIVGFITKGRGVSVHREDCPNVKTN---EAQERLIPVEWEHESQVQKRKEYNVEIEI 663 Query: 679 TGHDRNGLLNEVLQAVSESKTNISAVTGRSDKNKMAMIHMTILIRNTDHLQSXXXXXXXX 738 G+DR GLLNEVLQAV+E+KTNIS+V+G+SD+NK+A IHM I I+N +HL Sbjct: 664 LGYDRRGLLNEVLQAVNETKTNISSVSGKSDRNKVATIHMAIFIQNINHLHKVVERIKQI 723 Query: 739 XXXYTVNRIM 748 Y+V R+M Sbjct: 724 RDIYSVRRVM 733 >ref|NP_390638.1| GTP pyrophosphokinase [Bacillus subtilis] sp|O54408|RELA_BACSU GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) pir||C69691 GTP pyrophosphokinase (stringent response) relA - Bacillus subtilis emb|CAB14719.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. 168] Length = 734 Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/730 (61%), Positives = 580/730 (79%), Gaps = 14/730 (1%) Query: 27 EQLTEKAGAYIKEKDLLRIREAYEFADQAHHGQVRKSGEPYILHPLAVADIVVNMQMDVI 86 EQ+ +KA +Y+ ++ + + +AY +A+ AH Q RKSGEPYI+HP+ VA I+V+++MD Sbjct: 10 EQVIDKARSYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPS 69 Query: 87 SIIAALLHDVVEDTTVSLEQIREKFGDTCAMLVDGLTKLERIRFRSKEEQQNENYRKMFI 146 +I LHDVVEDT V+L+ ++E F + AMLVDG+TKL +I+++S+EEQQ EN+RKMF+ Sbjct: 70 TIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQQAENHRKMFV 129 Query: 147 AMAQDIRVIVIKLADRLHNMRTLKYQSEESQRRISYETLEIFCPIADRLGISAIKWEMED 206 AMAQDIRVI+IKLADRLHNMRTLK+ +E QRRIS ETLEIF P+A RLGIS IKWE+ED Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189 Query: 207 IALRYLNPQQYYRIANLVHKKRAEREQFIDSVIGRIRAKLDEMGIEGDLSGRPKHIYSVY 266 ALRYLNPQQYYRI NL+ KKRAERE ++D V+ ++ +++E+ I+ D SGRPKHIYS+Y Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIKADFSGRPKHIYSIY 249 Query: 267 NKMNTKNKQFNEIYDLLAIRIIVDNIKDCYATLGIIHTLWKPMPGRFKDYIAMPKANMYQ 326 KM +NKQFNEIYDLLA+RI+V++IKDCYA LGIIHT WKPMPGRFKDYIAMPK NMYQ Sbjct: 250 RKMVLQNKQFNEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQ 309 Query: 327 SLHTTVVGPGGEPTEVQIRTWEMHRTAEFGIAAHWAYKEGSSNN--VNPENRMPFFREIL 384 SLHTTV+GP +P EVQIRT+EMH AE+G+AAHWAYKEG + N E ++ +FREIL Sbjct: 310 SLHTTVIGPKADPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAANEGATFEKKLSWFREIL 369 Query: 385 ELQHEAKDAEEFVESLKMDFFSDLVFVFTPKGEVVELPAGSVPLDFAFRIHTEVGNRTIG 444 E Q+E+ DAEEF+ESLK+D FSD+V+VFTPKG+V+ELP+GSVP+DF++RIH+E+GN+TIG Sbjct: 370 EFQNESTDAEEFMESLKIDLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIG 429 Query: 445 SKVNGRIVPLDHKLKTGDIVEILTSKNSYGPSRDWLKIAQSSHARSKIKQWFKKEKREEN 504 +KVNG++V LDHKL+TGDIVEILTSK+SYGPS+DW+K+AQ+S A+ KI+Q+FKK++REEN Sbjct: 430 AKVNGKMVTLDHKLRTGDIVEILTSKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQRREEN 489 Query: 505 VEKGREAIERELKRQNVEVSDWLTEDKLSDAAKKFAFNDVEDMLSAVGFGGITAAQIASK 564 VEKGRE +E+E+K + E+ D LT + + A KF F++ EDM +AVG+ GITA Q+A++ Sbjct: 490 VEKGRELVEKEIKNLDFELKDVLTPENIQKVADKFNFSNEEDMYAAVGYNGITALQVANR 549 Query: 565 LTEKLRKE--QEEAAGHLELTTQMKEIKSSGEKRNQPTNGVRVKGIDNLLVRFARCCNPV 622 LTEK RK+ QEE ++ T + G KR GVRVKGIDNLLVR ++CCNPV Sbjct: 550 LTEKERKQRDQEEQEKIVQEVTGEPKPYPQGRKREA---GVRVKGIDNLLVRLSKCCNPV 606 Query: 623 PGDDIVGYVTRGRGVSVHREDCPNIPADGDGEESARVIEVEWEGSMEAN----YSVDIEI 678 PGDDIVG++T+GRGVSVHREDCPN+ + E R+I VEWE + Y+V+IEI Sbjct: 607 PGDDIVGFITKGRGVSVHREDCPNVKTN---EAQERLIPVEWEHESQVQKRKEYNVEIEI 663 Query: 679 TGHDRNGLLNEVLQAVSESKTNISAVTGRSDKNKMAMIHMTILIRNTDHLQSXXXXXXXX 738 G+DR GLLNEVLQAV+E+KTNIS+V+G+SD+NK+A IHM I I+N +HL Sbjct: 664 LGYDRRGLLNEVLQAVNETKTNISSVSGKSDRNKVATIHMAIFIQNINHLHKVVERIKQI 723 Query: 739 XXXYTVNRIM 748 Y+V R+M Sbjct: 724 RDIYSVRRVM 