BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0264.0042.p (374 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAA01454.1| peptidoglycan synthesis enzyme [Bacillus subtilis] 392 e-108 ref|NP_389405.1| UDP-N-acetylglucosamine-N-acetylmuramyl- (penta... 389 e-107 ref|NP_833630.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(Penta... 384 e-105 ref|NP_657879.1| Glyco_transf_28, Glycosyltransferase family 28 ... 381 e-104 ref|NP_980251.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(penta... 380 e-104 >dbj|BAA01454.1| peptidoglycan synthesis enzyme [Bacillus subtilis] Length = 363 Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust. Identities = 197/365 (53%), Positives = 259/365 (70%), Gaps = 4/365 (1%) Query: 4 MRIVLSGGGTGGHIYPAVAVARQLQAEDKDPAFLYIGGKRGLESKLVPNENLPFQSIDIT 63 MRI +SGGGTGGHIYPA+A +++Q + FLYIG + GLE K+V EN+PF+SI+IT Sbjct: 1 MRIAISGGGTGGHIYPALAFIKEVQRRHPNVEFLYIGTENGLEKKIVERENIPFRSIEIT 60 Query: 64 GFRRKLSMDNVKTVMRFLKGVKASKEMLREFKPDVVIGTGGYVCGPVVYAASKLGIPTLI 123 GF+RKLS +NVKTVMRFLKGVK SK L EFKPD VIGTGGYVCGPVVYAA+K+GIPT++ Sbjct: 61 GFKRKLSFENVKTVMRFLKGVKKSKSYLAEFKPDAVIGTGGYVCGPVVYAAAKMGIPTIV 120 Query: 124 HEQNAIPGLTNRFLSRYADTVAVSFEGTESAFPGSKHVIYTGNPRATTVTAASPQRGFAS 183 HEQN++PG+TN+FLS+Y + VA+ FE +S FP K V++TGNPRA+ V + R A Sbjct: 121 HEQNSLPGITNKFLSKYVNKVAICFEEAKSHFPSEK-VVFTGNPRASEVVSIKTGRSLAE 179 Query: 184 LGIPEGSTVVLMVGGSGGARAINQAMIEMAPFVGKGNGVHYVYVTGEAYFEETRKALREK 243 G+ E VL+ GGS GA IN+A+I+M V K +Y+TGE ++E+ L+ K Sbjct: 180 FGLSEDKKTVLIFGGSRGAAPINRAVIDMQD-VLKTRDYQVLYITGEVHYEKVMNELKSK 238 Query: 244 LGSEPSWLHLLPYVHNMPEVLACTSLIVNRAGASFLAEITALGIPSVLIPSPNVTNNHQE 303 ++ P++H MPE L +IV RAGA+ +AEITALGIPSVLIPSP VT NHQE Sbjct: 239 GAADNMVTK--PFLHQMPEYLKAIDVIVARAGATTIAEITALGIPSVLIPSPYVTANHQE 296 Query: 304 ANARQLEREGAAVVLLEKDLNGQSLMEAVQKIIGAEPVRRQMSEASRRLGKRDSAALVVS 363 NAR L + AA+VL E +L+G+ L+EA+ +I+ E ++MSE ++ LG D+AA + S Sbjct: 297 VNARSLGQHDAAIVLKETELSGEKLIEALDRIVLNEQTLKEMSERTKSLGVPDAAARLYS 356 Query: 364 ELRRL 368 L L Sbjct: 357 VLEEL 361 >ref|NP_389405.1| UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Bacillus subtilis] sp|P37585|MURG_BACSU UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) pir||JC1275 phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) - Bacillus subtilis emb|CAA45558.1| N-acetylglucosaminyl transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase [Bacillus subtilis] emb|CAB13395.1| UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Bacillus