BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0264.0025.p (1030 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_831929.1| Isoleucyl-tRNA synthetase, mupirocin resistant ... 1239 0.0 ref|NP_978553.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC... 1234 0.0 ref|NP_844574.1| isoleucyl-tRNA synthetase [Bacillus anthracis s... 1227 0.0 ref|NP_656037.1| tRNA-synt_1, tRNA synthetases class I (I, L, M ... 1226 0.0 ref|NP_691283.1| isoleucyl-tRNA synthetase [Oceanobacillus iheye... 1169 0.0 >ref|NP_831929.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus cereus ATCC 14579] gb|AAP09130.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus cereus ATCC 14579] Length = 1035 Score = 1239 bits (3207), Expect = 0.0, Method: Compositional matrix adjust. Identities = 587/1012 (58%), Positives = 752/1012 (74%), Gaps = 8/1012 (0%) Query: 1 MQKVDVKEKARARDVRILKKWSDENTFRRSMENREGRPNYVFYEGPPTANGVPHIGHVLG 60 M+KVDVKE A R++RI K+W+++N F +S++NREG ++VFYEGPPTANG+PH+GH LG Sbjct: 3 MEKVDVKESAVGREMRIRKQWNEQNIFEQSIQNREGAQSFVFYEGPPTANGLPHVGHALG 62 Query: 61 RVIKDFIGRYQTMKGYRVVRKAGWDTHGLPVELGVQKKLGISGKQEIEEYGVEKFIKECK 120 R IKD + RY+TM GY+V+RKAGWDTHGLPVELGV+K+LGISGK EIEEYG+E FI++CK Sbjct: 63 RTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEEYGIEPFIQKCK 122 Query: 121 ESVFGYEKQWREFTEAIGYWTDLDHPYVTLDNTYIESVWNILATVHEKGLLYRGHRVSPY 180 ESVF YEKQWREFTE+IGYW D+D PYVTL N YIESVW+IL T+HEKGLLY+GHRVSPY Sbjct: 123 ESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTIHEKGLLYKGHRVSPY 182 Query: 181 CPSCQTTLSSHEVAQGYKTVKDLSATAKFKLNGS-GDYVLAWTTTPWTLPAHMALAMNPD 239 CPSCQT+LSSHEVAQGYKTVKDLSAT KFK+ S +Y L WTTTPWTLPA++ALA++P+ Sbjct: 183 CPSCQTSLSSHEVAQGYKTVKDLSATVKFKVKDSENEYFLGWTTTPWTLPANVALAVHPN 242 Query: 240 MEYVRARQEDGVYVLAKNLAEEVLKGEYTILSTHKGTDFIGQSYTPPFGYIQAEKHNVIV 299 MEYV+A+QE VY++AK +EVLK Y +LS HKG + + SYT PF + ++ Sbjct: 243 MEYVKAKQESHVYIVAKERVQEVLKENYEVLSVHKGEELLNTSYTAPFPMKEVTNGYRVI 302 Query: 300 GASFVTDSSGTGIVHMAPAHGEDDYKSCRENGISFVNVVDTSGKYTDVVSDFAGRFVKDC 359 A FVT SGTG+VH+APA+GEDDY+ + G+SF++VVD G+YT+ V G+FVKDC Sbjct: 303 AADFVTGDSGTGLVHIAPAYGEDDYRVVQSEGLSFLHVVDEKGEYTEAVPFLKGKFVKDC 362 Query: 360 DLDIVKVLSEKGLLYSKEKYEHSYPFCWRCDTPLLYYATDSWFIQTTAIKDQLIANNNSV 419 D+DIV+ L+++GLLY KEKYEHSYP CWRCD+PLLYYA +SW I+TTAIKD + NN+SV Sbjct: 363 DVDIVRYLAKEGLLYHKEKYEHSYPHCWRCDSPLLYYAGESWLIRTTAIKDTFLQNNDSV 422 Query: 420 DWYPDHVREGRFGKFLEELVDWNISRNRYWGTPLNIWICQDTGKEFAPHSIAELRSMAIG 479 WYPDH++ GRFGKFLE +VDWNISRNRYWGTPLN+W C+ +FAP SIAELR + Sbjct: 423 TWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESCDHQFAPKSIAELRKHSTK 482 Query: 480 EVPEDIELHKPYVDNIKLRSPFSEGGVMVRTSEVIDVWFDSGSMPFAQSHYPFENQDKFE 539 E PED+ELHKPYVD +++ GG M RT EVIDVWFDSGSMPFAQ HYPFEN++ FE Sbjct: 483 ETPEDLELHKPYVDEVQVCCGKC-GGTMNRTPEVIDVWFDSGSMPFAQYHYPFENKELFE 541 Query: 540 DQYPADMICEGIDQTRGWFYSLLAVSTLFKGKAPYKAVIAHGHIFDENGQKMSKSKGNVI 599 +Q+PAD+I EGIDQTRGWFYSLLAVS L+ GK PYK V++ GH+ DE GQKMSKSKGN + Sbjct: 542 EQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNAL 601 Query: 600 DPWEIMNEYGTDAFRWAILSDSAPWNNKRFSRGLVGETKSKIVDTLVNTHAFLTLYAGID 659 DP ++++++G DA RWA+L DSAPWN KRFS V E KSK VDTLVN ++F LYA +D Sbjct: 602 DPVDLVDKFGADALRWALLVDSAPWNAKRFSERTVLEAKSKFVDTLVNVYSFYVLYANLD 661 Query: 660 GYDPADHPFKVSGHKLDRWILSRLNSLILLVDKGLAVNDFVNTSKAVENFVDELSNWYIR 719 Y+P + + V KLD W+LSRL+S V L F N ++ + VDE+SNWY+R Sbjct: 662 EYNPKE-TYDVKLTKLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVR 720 Query: 720 RSRDRFWGSGLGEEKLDAYRXXXXXXXXXXXXMAPFTPMLSEDIFMNLGGGESVHLADYP 779 RSR+RFW SG+ EK AY +APFTP ++EDI +NL G SVHLADYP Sbjct: 721 RSRNRFWESGMNAEKAAAYETLHEVLVTISKLIAPFTPFVAEDIHLNLEGS-SVHLADYP 779 Query: 780 VADESLIDLELEQDMESARQIVELARNVRNETGIKNRQPLSELIV--SIDRSFHLADYEE 837 V +ESL+ +LE +M++ Q+VEL R+ RN+ +K +QPL+EL++ + Y + Sbjct: 780 VVNESLLQPKLEAEMDAVLQVVELGRSNRNQHSLKVKQPLAELVLLEHNENDMDWESYRD 839 Query: 838 IIKDEINVKEIVVEHSDSGFVDFTLKLNLKVAGKKYGKNVGFLQGFLKALDSEATRKAVQ 897 I+ DE+NVK VE ++ + + LKLN K AG K+GKNV + G+LK L E + V Sbjct: 840 IVMDELNVKAFHVELDETKYTSYQLKLNFKTAGPKFGKNVNAVNGWLKQLSQEEVQNFVS 899 Query: 898 EG-VIAIVSPEGEELQITAEELLVEKQAKPGFASASGYGLTVALNTEITPELEQEGWVRE 956 G + +PEG E+ +T E++LVEK AK GF++ + TV L+T +T EL QEG RE Sbjct: 900 TGRAVYEATPEG-EVVVTGEDVLVEKVAKSGFSNTTNGQYTVMLDTNVTEELLQEGVARE 958 Query: 957 IVRAVQDYRKRLDLPIEKRIALTLKVDGELKAAVTAFEHVLRENVLVTTVDF 1008 +RAVQ+YRK+L+LP+ R+ + L + EL+ +T + +L EN+LV F Sbjct: 959 FIRAVQEYRKQLNLPVNLRVDIILDTEEELQRTLTNHKDLLEENLLVKQFTF 1010 >ref|NP_978553.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987] gb|AAS41161.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987] Length = 1033 Score = 1234 bits (3193), Expect = 0.0, Method: Compositional matrix adjust. Identities = 582/1011 (57%), Positives = 748/1011 (73%), Gaps = 6/1011 (0%) Query: 1 MQKVDVKEKARARDVRILKKWSDENTFRRSMENREGRPNYVFYEGPPTANGVPHIGHVLG 60 M+KVDVKE A R+ RI K+W++++ F +S++NREG ++VFYEGPPTANG+PH+GH LG Sbjct: 1 MKKVDVKESAVGRETRIRKQWNEQSIFEQSIQNREGAQSFVFYEGPPTANGLPHVGHALG 60 Query: 61 RVIKDFIGRYQTMKGYRVVRKAGWDTHGLPVELGVQKKLGISGKQEIEEYGVEKFIKECK 120 R IKD + RY+TM GY+V+RKAGWDTHGLPVELGV+K+LGISGK EIEEYG+E FIK+CK Sbjct: 61 RTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEEYGIEPFIKKCK 120 Query: 121 ESVFGYEKQWREFTEAIGYWTDLDHPYVTLDNTYIESVWNILATVHEKGLLYRGHRVSPY 180 ESVF YEKQWREFTE+IGYW D+D PYVTL+N YIESVW+IL T+HEKGLLY+GHRVSPY Sbjct: 121 ESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKGLLYKGHRVSPY 180 Query: 181 CPSCQTTLSSHEVAQGYKTVKDLSATAKFKLNGS-GDYVLAWTTTPWTLPAHMALAMNPD 239 CPSCQT+LSSHEVAQGYKTVKDLSAT KFK+ S +Y L WTTTPWTLPA++ALA++P+ Sbjct: 181 CPSCQTSLSSHEVAQGYKTVKDLSATVKFKVKDSENEYFLGWTTTPWTLPANVALAVHPN 240 Query: 240 MEYVRARQEDGVYVLAKNLAEEVLKGEYTILSTHKGTDFIGQSYTPPFGYIQAEKHNVIV 299 MEYV+A+QE VY++AK ++VLK +Y +LS HKG + + SYT PF + ++ Sbjct: 241 MEYVKAKQEGYVYIVAKERVQDVLKEDYEVLSVHKGEELVNTSYTAPFPMKEVTNGYHVI 300 Query: 300 GASFVTDSSGTGIVHMAPAHGEDDYKSCRENGISFVNVVDTSGKYTDVVSDFAGRFVKDC 359 A FVT SGTG+VH+APA+GEDDY+ + G+SF++VVD G+YT+ V G+FVKD Sbjct: 301 AADFVTADSGTGLVHIAPAYGEDDYRVVQSEGLSFLHVVDEKGEYTEAVPFLKGKFVKDS 360 Query: 360 DLDIVKVLSEKGLLYSKEKYEHSYPFCWRCDTPLLYYATDSWFIQTTAIKDQLIANNNSV 419 D+DIV+ L+++GLLY KEKYEHSYP CWRCD+PLLYYA +SW I+TTAIKD + NN++V Sbjct: 361 DVDIVRYLAKEGLLYHKEKYEHSYPHCWRCDSPLLYYAGESWLIRTTAIKDTFLQNNDTV 420 Query: 420 DWYPDHVREGRFGKFLEELVDWNISRNRYWGTPLNIWICQDTGKEFAPHSIAELRSMAIG 479 WYPDH++ GRFGKFLE +VDWNISRNRYWGTPLN+W C+ +FAP SIA+LR + Sbjct: 421 TWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESCDHQFAPKSIADLRKHSTK 480 Query: 480 EVPEDIELHKPYVDNIKLRSPFSEGGVMVRTSEVIDVWFDSGSMPFAQSHYPFENQDKFE 539 E PED+ELHKPYVD +++ S GG M RT EVIDVWFDSGSMPFAQ HYPFEN++ FE Sbjct: 481 ETPEDLELHKPYVDEVQV-SCEKCGGAMNRTPEVIDVWFDSGSMPFAQYHYPFENKELFE 539 Query: 540 DQYPADMICEGIDQTRGWFYSLLAVSTLFKGKAPYKAVIAHGHIFDENGQKMSKSKGNVI 599 DQ+PAD+I EGIDQTRGWFYSLLAVS L+ GK PYK V++ GH+ DE GQKMSKSKGN + Sbjct: 540 DQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNAL 599 Query: 600 DPWEIMNEYGTDAFRWAILSDSAPWNNKRFSRGLVGETKSKIVDTLVNTHAFLTLYAGID 659 DP +++N++G DA RWA+L DSAPWN KRFS V E KSK VDTLVN ++F LYA +D Sbjct: 600 DPVDLVNQFGADALRWALLVDSAPWNAKRFSERTVLEAKSKFVDTLVNVYSFYVLYANLD 659 Query: 660 GYDPADHPFKVSGHKLDRWILSRLNSLILLVDKGLAVNDFVNTSKAVENFVDELSNWYIR 719 Y+P D + V KLD W+LSRL+S V L F N ++ + VDE+SNWY+R Sbjct: 660 EYNP-DETYDVKRTKLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIATLVDEVSNWYVR 718 Query: 720 RSRDRFWGSGLGEEKLDAYRXXXXXXXXXXXXMAPFTPMLSEDIFMNLGGGESVHLADYP 779 RSR+RFW SG+ EK AY +APFTP ++EDI +NL G SVHL DYP Sbjct: 719 RSRNRFWESGMNAEKAAAYETLHEVLVTISKLIAPFTPFVAEDIHLNLTGS-SVHLEDYP 777 Query: 780 VADESLIDLELEQDMESARQIVELARNVRNETGIKNRQPLSELIV--SIDRSFHLADYEE 837 V +ESL+ +LE +M++ Q+VEL R+ RN+ +K +QPL+EL++ + Y + Sbjct: 778 VVNESLLQPKLEAEMDAVLQVVELGRSNRNQHSLKVKQPLAELVLLEHNENDMDWESYRD 