733 >ref|NP_658435.1| TGS, TGS domain [Bacillus anthracis A2012] Length = 727 Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/727 (61%), Positives = 573/727 (78%), Gaps = 13/727 (1%) Query: 27 EQLTEKAGAYIKEKDLLRIREAYEFADQAHHGQVRKSGEPYILHPLAVADIVVNMQMDVI 86 EQ+ EKA Y+ ++D+ + AYE+A AH Q RKSGEPYI+HP+ VA ++V++ MD Sbjct: 10 EQVLEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGVLVDLHMDPA 69 Query: 87 SIIAALLHDVVEDTTVSLEQIREKFGDTCAMLVDGLTKLERIRFRSKEEQQNENYRKMFI 146 ++ A LHDVVEDT ++LE I +F AMLVDG+TKL +I+++S E+QQ EN+RKMFI Sbjct: 70 TVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQQAENHRKMFI 129 Query: 147 AMAQDIRVIVIKLADRLHNMRTLKYQSEESQRRISYETLEIFCPIADRLGISAIKWEMED 206 AMAQDIRVI+IKLADRLHNMRTLK+ +E QRRI+ ETLEIF P+A RLGIS IKWE+ED Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189 Query: 207 IALRYLNPQQYYRIANLVHKKRAEREQFIDSVIGRIRAKLDEMGIEGDLSGRPKHIYSVY 266 +LRYLNPQQYYRI NL+ +KRAERE+++D V+ IR KLDE+ I+ ++SGRPKHIYS+Y Sbjct: 190 TSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLDEVAIQPEISGRPKHIYSIY 249 Query: 267 NKMNTKNKQFNEIYDLLAIRIIVDNIKDCYATLGIIHTLWKPMPGRFKDYIAMPKANMYQ 326 KM +NKQFNEIYDLLA+R++V++IKDCYA LGIIHT WKPMPGRFKDYIAMPKAN+YQ Sbjct: 250 RKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQ 309 Query: 327 SLHTTVVGPGGEPTEVQIRTWEMHRTAEFGIAAHWAYKEGSSNNVNP--ENRMPFFREIL 384 SLHTTV+GP G+P EVQIRT EMH AEFGIAAHWAYKEG + E ++ +FR+IL Sbjct: 310 SLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQIL 369 Query: 385 ELQHEAKDAEEFVESLKMDFFSDLVFVFTPKGEVVELPAGSVPLDFAFRIHTEVGNRTIG 444 E Q+EA +AEEF+ESLK+D FSD+VFVFTPKG+V+ELP GSVP+DFA+R+H+E+GN+TIG Sbjct: 370 EWQNEASNAEEFMESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVHSEIGNKTIG 429 Query: 445 SKVNGRIVPLDHKLKTGDIVEILTSKNSYGPSRDWLKIAQSSHARSKIKQWFKKEKREEN 504 +KVNG++V LD+KLKTGDI+EILTSK+SYGPS+DW+K+AQ+SHA++KI+Q+FKK++R+EN Sbjct: 430 AKVNGKMVTLDYKLKTGDIIEILTSKHSYGPSQDWVKLAQTSHAKNKIRQFFKKQRRDEN 489 Query: 505 VEKGREAIERELKRQNVEVSDWLTEDKLSDAAKKFAFNDVEDMLSAVGFGGITAAQIASK 564 +EKGRE +E+E++ E+ + L D L A+KF F + EDM +AVG+ GITA+QI ++ Sbjct: 490 IEKGRELVEKEVRSLEYEMKEVLAPDNLKRVAEKFNFANEEDMFAAVGYNGITASQIVTR 549 Query: 565 LTEKLRKEQEEAAGHLELTTQMKEIKSSGEKRNQPTNGVRVKGIDNLLVRFARCCNPVPG 624 LT+K RK++EE + K + +GV+V G DNLL+R ++CCNPVPG Sbjct: 550 LTDKFRKQREEEEIVEVKEVR------KPMKIRKWDSGVKVSGADNLLIRLSKCCNPVPG 603 Query: 625 DDIVGYVTRGRGVSVHREDCPNIPADGDGEESARVIEVEWEGS--MEANYSVDIEITGHD 682 DDIVGY+T+GRGVS+HR DC N+ + E R++EVEWEGS E Y+VDIEI+G+D Sbjct: 604 DDIVGYITKGRGVSIHRRDCVNVHTE---EAIERLLEVEWEGSPEKEIEYNVDIEISGYD 660 Query: 683 RNGLLNEVLQAVSESKTNISAVTGRSDKNKMAMIHMTILIRNTDHLQSXXXXXXXXXXXY 742 R GLLNEVLQAV+E+KT ISAV+GRSD+NKMA I+M+I IRN HL+ Y Sbjct: 661 RRGLLNEVLQAVTETKTYISAVSGRSDRNKMATINMSISIRNLQHLKKVVERIKRVPEIY 720 Query: 743 TVNRIMQ 749 V R+M Sbjct: 721 AVRRMMH 727 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.134 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,064,275,301 Number of extensions: 45678867 Number of successful extensions: 138416 Number of sequences better than 1.0e-05: 1175 Number of HSP's gapped: 136114 Number of HSP's successfully gapped: 1180 Length of query: 749 Length of database: 757,237,578 Length adjustment: 133 Effective length of query: 616 Effective length of database: 396,129,411 Effective search space: 244015717176 Effective search space used: 244015717176 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)