subtilis subsp. subtilis str. 168] prf||1904153C murG gene Length = 363 Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust. Identities = 196/365 (53%), Positives = 258/365 (70%), Gaps = 4/365 (1%) Query: 4 MRIVLSGGGTGGHIYPAVAVARQLQAEDKDPAFLYIGGKRGLESKLVPNENLPFQSIDIT 63 MRI +SGGGTGGHIYPA+A +++Q + FLYIG + GLE K+V EN+PF+SI+IT Sbjct: 1 MRIAISGGGTGGHIYPALAFIKEVQRRHPNVEFLYIGTENGLEKKIVERENIPFRSIEIT 60 Query: 64 GFRRKLSMDNVKTVMRFLKGVKASKEMLREFKPDVVIGTGGYVCGPVVYAASKLGIPTLI 123 GF+RKLS +NVKTVMRFLKGVK SK L EFKPD VIGTGGYVCGPVVYAA+K+GIPT++ Sbjct: 61 GFKRKLSFENVKTVMRFLKGVKKSKSYLAEFKPDAVIGTGGYVCGPVVYAAAKMGIPTIV 120 Query: 124 HEQNAIPGLTNRFLSRYADTVAVSFEGTESAFPGSKHVIYTGNPRATTVTAASPQRGFAS 183 HEQN++PG+TN+FLS+Y + VA+ FE +S FP K V++TGNPRA+ V + R A Sbjct: 121 HEQNSLPGITNKFLSKYVNKVAICFEEAKSHFPSEK-VVFTGNPRASEVVSIKTGRSLAE 179 Query: 184 LGIPEGSTVVLMVGGSGGARAINQAMIEMAPFVGKGNGVHYVYVTGEAYFEETRKALREK 243 + E VL+ GGS GA IN+A+I+M V K +Y+TGE ++E+ L+ K Sbjct: 180 FKLSEDKKTVLIFGGSRGAAPINRAVIDMQD-VLKTRDYQVLYITGEVHYEKVMNELKSK 238 Query: 244 LGSEPSWLHLLPYVHNMPEVLACTSLIVNRAGASFLAEITALGIPSVLIPSPNVTNNHQE 303 ++ P++H MPE L +IV RAGA+ +AEITALGIPSVLIPSP VT NHQE Sbjct: 239 GAADNMVTK--PFLHQMPEYLKAIDVIVARAGAATIAEITALGIPSVLIPSPYVTANHQE 296 Query: 304 ANARQLEREGAAVVLLEKDLNGQSLMEAVQKIIGAEPVRRQMSEASRRLGKRDSAALVVS 363 NAR L + AA+VL E +L+G+ L+EA+ +I+ E ++MSE ++ LG D+AA + S Sbjct: 297 VNARSLGQHDAAIVLKETELSGEKLIEALDRIVLNEQTLKEMSERTKSLGVPDAAARLYS 356 Query: 364 ELRRL 368 L L Sbjct: 357 VLEEL 361 >ref|NP_833630.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Bacillus cereus ATCC 14579] sp|Q812W5|MUG1_BACCR UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 1 (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase 1) gb|AAP10831.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Bacillus cereus ATCC 14579] Length = 364 Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust. Identities = 193/368 (52%), Positives = 262/368 (71%), Gaps = 4/368 (1%) Query: 4 MRIVLSGGGTGGHIYPAVAVARQLQAEDKDPAFLYIGGKRGLESKLVPNENLPFQSIDIT 63 MR+++SGGGTGGHIYPA+A+ R+++ + + FLYIG + GLES +VP +PFQSI I+ Sbjct: 1 MRVLVSGGGTGGHIYPALALIREIKKLNPEARFLYIGTENGLESTIVPKAGIPFQSIVIS 60 Query: 64 GFRRKLSMDNVKTVMRFLKGVKASKEMLREFKPDVVIGTGGYVCGPVVYAASKLGIPTLI 123 GF+RK+S+DNVKTVMRFLKGV+ SK +R F PD+VIGTGGYVCGPVVYAA+KLGIPT++ Sbjct: 61 GFKRKISLDNVKTVMRFLKGVQDSKRYIRRFNPDIVIGTGGYVCGPVVYAAAKLGIPTIV 120 Query: 124 