BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0264.0043.p (368 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_833631.1| Cell division protein ftsW [Bacillus cereus ATC... 291 2e-77 ref|NP_243432.1| stage V sporulation protein E (required for spo... 290 3e-77 ref|NP_657880.1| FTSW_RODA_SPOVE, Cell cycle protein [Bacillus a... 290 3e-77 ref|NP_389404.1| spoVE [Bacillus subtilis] >gi|134774|sp|P07373|... 270 6e-71 emb|CAA35784.1| unnamed protein product [Bacillus subtilis] 248 1e-64 >ref|NP_833631.1| Cell division protein ftsW [Bacillus cereus ATCC 14579] gb|AAP10832.1| Cell division protein ftsW [Bacillus cereus ATCC 14579] Length = 366 Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 154/361 (42%), Positives = 200/361 (55%) Query: 8 RHAPDIWILMVILSLLAIGMVMVYSAGSVLGFRNYGDSFYFVKRQXXXXXXXXXXMFVTA 67 + PD +++V LSLL IGM+MVYSA +V GDSF+F KRQ MF Sbjct: 5 KKTPDFILIIVTLSLLTIGMIMVYSASAVWASYKMGDSFFFAKRQLLFAGLGVVAMFFIM 64 Query: 68 NTDYLVLKKLARPAXXXXXXXXXXXXXXXXXXXXXXARSWLGISSFGIQPSEFMKMGMIL 127 DY V + ++ ARSW+GI +F IQPSEFMK MI+ Sbjct: 65 KIDYWVWRTYSKVILLVCFILLILVLIPGVGLVRGGARSWIGIGAFSIQPSEFMKFAMII 124 Query: 128 YLANWLGKEDYDISTFTRGLLPPLALIGSAFALIMMQPDLGTGTVMFGAALMMVFTAGAR 187 +LA +L + I++F RGLLP L + AF +IM+QPDLGTGTVM G ++M+F +GAR Sbjct: 125 FLAKFLAERQKLITSFKRGLLPALIFVFLAFGMIMLQPDLGTGTVMVGTCIIMIFISGAR 184 Query: 188 MKHXXXXXXXXXXXXXXXXXXXPYRLQRITAFLDPWSDPLGAGYQIIQSLYAIXXXXXXX 247 + H PYR++RIT++LDPWSDPLG+G+QIIQSL AI Sbjct: 185 VFHFAMFGLIGVAGFVGLIASAPYRMKRITSYLDPWSDPLGSGFQIIQSLLAIGPGGLFG 244 Query: 248 XXXXMSRQKYSYVPEPQTDFIFSILAEEXXXXXXXXXXXXXXXXXWRGMKVAMSLPDRFG 307 SRQK+ Y+PEPQTDFIF+IL+EE WRG+++A+ PD +G Sbjct: 245 LGLGQSRQKFLYLPEPQTDFIFAILSEELGFIGGSFVLLLFSLLLWRGIRIALGAPDLYG 304 Query: 308 SYLAVGIVCMXXXXXXXXXXXXXGLMPVTGITLPLISYGGSSXXXXXXXXXXXXXXSRYA 367 ++LAVGIV M GLMPVTGITLP +SYGGSS SR++ Sbjct: 305 TFLAVGIVAMIAIQVMINVGVVTGLMPVTGITLPFLSYGGSSLTLMLMAVGVLLNISRHS 364 Query: 368 R 368 R Sbjct: 365 R 365 >ref|NP_243432.1| stage V sporulation protein E (required for spore cortex synthesis) [Bacillus halodurans] pir||F83970 stage V sporulation protein E (required for spore cortex synthesis) spoVE [imported] - Bacillus halodurans (strain C-125) dbj|BAB06285.1| stage V sporulation protein E (required for spore cortex synthesis) [Bacillus halodurans] Length = 366 Score = 290 bits (743), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 154/365 (42%), Positives = 199/365 (54%) Query: 4 MNKSRHAPDIWILMVILSLLAIGMVMVYSAGSVLGFRNYGDSFYFVKRQXXXXXXXXXXM 63 M + + APD +++ ++LL IG++MVYSA + D F+F KRQ M Sbjct: 1 MPRQKAAPDYLLVVATVALLIIGLIMVYSASEAWATYRFDDGFFFAKRQLFFASVGFIAM 60 Query: 64 FVTANTDYLVLKKLARPAXXXXXXXXXXXXXXXXXXXXXXARSWLGISSFGIQPSEFMKM 123 +Y + A+ ARSWLG+ +F IQPSEFMKM Sbjct: 61 LFMMRVEYWTWRVWAKLMVIVCFVLLIIVLIPGVGLVRGGARSWLGVGAFSIQPSEFMKM 120 Query: 124 GMILYLANWLGKEDYDISTFTRGLLPPLALIGSAFALIMMQPDLGTGTVMFGAALMMVFT 183 