BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0263.0012.p (1166 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00158712.1| hypothetical protein Avar452901 [Anabaena var... 725 0.0 ref|NP_961164.1| hypothetical protein MAP2230c [Mycobacterium av... 399 e-109 dbj|BAB69698.1| iturin A synthetase A [Bacillus subtilis] 398 e-109 emb|CAE11250.1| BmyA protein [Bacillus amyloliquefaciens] 397 e-109 ref|ZP_00074380.1| COG3321: Polyketide synthase modules and rela... 391 e-107 >ref|ZP_00158712.1| hypothetical protein Avar452901 [Anabaena variabilis ATCC 29413] Length = 994 Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/831 (47%), Positives = 527/831 (63%), Gaps = 25/831 (3%) Query: 339 QDIAIIGMGLRIPGANSLEEYWELLYSGRSAIREVDPGRWSDDKHVNEDAGVFHTSYTGK 398 QDIAIIGM +IPGA++LE+YW+LL +GRS I++V RW + + + + Sbjct: 39 QDIAIIGMACKIPGADNLEQYWDLLNAGRSVIQDVPQDRWFNQHYFEAKGNSPQAKISKR 98 Query: 399 GGFIDAPYDFDPLFFGMSPKEAESADPQQRIFLQICWEALQQAGYGGKYRTRKIGVFAGC 458 G F+++P+DFDP+FFG+SPKEA + DPQQR+FL++ +ALQQAGYGGKYR IGVF GC Sbjct: 99 GCFVNSPFDFDPMFFGISPKEATAMDPQQRLFLELSMQALQQAGYGGKYRPDNIGVFVGC 158 Query: 459 EQNTYMEHFANYRSYMLIKERLLDSPAFLGMLPAE-RQEILARISGVLEPARLVADVVAG 517 QNTY+EHF NY+ Y +++RL +S ++ LPAE RQ +L +S VL+P+ ++ + AG Sbjct: 159 GQNTYIEHFTNYQYYEELRQRLQES-SWFDHLPAEDRQHLLKTLSQVLQPSEILPESAAG 217 Query: 518 NGLNEVAARVSHCLNLSGPSLIVNSACSSSLVAIHMACESLRTGQSEMALAGGVNLNLSP 577 N +NE+AARVSHCLNL GPS+ V++ACSSSLVA+H+ACESLR+GQ+ MA+ GGVNLNLSP Sbjct: 218 NEVNELAARVSHCLNLKGPSMAVSTACSSSLVALHIACESLRSGQTGMAIVGGVNLNLSP 277 Query: 578 TPFVSLSRVTALSPTGECYPFDQRANGMVLGEGAGAVLLKPLHAALRDGDHIHAVIKGSA 637 +PF L + ALS +G CYPFD+RANG+VLGEGAG +++KPL AL DGD IHAVIKGSA Sbjct: 278 SPFTFLRKAQALSLSGTCYPFDRRANGIVLGEGAGVLIIKPLKQALADGDLIHAVIKGSA 337 Query: 638 VNNDGRSQGITAPRPQGQAEVIREAFVRTGIHPETVSYIETHGTATPLGDPIEIEGMTRA 697 VNNDG SQGITAP P+GQAE IR+A+ G+ P T+SYIETHGT T LGDP+E+EGMT+A Sbjct: 338 VNNDGHSQGITAPNPKGQAEAIRQAYNSCGVDPRTISYIETHGTGTLLGDPVEVEGMTKA 397 Query: 698 FSSFTDKKQFCGIGSVKSSVGHMLSAAGVTSLIKVVLSLKHQILPHTVNYEQPNPNIDFE 757 F SFTD+K FC IGSVKSS+GH+LSA+G+ SLIKVVL+++H +P TV +E+PNP+I+F Sbjct: 398 FRSFTDEKGFCTIGSVKSSIGHLLSASGIVSLIKVVLAMQHGKIPQTVGFEEPNPHINFA 457 Query: 758 HSPFYVVDKHPRRWEAAGDAPLRASVNAFGFGGTNAHVILEQAPPEMVVVPDXXXXXXXX 817 +PF V K W G+ PLRA VN FGFGGTN HVILE++P + Sbjct: 458 DTPFTVAGKS-IPWSPNGN-PLRAGVNGFGFGGTNCHVILEESPVAANLQSQVTSSAPDL 515 Query: 818 XXXXXXXXXXXXQVAGRLRAYLADNQELSAAAVCRAMNRSQKELPVKAAAVVTSREHLAG 877 +VA +LR ++ + E ++ +C N +QKELP KAA VV R+HL Sbjct: 516 LCLTARNQQALQEVARQLRQHIIHHPEQESSQICFTQNNAQKELPYKAALVVNDRQHLLN 575 Query: 878 ILSAVADGGSLPEILRGRANPNRTTPVQWVLDGGKALSGQELDAVSARFPGFGLAYREVM 