HEQNAIPGLTNRFLSRYADTVAVSFEGTESAFPGSKHVIYTGNPRATTVTAASPQRGFAS 183 HEQN++PG+TN+FLSRY D VAV FE FP SK V+ TGNPRA+ V + +G S Sbjct: 121 HEQNSVPGVTNKFLSRYVDKVAVCFEAAIEHFPESK-VVMTGNPRASEVMEQNGMKGKRS 179 Query: 184 LGIPEGSTVVLMVGGSGGARAINQAMIEMAPFVGKGNGVHYVYVTGEAYFEETRKALREK 243 +G+ VL+ GGS GAR IN A +E G +YVTGE ++++ +A+++K Sbjct: 180 VGLSLPKKSVLIFGGSRGARPINDAFVEAIEQFG-NKSYEILYVTGEVHYDKVMEAVKQK 238 Query: 244 LGSEPSWLHLLPYVHNMPEVLACTSLIVNRAGASFLAEITALGIPSVLIPSPNVTNNHQE 303 PS + + P++HNMPEVL L+V+RAGA+ LAE+TALG PSVLIPSP VTNNHQE Sbjct: 239 --GNPSNVIIKPFIHNMPEVLTGVDLVVSRAGATTLAELTALGKPSVLIPSPYVTNNHQE 296 Query: 304 ANARQLEREGAAVVLLEKDLNGQSLMEAVQKIIGAEPVRRQMSEASRRLGKRDSAALVVS 363 NAR + +GAA +LLEKDL ++L+ + +I+ + M A+++LG D+A + Sbjct: 297 KNARSVVDKGAAKMLLEKDLTAETLIRDIDEILLDTQTLQNMKLAAKQLGIPDAANKLYE 356 Query: 364 ELRRLAAK 371 + +L K Sbjct: 357 VMNKLVKK 364 >ref|NP_657879.1| Glyco_transf_28, Glycosyltransferase family 28 [Bacillus anthracis A2012] ref|NP_846289.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Bacillus anthracis str. Ames] sp|Q81JG5|MUG1_BACAA UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 1 (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase 1) gb|AAP27775.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Bacillus anthracis str. Ames] Length = 364 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 192/368 (52%), Positives = 261/368 (70%), Gaps = 4/368 (1%) Query: 4 MRIVLSGGGTGGHIYPAVAVARQLQAEDKDPAFLYIGGKRGLESKLVPNENLPFQSIDIT 63 MR+++SGGGTGGHIYPA+A+ R+++ + + FLYIG + GLES +VP +PFQSI I+ Sbjct: 1 MRVLVSGGGTGGHIYPALALIREIKKLNPEARFLYIGTENGLESTIVPKAGIPFQSIVIS 60 Query: 64 GFRRKLSMDNVKTVMRFLKGVKASKEMLREFKPDVVIGTGGYVCGPVVYAASKLGIPTLI 123 GF+RK+S+DNVKTVMRFLKGV+ SK +R F PD+VIGTGGYVCGPVVYAA+KLGIPT++ Sbjct: 61 GFKRKISLDNVKTVMRFLKGVQDSKRYIRRFNPDIVIGTGGYVCGPVVYAAAKLGIPTIV 120 Query: 124 HEQNAIPGLTNRFLSRYADTVAVSFEGTESAFPGSKHVIYTGNPRATTVTAASPQRGFAS 183 HEQN++PG+TN+FLSRY D VAV FE FP SK V+ TGNPRA+ V + +G S Sbjct: 121 HEQNSVPGVTNKFLSRYVDKVAVCFEAAAEHFPQSK-VVMTGNPRASEVMDQNGMKGKRS 179 Query: 184 LGIPEGSTVVLMVGGSGGARAINQAMIEMAPFVGKGNGVHYVYVTGEAYFEETRKALREK 243 +G+ VL+ GGS GAR IN A +E G +YVTGE ++++ +A+++K Sbjct: 180 VGLSLPKKSVLIFGGSRGARPINDAFVEAIEQFGN-KSYEILYVTGEVHYDKVMEAVKQK 238 Query: 244 LGSEPSWLHLLPYVHNMPEVLACTSLIVNRAGASFLAEITALGIPSVLIPSPNVTNNHQE 303 P+ + + P++HNMPEVL L+V+RAGA+ LAE+TALG PSVLIPSP VTNNHQE Sbjct: 239 --GNPNNVIIKPFIHNMPEVLTGVDLVVSRAGATTLAELTALGKPSVLIPSPYVTNNHQE 296 Query: 304 ANARQLEREGAAVVLLEKDLNGQSLMEAVQKIIGAEPVRRQMSEASRRLGKRDSAALVVS 363 NAR + +GAA +LLEKDL ++L+ + +I+ + M A+ +LG D+A + Sbjct: 297 KNARSVVDKGAAKMLLEKDLTAETLIRDIDEILLDAQTLQNMKLAAGQLGIPDAANKLYE 356 Query: 364 ELRRLAAK 371 + +L K Sbjct: 357 VMNKLVKK 364 >ref|NP_980251.