MI++LA +L + I++F +GLLP L+L+ AF +IM+QPDLGTG VM G ++M+F Sbjct: 121 AMIVFLAKFLAENQKLITSFKKGLLPSLSLVMLAFGMIMLQPDLGTGAVMVGTCVVMIFV 180 Query: 184 AGARMKHXXXXXXXXXXXXXXXXXXXPYRLQRITAFLDPWSDPLGAGYQIIQSLYAIXXX 243 AGAR+ H PYR++RIT+FLDPWSDPLG+G+QIIQSLYAI Sbjct: 181 AGARILHFVMLGIVGMAGFAALIISAPYRIKRITSFLDPWSDPLGSGFQIIQSLYAIGPG 240 Query: 244 XXXXXXXXMSRQKYSYVPEPQTDFIFSILAEEXXXXXXXXXXXXXXXXXWRGMKVAMSLP 303 SRQKY Y+PEPQTDFIF+IL+EE WRG+++A+ P Sbjct: 241 GLLGLGLGESRQKYYYLPEPQTDFIFAILSEELGFLGGCFVIALFGIVLWRGIRIALGAP 300 Query: 304 DRFGSYLAVGIVCMXXXXXXXXXXXXXGLMPVTGITLPLISYGGSSXXXXXXXXXXXXXX 363 D FGS+LA GIV M GLMPVTGITLPL+SYGGSS Sbjct: 301 DLFGSFLATGIVAMVAIQVMINIGVVTGLMPVTGITLPLLSYGGSSLTLMLVSLGVLLNV 360 Query: 364 SRYAR 368 SRY R Sbjct: 361 SRYTR 365 >ref|NP_657880.1| FTSW_RODA_SPOVE, Cell cycle protein [Bacillus anthracis A2012] ref|NP_846290.1| stage V sporulation protein E [Bacillus anthracis str. Ames] ref|NP_980252.1| stage V sporulation protein E [Bacillus cereus ATCC 10987] gb|AAP27776.1| stage V sporulation protein E [Bacillus anthracis str. Ames] gb|AAS42860.1| stage V sporulation protein E [Bacillus cereus ATCC 10987] Length = 363 Score = 290 bits (742), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 153/361 (42%), Positives = 200/361 (55%) Query: 8 RHAPDIWILMVILSLLAIGMVMVYSAGSVLGFRNYGDSFYFVKRQXXXXXXXXXXMFVTA 67 + PD +++V L+LL IGM+MVYSA +V GDSF+F KRQ MF Sbjct: 2 KKTPDFILIIVTLALLTIGMIMVYSASAVWASYKMGDSFFFAKRQLLFAGLGVVAMFFIM 61 Query: 68 NTDYLVLKKLARPAXXXXXXXXXXXXXXXXXXXXXXARSWLGISSFGIQPSEFMKMGMIL 127 DY V + ++ ARSW+GI +F IQPSEFMK MI+ Sbjct: 62 KIDYWVWRTYSKVILLVCFILLILVLIPGVGLVRGGARSWIGIGAFSIQPSEFMKFAMII 121 Query: 128 YLANWLGKEDYDISTFTRGLLPPLALIGSAFALIMMQPDLGTGTVMFGAALMMVFTAGAR 187 +LA +L + I++F RGLLP L + AF +IM+QPDLGTGTVM G ++M+F +GAR Sbjct: 122 FLAKFLAERQKLITSFKRGLLPALGFVFLAFGMIMLQPDLGTGTVMVGTCIIMIFISGAR 181 Query: 188 MKHXXXXXXXXXXXXXXXXXXXPYRLQRITAFLDPWSDPLGAGYQIIQSLYAIXXXXXXX 247 + H PYR++RIT++LDPWSDPLG+G+QIIQSL AI Sbjct: 182 VFHFAMFGLLGVAGFVGLIASAPYRMKRITSYLDPWSDPLGSGFQIIQSLLAIGPGGLFG 241 Query: 248 XXXXMSRQKYSYVPEPQTDFIFSILAEEXXXXXXXXXXXXXXXXXWRGMKVAMSLPDRFG 307 SRQK+ Y+PEPQTDFIF+IL+EE WRG+++A+ PD +G Sbjct: 242 LGLGQSRQKFLYLPEPQTDFIFAILSEELGFIGGSFVLLLFSLLLWRGIRIALGAPDLYG 301 Query: 308 SYLAVGIVCMXXXXXXXXXXXXXGLMPVTGITLPLISYGGSSXXXXXXXXXXXXXXSRYA 367 ++LAVGIV M GLMPVTGITLP +SYGGSS SR++ Sbjct: 302 TFLAVGIVAMIAIQVMINVGVVTGLMPVTGITLPFLSYGGSSLTLMLMAVGVLLNISRHS 361 Query: 368 R 368 R Sbjct: 362 R 362 >ref|NP_389404.1| spoVE [Bacillus subtilis] sp|P07373|SP5E_BACSU Stage V sporulation protein E pir||SZBS5E stage V sporulation protein E - Bacillus subtilis emb|CAA35783.1| unnamed protein product [Bacillus subtilis] emb|CAB13394.1| spoVE [Bacillus subtilis subsp. subtilis str. 168] Length = 366 Score = 270 bits (689), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 146/365 (40%), Positives = 204/365 (55%) Query: 