937 L A+ + +I GRANP RTTP +LDG A++ E++ + RFP F +AY V Sbjct: 576 YLEAICSAQTPADIYTGRANPQRTTPFHLILDGTSAIAPAEIETLGQRFPQFQVAYNSVR 635 Query: 938 EAAGGASGQIECLASQFALGKLLLDAGLRPSAILAEGAGIPAALMLTGRITLRQAV-LFI 996 S Q A Q+A G+LL+ L+P+++L E GI A L G +TL QA+ L + Sbjct: 636 AGFHEMSEQAHIFAVQYAWGRLLMSLELQPTSLLVEKTGILAGATLRGMLTLEQAIALLL 695 Query: 997 Q-DGRE--PAGDSSPLPE--GLVKCAVVIPSGTV---DQPFMDGLWP--QIAESM---VN 1043 Q +G + D S + C +V G D D L Q++E + V Sbjct: 696 QIEGEKGLSVHDVSAKEQSASTWTCPLVTSQGIFSHADTISTDQLLALVQVSEQLNVDVC 755 Query: 1044 SLELTDYEHSLEAGDTLLYCGSQHRRNSLPLEGIRGVHTLCLPLEHDPVEHLLRAMAELY 1103 ++ L GD+ + + SL G+ + L VE +L ++A Y Sbjct: 756 QDVISKESVYLHLGDSF---ALKEQLASLDELGV----WIYLNKRQPVVERVLTSLARSY 808 Query: 1104 VLGVPFDPAGLSVPCGRTLPLPTYPFEYAAYKASYEDEILQPQASGTPYAD 1154 V G+ F+ L R + LPTYPFE Y+ S D + QA+ P A+ Sbjct: 809 VAGIRFNSIPLFPQGLRRVLLPTYPFERKTYRVSLVDHTQENQATSIPAAE 859 >ref|NP_961164.1| hypothetical protein MAP2230c [Mycobacterium avium subsp. paratuberculosis str. k10] gb|AAS04547.1| hypothetical protein MAP2230c [Mycobacterium avium subsp. paratuberculosis str. k10] Length = 3679 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 337/1090 (30%), Positives = 497/1090 (45%), Gaps = 123/1090 (11%) Query: 1 VITGRK-PVPANPELLLEL-EKLGAQVMYAAVDVTSRAQMEELLARIHDVYGPLHGVIHA 58 V+TGR+ P A + L ++ G +V A DV + LL + P+ G++HA Sbjct: 1210 VLTGRRAPGEAAQRRIDALSQQHGCEVRVIAADVADAHHVARLLGAVRAELPPVAGIVHA 1269 Query: 59 AGQMEYAPHKLLTRSQDEIEQVLAPKWQGTIIADLVTRQEPLRFFAALSSVSASRKAWAS 118 AG++ P L + EI++V A K G L FF + SS+++ W Sbjct: 1270 AGEIGTTPLSDLEDA--EIDRVFAGKVWGAWHLSEAAADLRLDFFVSTSSIAS---VWG- 1323 Query: 119 GLGD--YAAANAFLNG--YCIYRAGDNAPGRSLSINYSLWKDTGAGTDFGRLVELALKG- 173 GLG Y AANAFL+G + + G N +S+N+ W G + R LA +G Sbjct: 1324 GLGQTAYGAANAFLDGLAWRLREQGVNG----ISVNFGPWA-AGMADENAR-ARLAQRGI 1377 Query: 174 QGLQPLAHEAAAAVFLRALSSPGS----DIVHVLDLVEPKAHKEAFA-----LPPSRQEP 224 + L P A A + ++ G D L L + + A +P P Sbjct: 1378 KTLSPADALAGLADVMATAAAQGVVARIDWTRFLPLYQQAGQRSLLAELAREVPDFAPAP 1437 Query: 225 ARLAEQKFIHRSA--------REIRDIVYQAIGEELRISVRHLETGMNFTELGLDSVGAT 276 + + R A + + + + A+ E R+ + F +LG+DS+ A Sbjct: 1438 TPSGKTGLVERLAGAPVQQRRKLMTEFLRNAVAEVTRVDAAEIREDAGFFDLGMDSLMAI 1497 Query: 277 RVVADIGGKLGTELYPTLIFEYQTPEALASHIAEQLTEDSXXXXXX-XXXXXXXXXXXXX 335 + I +G ++ TL +Y S +AE L D Sbjct: 1498 ELRRHIEQGVGKQIPATLAMDYPR----LSDVAEYLLGDVLDLRGQPDAKPAPPAGTPAP 1553 Query: 336 XXRQD--IAIIGMGLRIPGANSLEEYWELLYSGRSAIREVDPGRWSDDKHVNEDAGVFHT 393 R D IAI+ M R PGA E +WELL G AIREV R+ D+ + D Sbjct: 1554 AGRTDEPIAIVSMACRFPGAADPEAFWELLSGGVDAIREVPEDRFDIDEFYDPDPETPGK 1613 