837 Query: 838 IIKDEINVKEIVVEHSDSGFVDFTLKLNLKVAGKKYGKNVGFLQGFLKALDSEATRKAVQ 897 I+ DE+NVK VE ++ + + LKLN K AG K+GKNV + +LK L + + V Sbjct: 838 IVMDELNVKAFHVELDETKYTSYQLKLNFKTAGPKFGKNVNAVNDWLKQLSQDEVQNFVT 897 Query: 898 EGVIAIVSPEGEELQITAEELLVEKQAKPGFASASGYGLTVALNTEITPELEQEGWVREI 957 + GEE+ +T E++LVEK AK GF++ + TV L+T +T EL QEG RE Sbjct: 898 TERAVYEAASGEEVVVTTEDVLVEKVAKSGFSNTTNGQYTVMLDTNVTEELLQEGVAREF 957 Query: 958 VRAVQDYRKRLDLPIEKRIALTLKVDGELKAAVTAFEHVLRENVLVTTVDF 1008 +RAVQ+YRK+L+LP+ R+ + L + EL+ +T + +L EN+LV F Sbjct: 958 IRAVQEYRKQLNLPVNLRVDVILDTEEELQQTLTNHKQLLEENLLVKQFTF 1008 >ref|NP_844574.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Ames] gb|AAP26060.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Ames] Length = 1033 Score = 1227 bits (3174), Expect = 0.0, Method: Compositional matrix adjust. Identities = 581/1012 (57%), Positives = 751/1012 (74%), Gaps = 8/1012 (0%) Query: 1 MQKVDVKEKARARDVRILKKWSDENTFRRSMENREGRPNYVFYEGPPTANGVPHIGHVLG 60 M+KVDVKE A R++RI K+W+++N F +S++NREG ++VFYEGPPTANG+PH+GH LG Sbjct: 1 MKKVDVKESAVGREMRIRKQWNEQNIFEQSIQNREGAQSFVFYEGPPTANGLPHVGHALG 60 Query: 61 RVIKDFIGRYQTMKGYRVVRKAGWDTHGLPVELGVQKKLGISGKQEIEEYGVEKFIKECK 120 R IKD + RY+TM GY+V+RKAGWDTHGLPVELGV+K+LGISGK EIEEYG+E FIK+CK Sbjct: 61 RTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEEYGIEPFIKKCK 120 Query: 121 ESVFGYEKQWREFTEAIGYWTDLDHPYVTLDNTYIESVWNILATVHEKGLLYRGHRVSPY 180 ESVF YEKQWREFTE+IGYW D+D PYVTL+N YIESVW+IL T+HEKGLLY+GHRVSPY Sbjct: 121 ESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKGLLYKGHRVSPY 180 Query: 181 CPSCQTTLSSHEVAQGYKTVKDLSATAKFKLNGS-GDYVLAWTTTPWTLPAHMALAMNPD 239 CPSCQT+LSSHEVAQGYKTVKDLSAT KFK+ S +Y L WTTTPWTLPA++ALA++P+ Sbjct: 181 CPSCQTSLSSHEVAQGYKTVKDLSATVKFKVKDSENEYFLGWTTTPWTLPANVALAVHPN 240 Query: 240 MEYVRARQEDGVYVLAKNLAEEVLKGEYTILSTHKGTDFIGQSYTPPFGYIQAEKHNVIV 299 MEYV+A+QE VY++AK ++VLK Y +LS HKG + + SYT PF + ++ Sbjct: 241 MEYVKAKQEGHVYIVAKERVQDVLKENYEVLSVHKGEELLNISYTAPFPMKEVTNGYRVI 300 Query: 300 GASFVTDSSGTGIVHMAPAHGEDDYKSCRENGISFVNVVDTSGKYTDVVSDFAGRFVKDC 359 GA FVT SGTG+VH+APA+GEDDY+ + G+SF++VVD G+YT+ V G+FVKDC Sbjct: 301 GADFVTADSGTGLVHIAPAYGEDDYRVVQSEGLSFLHVVDEKGEYTEAVPFLKGKFVKDC 360 Query: 360 DLDIVKVLSEKGLLYSKEKYEHSYPFCWRCDTPLLYYATDSWFIQTTAIKDQLIANNNSV 419 D+DIV+ L+++ LLY KEKYEHSYP CWRCD+PLLYYA +SW I+TTAIKD + NN++V Sbjct: 361 DVDIVRYLAKEDLLYHKEKYEHSYPHCWRCDSPLLYYAGESWLIRTTAIKDTFLQNNDTV 420 Query: 420 DWYPDHVREGRFGKFLEELVDWNISRNRYWGTPLNIWICQDTGKEFAPHSIAELRSMAIG 479 WYPDH++ GRFGKFLE +VDWNISRNRYWGTPLN+W C+ +FAP SIA+LR ++ Sbjct: 