4 MNKSRHAPDIWILMVILSLLAIGMVMVYSAGSVLGFRNYGDSFYFVKRQXXXXXXXXXXM 63 M + +PD+ ++++ L LL IG++MVYSA +V + DSF+F KRQ M Sbjct: 1 MTTKKTSPDLLLVIITLLLLTIGLIMVYSASAVWADYKFDDSFFFAKRQLLFAGIGVIAM 60 Query: 64 FVTANTDYLVLKKLARPAXXXXXXXXXXXXXXXXXXXXXXARSWLGISSFGIQPSEFMKM 123 F N DY + ++ +RSW+G+ +F IQPSEFMK+ Sbjct: 61 FFIMNVDYWTWRTWSKLLMVICFFLLVLVLIPGVGMVRNGSRSWIGVGAFSIQPSEFMKL 120 Query: 124 GMILYLANWLGKEDYDISTFTRGLLPPLALIGSAFALIMMQPDLGTGTVMFGAALMMVFT 183 MI +LA +L ++ +I++F RG +P L ++ SAF +IM QPDLGTGTVM G ++M+F Sbjct: 121 AMIAFLAKFLSEKQKNITSFRRGFVPALGIVFSAFLIIMCQPDLGTGTVMVGTCIVMIFV 180 Query: 184 AGARMKHXXXXXXXXXXXXXXXXXXXPYRLQRITAFLDPWSDPLGAGYQIIQSLYAIXXX 243 AGAR+ H PYR++RIT++L+PW DPLG+G+QIIQSLYA+ Sbjct: 181 AGARIAHFVFLGLIGLSGFVGLVLSAPYRIKRITSYLNPWEDPLGSGFQIIQSLYAVGPG 240 Query: 244 XXXXXXXXMSRQKYSYVPEPQTDFIFSILAEEXXXXXXXXXXXXXXXXXWRGMKVAMSLP 303 SRQK+ Y+PEPQTDFIF+IL+EE WRG+++A+ P Sbjct: 241 GLFGMGLGQSRQKFFYLPEPQTDFIFAILSEELGFIGGTLILLLFSVLLWRGIRIALGAP 300 Query: 304 DRFGSYLAVGIVCMXXXXXXXXXXXXXGLMPVTGITLPLISYGGSSXXXXXXXXXXXXXX 363 D +GS++AVGI+ M GL+PVTGITLP +SYGGSS Sbjct: 301 DLYGSFVAVGIISMIAIQVMINIGVVTGLIPVTGITLPFLSYGGSSLTLMLMAVGVLLNV 360 Query: 364 SRYAR 368 SRY+R Sbjct: 361 SRYSR 365 >emb|CAA35784.1| unnamed protein product [Bacillus subtilis] Length = 290 Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 120/265 (45%), Positives = 163/265 (61%) Query: 104 ARSWLGISSFGIQPSEFMKMGMILYLANWLGKEDYDISTFTRGLLPPLALIGSAFALIMM 163 +RSW+G+ +F IQPSEFMK+ MI +LA +L ++ +I++F RG +P L ++ SAF +IM Sbjct: 25 SRSWIGVGAFSIQPSEFMKLAMIAFLAKFLSEKQKNITSFRRGFVPALGIVFSAFLIIMC 84 Query: 164 QPDLGTGTVMFGAALMMVFTAGARMKHXXXXXXXXXXXXXXXXXXXPYRLQRITAFLDPW 223 QPDLGTGTVM G ++M+F AGAR+ H PYR++RIT++L+PW Sbjct: 85 QPDLGTGTVMVGTCIVMIFVAGARIAHFVFLGLIGLSGFVGLVLSAPYRIKRITSYLNPW 144 Query: 224 SDPLGAGYQIIQSLYAIXXXXXXXXXXXMSRQKYSYVPEPQTDFIFSILAEEXXXXXXXX 283 DPLG+G+QIIQSLYA+ SRQK+ Y+PEPQTDFIF+IL+EE Sbjct: 145 EDPLGSGFQIIQSLYAVGPGGLFGMGLGQSRQKFFYLPEPQTDFIFAILSEELGFIGGTL 204 Query: 284 XXXXXXXXXWRGMKVAMSLPDRFGSYLAVGIVCMXXXXXXXXXXXXXGLMPVTGITLPLI 343 WRG+++A+ PD +GS++AVGI+ M GL+PVTGITLP + Sbjct: 205 ILLLFSVLLWRGIRIALGAPDLYGSFVAVGIISMIAIQVMINIGVVTGLIPVTGITLPFL 264 Query: 344 SYGGSSXXXXXXXXXXXXXXSRYAR 368 SYGGSS SRY+R Sbjct: 265 SYGGSSLTLMLMAVGVLLNVSRYSR 289 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.327 0.140 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 359,357,092 Number of extensions: 10222908 Number of successful extensions: 26427 Number of sequences better than 1.0e-05: 899 Number of HSP's gapped: 24591 Number of HSP's successfully gapped: 907 Length of query: 368 Length of database: 757,237,578 Length adjustment: 127 Effective length of query: 241 Effective length of database: 412,420,005 Effective search space: 99393221205 Effective search space used: 99393221205 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 126 (53.1 bits)