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Bacillus cereus ATCC 10987] gb|AAS42859.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Bacillus cereus ATCC 10987] Length = 364 Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust. Identities = 192/368 (52%), Positives = 260/368 (70%), Gaps = 4/368 (1%) Query: 4 MRIVLSGGGTGGHIYPAVAVARQLQAEDKDPAFLYIGGKRGLESKLVPNENLPFQSIDIT 63 MR+++SGGGTGGHIYPA+A+ R+++ + + FLYIG + GLES +VP +PFQSI I+ Sbjct: 1 MRVLVSGGGTGGHIYPALALIREIKKLNPEARFLYIGTENGLESTIVPKAGIPFQSIVIS 60 Query: 64 GFRRKLSMDNVKTVMRFLKGVKASKEMLREFKPDVVIGTGGYVCGPVVYAASKLGIPTLI 123 GF+RK+S+DNVKTVMRFLKGV+ SK +R F PD+VIGTGGYVCGPVVYAA+KLGIPT++ Sbjct: 61 GFKRKISLDNVKTVMRFLKGVQDSKRYIRRFNPDIVIGTGGYVCGPVVYAAAKLGIPTIV 120 Query: 124 HEQNAIPGLTNRFLSRYADTVAVSFEGTESAFPGSKHVIYTGNPRATTVTAASPQRGFAS 183 HEQN++PG+TN+FLSRY D VAV FE FP SK V+ TGNPRA+ V + +G S Sbjct: 121 HEQNSVPGVTNKFLSRYVDKVAVCFEAAAEHFPQSK-VVMTGNPRASEVMDQNGMKGKRS 179 Query: 184 LGIPEGSTVVLMVGGSGGARAINQAMIEMAPFVGKGNGVHYVYVTGEAYFEETRKALREK 243 +G+ VL+ GGS GAR IN A +E G +YVTGE ++++ A+++K Sbjct: 180 VGLSLPKKSVLIFGGSRGARPINDAFVEAIEQFGN-KSYEILYVTGEVHYDKVMDAVKQK 238 Query: 244 LGSEPSWLHLLPYVHNMPEVLACTSLIVNRAGASFLAEITALGIPSVLIPSPNVTNNHQE 303 P+ + + P++HNMPEVL L+V+RAGA+ LAE+TALG PSVLIPSP VTNNHQE Sbjct: 239 --GNPNNVIIKPFIHNMPEVLTGVDLVVSRAGATTLAELTALGKPSVLIPSPYVTNNHQE 296 Query: 304 ANARQLEREGAAVVLLEKDLNGQSLMEAVQKIIGAEPVRRQMSEASRRLGKRDSAALVVS 363 NAR + +GAA +LLEKDL ++L+ + +I+ + M A+ +LG D+A + Sbjct: 297 KNARSVVDKGAAKMLLEKDLTAETLIRDIDEILLDAQTLQNMKLAAGQLGIPDAANKLYE 356 Query: 364 ELRRLAAK 371 + +L K Sbjct: 357 VMNKLVKK 364 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.134 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 540,530,666 Number of extensions: 22833933 Number of successful extensions: 73892 Number of sequences better than 1.0e-05: 519 Number of HSP's gapped: 72985 Number of HSP's successfully gapped: 523 Length of query: 374 Length of database: 757,237,578 Length adjustment: 127 Effective length of query: 247 Effective length of database: 412,420,005 Effective search space: 101867741235 Effective search space used: 101867741235 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 127 (53.5 bits)