421 TWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECERCDHQFAPKSIADLRKHSMK 480 Query: 480 EVPEDIELHKPYVDNIKLRSPFSEGGVMVRTSEVIDVWFDSGSMPFAQSHYPFENQDKFE 539 E PED+ELHKPYVD +++ G M RT EVIDVWFDSGSMPFAQ HYPFEN++ FE Sbjct: 481 ETPEDLELHKPYVDEVQVCCEKC-GSTMNRTPEVIDVWFDSGSMPFAQYHYPFENKELFE 539 Query: 540 DQYPADMICEGIDQTRGWFYSLLAVSTLFKGKAPYKAVIAHGHIFDENGQKMSKSKGNVI 599 +Q+PAD+I EGIDQTRGWFYSLLAVS L+ GK PYK V++ GH+ DE GQKMSKSKGN + Sbjct: 540 EQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNAL 599 Query: 600 DPWEIMNEYGTDAFRWAILSDSAPWNNKRFSRGLVGETKSKIVDTLVNTHAFLTLYAGID 659 DP +++ ++G DA RWA+L DSA WN KRFS V E KSK VDTLVN ++F LYA +D Sbjct: 600 DPVDLVGKFGADALRWALLVDSALWNAKRFSERTVLEAKSKFVDTLVNVYSFYVLYANLD 659 Query: 660 GYDPADHPFKVSGHKLDRWILSRLNSLILLVDKGLAVNDFVNTSKAVENFVDELSNWYIR 719 Y+P + + V KLD W+LSRL+S V L F N ++ + VDE+SNWY+R Sbjct: 660 EYNP-NETYDVKRTKLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVR 718 Query: 720 RSRDRFWGSGLGEEKLDAYRXXXXXXXXXXXXMAPFTPMLSEDIFMNLGGGESVHLADYP 779 RSR+RFW SG+ EK AY +APFTP ++ED+ +NL G SVHL DYP Sbjct: 719 RSRNRFWESGMNAEKAAAYETLHDVLVTISKLIAPFTPFVAEDVHLNLTGS-SVHLEDYP 777 Query: 780 VADESLIDLELEQDMESARQIVELARNVRNETGIKNRQPLSELIV--SIDRSFHLADYEE 837 V +ESL+ +LE +M++ Q+VEL R+ RN+ +K +QPL+EL++ + Y + Sbjct: 778 VVNESLLQPKLEAEMDAVLQVVELGRSNRNQHSLKVKQPLAELVLLEHNENDMDWESYRD 837 Query: 838 IIKDEINVKEIVVEHSDSGFVDFTLKLNLKVAGKKYGKNVGFLQGFLKALDSEATRKAVQ 897 I+ DE+NVK VE ++ + + LKLN K AG K+GKNV + G+LK L + + V Sbjct: 838 IVMDELNVKAFHVELDETKYTSYQLKLNFKKAGPKFGKNVNAVNGWLKQLSQDEVQNFVS 897 Query: 898 -EGVIAIVSPEGEELQITAEELLVEKQAKPGFASASGYGLTVALNTEITPELEQEGWVRE 956 E + V+P GEE+ +T E++LVEK AK GF++ + TV L+T +T EL QEG RE Sbjct: 898 TERAVYEVAP-GEEIVVTTEDVLVEKVAKSGFSNTTNGQYTVMLDTNVTEELLQEGVARE 956 Query: 957 IVRAVQDYRKRLDLPIEKRIALTLKVDGELKAAVTAFEHVLRENVLVTTVDF 1008 +RAVQ+YRK+L+LP+ R+ + L + EL+ +T + +L EN+LV F Sbjct: 957 FIRAVQEYRKQLNLPVNLRVDVILDTEEELQQTLTNHKELLEENLLVKQFTF 1008 >ref|NP_656037.1| tRNA-synt_1, tRNA synthetases class I (I, L, M and V) [Bacillus anthracis A2012] Length = 1033 Score = 1226 bits (3173), Expect = 0.0, Method: Compositional matrix adjust. Identities = 581/1012 (57%), Positives = 751/1012 (74%), Gaps = 8/1012 (0%) Query: 1 MQKVDVKEKARARDVRILKKWSDENTFRRSMENREGRPNYVFYEGPPTANGVPHIGHVLG 60 M+KVDVKE A R++RI K+W+++N F +S++NREG ++VFYEGPPTANG+PH+GH LG Sbjct: 1 MKKVDVKESAVGREMRIRKQWNEQNIFEQSIQNREGAQSFVFYEGPPTANGLPHVGHALG 60 Query: 61 RVIKDFIGRYQTMKGYRVVRKAGWDTHGLPVELGVQKKLGISGKQEIEEYGVEKFIKECK 120 R IKD + RY+TM GY+V+RKAGWDTHGLPVELGV+K+LGISGK EIEEYG+E FIK+CK Sbjct: 61 RTIKDVVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEEYGIEPFIKKCK 120 Query: 121 ESVFGYEKQWREFTEAIGYWTDLDHPYVTLDNTYIESVWNILATVHEKGLLYRGHRVSPY 180 ESVF YEKQWREFTE+IGYW D+D PYVTL+N YIESVW+IL T+HEKGLLY+GHRVSPY Sbjct: 121 ESVFTYEKQWREFTESIGYWVDMDDPYVTLENPYIESVWHILGTIHEKGLLYKGHRVSPY 180 Query: 181 CPSCQTTLSSHEVAQGYKTVKDLSATAKFKLNGS-GDYVLAWTTTPWTLPAHMALAMNPD 239 CPSCQT+LSSHEVAQGYKTVKDLSAT KFK+ S +Y L WTTTPWTLPA++ALA++P+ Sbjct: 181 CPSCQTSLSSHEVAQGYKTVKDLSATVKFKVKDSENEYFLXWTTTPWTLPANVALAVHPN 240 Query: 240 MEYVRARQEDGVYVLAKNLAEEVLKGEYTILSTHKGTDFIGQSYTPPFGYIQAEKHNVIV 299 MEYV+A+QE VY++AK ++VLK Y +LS HKG + + SYT PF + ++ Sbjct: 241 MEYVKAKQEGHVYIVAKERVQDVLKENYEVLSVHKGEELLNISYTAPFPMKEVTNGYRVI 300 Query: 300 GASFVTDSSGTGIVHMAPAHGEDDYKSCRENGISFVNVVDTSGKYTDVVSDFAGRFVKDC 359 GA FVT SGTG+VH+APA+GEDDY+ + G+SF++VVD G+YT+ V G+FVKDC Sbjct: 301 GADFVTADSGTGLVHIAPAYGEDDYRVVQSEGLSFLHVVDEKGEYTEAVPFLKGKFVKDC 360 Query: 360 DLDIVKVLSEKGLLYSKEKYEHSYPFCWRCDTPLLYYATDSWFIQTTAIKDQLIANNNSV 419 D+DIV+ L+++ LLY KEKYEHSYP CWRCD+PLLYYA +SW I+TTAIKD + NN++V Sbjct: 361 DVDIVRYLAKEDLLYHKEKYEHSYPHCWRCDSPLLYYAGESWLIRTTAIKDTFLQNNDTV 420 Query: 420 DWYPDHVREGRFGKFLEELVDWNISRNRYWGTPLNIWICQDTGKEFAPHSIAELRSMAIG 479 WYPDH++ GRFGKFLE +VDWNISRNRYWGTPLN+W C+ +FAP SIA+LR ++ Sbjct: 421 TWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECERCDHQFAPKSIADLRKHSMK 480 Query: 480 EVPEDIELHKPYVDNIKLRSPFSEGGVMVRTSEVIDVWFDSGSMPFAQSHYPFENQDKFE 539 E PED+ELHKPYVD +++ G M RT EVIDVWFDSGSMPFAQ HYPFEN++ FE Sbjct: 481 ETPEDLELHKPYVDEVQVCCEKC-GSTMNRTPEVIDVWFDSGSMPFAQYHYPFENKELFE 539 Query: 540 DQYPADMICEGIDQTRGWFYSLLAVSTLFKGKAPYKAVIAHGHIFDENGQKMSKSKGNVI 599 +Q+PAD+I EGIDQTRGWFYSLLAVS L+ GK PYK V++ GH+ DE GQKMSKSKGN + Sbjct: 540 EQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNAL 599 Query: 600 DPWEIMNEYGTDAFRWAILSDSAPWNNKRFSRGLVGETKSKIVDTLVNTHAFLTLYAGID 659 DP +++ ++G DA RWA+L DSA WN KRFS V E KSK VDTLVN ++F LYA +D Sbjct: 600 DPVDLVGKFGADALRWALLVDSALWNAKRFSERTVLEAKSKFVDTLVNVYSFYVLYANLD 659 Query: 660 GYDPADHPFKVSGHKLDRWILSRLNSLILLVDKGLAVNDFVNTSKAVENFVDELSNWYIR 719 Y+P + + V KLD W+LSRL+S V L F N ++ + VDE+SNWY+R Sbjct: 660 EYNP-NETYDVKRTKLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVR 718 Query: 720 RSRDRFWGSGLGEEKLDAYRXXXXXXXXXXXXMAPFTPMLSEDIFMNLGGGESVHLADYP 779 RSR+RFW SG+ EK AY +APFTP ++ED+ +NL G SVHL DYP Sbjct: 719 RSRNRFWESGMNAEKAAAYETLHDVLVTISKLIAPFTPFVAEDVHLNLTGS-SVHLEDYP 777 Query: 780 VADESLIDLELEQDMESARQIVELARNVRNETGIKNRQPLSELIV--SIDRSFHLADYEE 837 V +ESL+ +LE +M++ Q+VEL R+ RN+ +K +QPL+EL++ + Y + Sbjct: 778 