BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0264.0038.p
         (91 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_243425.1| cell-division protein (septum formation) [Bacil...    55   4e-07
ref|NP_692393.1| cell-division protein [Oceanobacillus iheyensis...    55   6e-07

>ref|NP_243425.1| cell-division protein (septum formation) [Bacillus halodurans]
 pir||G83969 cell-division protein (septum formation) ftsA [imported] - Bacillus
           halodurans (strain C-125)
 dbj|BAB06278.1| cell-division protein (septum formation) [Bacillus halodurans]
          Length = 425

 Score = 55.5 bits (132), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 1   MPGVLKAAQTELAASVRIAVPDYIGVRDPGFTGGVGILHNVVRSFXXXXXXXXXXXXXTV 60
           MPGVL+ A+  L  +VR+A+PDYIGVR+P +T GVG++    ++                
Sbjct: 331 MPGVLELAKETLGRNVRVAIPDYIGVREPQYTTGVGLIQFAYKNVKIQGKEVAAAVAEAG 390

Query: 61  NRNKQNAVPSQD---TVKKPGLVERLKNMFSEFI 91
              +Q     ++   T + PG+  ++KN F  F+
Sbjct: 391 VEQEQRPKKEKERSRTNEGPGVKSKVKNWFKVFL 424


>ref|NP_692393.1| cell-division protein [Oceanobacillus iheyensis HTE831]
 dbj|BAC13428.1| cell-division protein (septum formation) [Oceanobacillus iheyensis
           HTE831]
          Length = 428

 Score = 55.1 bits (131), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 32/44 (72%)

Query: 1   MPGVLKAAQTELAASVRIAVPDYIGVRDPGFTGGVGILHNVVRS 44
           MPG L+ AQ    ++VR+A+PDYIGVR+P FT G+GIL    R+
Sbjct: 331 MPGSLELAQDLFYSNVRVAIPDYIGVREPQFTSGIGILQFAYRN 374


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.319    0.136    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 115,613,290
Number of extensions: 3112097
Number of successful extensions: 4654
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 4654
Number of HSP's successfully gapped: 2
Length of query: 91
Length of database: 757,237,578
Length adjustment: 59
Effective length of query: 32
Effective length of database: 597,046,737
Effective search space: 19105495584
Effective search space used: 19105495584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 120 (50.8 bits)