VVNESLLQPKLEAEMDAVLQVVELGRSNRNQHSLKVKQPLAELVLLEHNENDMDWESYRD 837 Query: 838 IIKDEINVKEIVVEHSDSGFVDFTLKLNLKVAGKKYGKNVGFLQGFLKALDSEATRKAVQ 897 I+ DE+NVK VE ++ + + LKLN K AG K+GKNV + G+LK L + + V Sbjct: 838 IVMDELNVKAFHVELDETKYTSYQLKLNFKKAGPKFGKNVNAVNGWLKQLSQDEVQNFVS 897 Query: 898 -EGVIAIVSPEGEELQITAEELLVEKQAKPGFASASGYGLTVALNTEITPELEQEGWVRE 956 E + V+P GEE+ +T E++LVEK AK GF++ + TV L+T +T EL QEG RE Sbjct: 898 TERAVYEVAP-GEEIVVTTEDVLVEKVAKSGFSNTTNGQYTVMLDTNVTEELLQEGVARE 956 Query: 957 IVRAVQDYRKRLDLPIEKRIALTLKVDGELKAAVTAFEHVLRENVLVTTVDF 1008 +RAVQ+YRK+L+LP+ R+ + L + EL+ +T + +L EN+LV F Sbjct: 957 FIRAVQEYRKQLNLPVNLRVDVILDTEEELQQTLTNHKELLEENLLVKQFTF 1008 >ref|NP_691283.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] dbj|BAC12318.1| isoleucyl tRNA synthetase [Oceanobacillus iheyensis HTE831] Length = 1022 Score = 1169 bits (3023), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/1022 (52%), Positives = 739/1022 (72%), Gaps = 10/1022 (0%) Query: 11 RARDVRILKKWSDENTFRRSMENREGRPNYVFYEGPPTANGVPHIGHVLGRVIKDFIGRY 70 R R +R W + TF+RS+ENREG+ YVFYEGPPTANG+PH GH LGR IKDF+ RY Sbjct: 6 RERSMR--AHWKENRTFQRSIENREGQQTYVFYEGPPTANGMPHAGHALGRTIKDFVARY 63 Query: 71 QTMKGYRVVRKAGWDTHGLPVELGVQKKLGISGKQEIEEYGVEKFIKECKESVFGYEKQW 130 +TM GY+V+RKAGWDTHGLPVEL V+K+L I GK +IE++GVE+FI++CKESVF YE +W Sbjct: 64 KTMSGYQVLRKAGWDTHGLPVELEVEKQLNIRGKDDIEKFGVERFIEKCKESVFVYENEW 123 Query: 131 REFTEAIGYWTDLDHPYVTLDNTYIESVWNILATVHEKGLLYRGHRVSPYCPSCQTTLSS 190 +EFT+ +GYW D++ PY TL+N YIESVWNILAT+H++ LLY+GHRV PYCP+C+T+LSS Sbjct: 124 KEFTDKLGYWVDMEDPYKTLNNPYIESVWNILATIHDEDLLYKGHRVVPYCPNCETSLSS 183 Query: 191 HEVAQGYKTVKDLSATAKFKL-NGSGDYVLAWTTTPWTLPAHMALAMNPDMEYVRARQED 249 HEVAQGYK V DLS TAKF++ N +Y+L WTTTPWTLP ++ALA+NP+M YV+A+Q + Sbjct: 184 HEVAQGYKDVTDLSVTAKFRIKNKENEYILGWTTTPWTLPGNVALAVNPEMTYVKAKQGE 243 Query: 250 GVYVLAKNLAEEVLKGEYTILSTHKGTDFIGQSYTPPFGYIQAEKHNVIVGASFVTDSSG 309 +YV+AK+LA VL Y ++ G D +G +Y PF +I + + ++GA FVTD+SG Sbjct: 244 EIYVVAKSLANTVLGEAYEVVEEVSGEDLVGINYEAPFDFISLDNGHYVIGADFVTDTSG 303 Query: 310 TGIVHMAPAHGEDDYKSCRENGISFVNVVDTSGKYTDVVSDFAGRFVKDCDLDIVKVLSE 369 TGIVH+ PAHGEDDY + + G+ FVNVVD+ G+Y DV++ AG+FVKD D+DI+K+L++ Sbjct: 304 TGIVHLNPAHGEDDYNAIQAKGMDFVNVVDSKGRYEDVIAPLAGQFVKDSDVDIIKMLAK 363 Query: 370 KGLLYSKEKYEHSYPFCWRCDTPLLYYATDSWFIQTTAIKDQLIANNNSVDWYPDHVREG 429 G LY K+KYEHSYP CWRCDTPLLYYA + WFI+TTA+K+++ NN SV+W+P+H+R+G Sbjct: 364 DGTLYEKQKYEHSYPHCWRCDTPLLYYAMEGWFIKTTAVKERMQENNQSVEWFPNHMRDG 423 Query: 430 RFGKFLEELVDWNISRNRYWGTPLNIWICQDTGKEFAPHSIAELRSMAIGEVPEDIELHK 489 RFG FL+ +VDWNI RNRYWGTPLN+W+C D K+ +PHSI ELR+ A +VPEDIELHK Sbjct: 424 RFGNFLDNMVDWNIGRNRYWGTPLNVWVCDDCDKQKSPHSIQELRAFADSDVPEDIELHK 483 Query: 490 PYVDNIKLRSPFSEGGVMVRTSEVIDVWFDSGSMPFAQSHYPFENQDKFEDQYPADMICE 549 PYVD I GG M RT EVIDVWFDSGSMPFAQ H+PFEN + F Q+PAD++ E Sbjct: 484 PYVDKITFDCEC--GGKMHRTKEVIDVWFDSGSMPFAQYHHPFENDELFNKQFPADVVIE 541 Query: 550 GIDQTRGWFYSLLAVSTLFKGKAPYKAVIAHGHIFDENGQKMSKSKGNVIDPWEIMNEYG 609 G+DQTRGWFYSLLAVSTLF GK PYK V++ GHI DE+G+KMSKSKGN + P E++ E+G Sbjct: 542 GVDQTRGWFYSLLAVSTLFTGKTPYKRVLSLGHILDEHGRKMSKSKGNALSPVELIEEFG 601 Query: 610 TDAFRWAILSDSAPWNNKRFSRGLVGETKSKIVDTLVNTHAFLTLYAGIDGYDPADHPFK 669 DA RWA+L+DS+PWNNKRFS+ V + KSK++DT++N ++F ++YA ID ++ A+H Sbjct: 602 ADALRWALLADSSPWNNKRFSKKTVSQAKSKVIDTILNVYSFYSMYADIDKFNVAEHATD 661 Query: 670 VSGHKLDRWILSRLNSLILLVDKGLAVNDFVNTSKAVENFVDELSNWYIRRSRDRFWGSG 729 LD WILSRLNS+I V L D ++++ FVDELSNWY+RRSR RFW SG Sbjct: 662 AKT-TLDSWILSRLNSVIKEVTTSLDQYDITKGARSIALFVDELSNWYVRRSRQRFWSSG 720 Query: 730 LGEEKLDAYRXXXXXXXXXXXXMAPFTPMLSEDIFMNLGGGESVHLADYPVADESLIDLE 789 + E+K A+ MAP+ P +++DI+ NL G+SVH++D+P DE+ ID + Sbjct: 721 MNEDKKAAFTTLHEVLSKLTQLMAPYIPFVADDIYTNL-QGDSVHVSDFPKVDEAAIDEK 779 Query: 790 LEQDMESARQIVELARNVRNETGIKNRQPLSEL-IVSIDRSFH--LADYEEIIKDEINVK 846 LE DM+ +++E AR++RNE IK +QPL+EL +V D L Y II++EINVK Sbjct: 780 LEADMQGVLEVIEGARSLRNEVNIKTKQPLAELVVVPNDEQLQSGLQAYTSIIEEEINVK 839 Query: 847 EIVVEHSDSGFVDFTLKLNLKVAGKKYGKNVGFLQGFLKALDSEATRKAVQEGVIAIVSP 906 ++ + + F+D +KLN VAG K GK VG +G ++ + + G I + Sbjct: 840 QVSFKKDTADFLDTEMKLNFPVAGPKLGKQVGQAKGKVENFTEQEKEAFLVNGTINVELQ 899 Query: 907 EGEELQITAEELLVEKQAKPGFASASGYGLTVALNTEITPELEQEGWVREIVRAVQDYRK 966 +G E+ + E+++VEK+ + G+ G + L+T +T +L++EG+VRE +RAVQ YRK Sbjct: 900 DGSEVTLEKEDIIVEKKGQEGYQLFEGNRFVLLLDTNLTEKLKEEGFVREFIRAVQTYRK 959 Query: 967 RLDLPIEKRIALTLKVDGELKAAVTAFEHVLRENVLVTTVDFDGEHAFETVEAGGKSIGI 1026 LDLP+E+R+ + + D + ++ F+ ++ + +++ +V F + + V +G+ Sbjct: 960 ELDLPVEQRVDIYVNSDENAERILSEFDALIHDGLIINSVQFAEKEDMKQVTVNDTEMGL 1019 Query: 1027 HI 1028 I Sbjct: 1020 SI 1021 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.136 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,582,509,673 Number of extensions: 69464929 Number of successful extensions: 189663 Number of sequences better than 1.0e-05: 2812 Number of HSP's gapped: 182458 Number of HSP's successfully gapped: 3243 Length of query: 1030 Length of database: 757,237,578 Length adjustment: 136 Effective length of query: 894 Effective length of database: 387,984,114 Effective search space: 346857797916 Effective search space used: 346857797916 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)