Query: 394 SYTGKGGFIDAPYDFDPLFFGMSPKEAESADPQQRIFLQICWEALQQAGYG-GKYRTRKI 452 Y+ GG++D +F+P FFG+SP+EA DPQQR+ L+ WE L++AGY R + Sbjct: 1614 MYSRFGGYLDQIDEFEPEFFGISPREAVWIDPQQRLALETVWEGLERAGYSPAALRGSRS 1673 Query: 453 GVFAGCEQNTYMEHFANYRSYMLIKERLLDSPAFLGMLPAERQEILARISGVLEPARLVA 512 G+F G N Y S++L E + +EP Sbjct: 1674 GIFVGVGANEY--------SHLLSAESV----------------------DKIEP----- 1698 Query: 513 DVVAGNGLNEVAARVSHCLNLSGPSLIVNSACSSSLVAIHMACESLRTGQSEMALAGGVN 572 + GN LN ++ RV+ L L GP++ V++ACSSSLVA+H AC++L +G ++ALAGGVN Sbjct: 1699 HFITGNALNAISGRVAFALGLEGPAVAVDTACSSSLVAVHQACQALHSGDCDLALAGGVN 1758 Query: 573 LNLSPTPFVSLSRVTALSPTGECYPFDQRANGMVLGEGAGAVLLKPLHAALRDGDHIHAV 632 + LSP ++ SR LSP G C FD A+G V EG G ++LK + A+RDGD + AV Sbjct: 1759 VLLSPVSNIAASRARMLSPVGRCKTFDATADGYVRSEGCGILVLKRMSDAVRDGDRVCAV 1818 Query: 633 IKGSAVNNDGRSQGITAPRPQGQAEVIREAFVRTGIHPETVSYIETHGTATPLGDPIEIE 692 I SAVN DG S G+T P Q +I A R G+ + V Y+E HGT T LGDPIE++ Sbjct: 1819 IPASAVNQDGASSGLTVPNGGAQQRLIATALSRAGLSGDDVDYLEAHGTGTALGDPIEVQ 1878 Query: 693 GMTRAFSSFTDKKQFCGIGSVKSSVGHMLSAAGVTSLIKVVLSLKHQILPHTVNYEQPNP 752 + + D + IGSVK+++GH+ +A+GV LIKVVLSL+H++LP ++++E P+P Sbjct: 1879 AAGAVYGATRDTDRPLLIGSVKTNIGHLEAASGVAGLIKVVLSLQHEMLPQSLHFETPSP 1938 Query: 753 NIDFEHSPFYVVDKHPRRWEAAGDAPLRASVNAFGFGGTNAHVILEQAPPEMVV-----V 807 +I ++ P VVDK W+ G P RA V++FGF GTNAHV++E+AP + Sbjct: 1939 HIPWDSLPLRVVDK-AVPWQTNGR-PRRAGVSSFGFTGTNAHVLIEEAPQPVTTQHATPA 1996 Query: 808 PDXXXXXXXXXXXXXXXXXXXXQVAGRLRAYLADNQELSAAAVCRAMNRSQKELPVKAAA 867 + +A R +L + + +C + + +AA Sbjct: 1997 AESDARPVDVLPLSARSPEALLALAQRYGEWLHAHPDADIGDLCFTVGAGRAHFEHRAAL 2056 Query: 868 VVTSREHLAGILSAVADGGSLPEILRGRANPNRTTPVQWVLDG-GKALSGQELDAVSARF 926 VV S L+ +AD + P + RG TT W+ G G G + A Sbjct: 2057 VVDSVRSAREALADLADNRTRPGVARGECTDPPTT--AWLFTGQGSQYPGMARELFDAE- 2113 Query: 927 PGF------------GLAYREVMEA-------AGGASG---------QIECLASQFALGK 958 P F GL R + E GG +G Q A + L + Sbjct: 2114 PVFAETVTRCADAVDGLLPRPLTEVIFATDKDTGGEAGKTLRNTAFAQPALFAVEMGLAR 2173 Query: 959 LLLDAGLRPSAILAEGAGIPAALMLTGRITLRQ-AVLFIQDGREPAGDSSPLPEGLVKCA 1017 L G+ P +L G AA + G +L A L + GR G LP+G A Sbjct: 2174 LWQSWGVEPDVVLGHSVGQYAAACVAGVFSLEDGARLMAERGRLFGG----LPDGGRMVA 2229 Query: 1018 VVIPSGTVDQ 1027 V + V++ Sbjct: 2230 VFADAQYVEE 2239 Score = 338 bits (867), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 202/563 (35%), Positives = 288/563 (51%), Gaps = 46/563 (8%) Query: 341 IAIIGMGLRIPGANSLEEYWELLYSGRSAIREVDPGRWSDDKHVNEDAGVFHTSYTGKGG 400 AI+G R P A +E+W +L GR A+ EV RW D+ + D T + G Sbjct: 14 FAIVGYAARFPDAADADEFWRVLAEGRDAVSEVPKDRWDADEFFDPDPDAPGKVVTRRAG 73 Query: 401 FIDAPYDFDPLFFGMSPKEAESADPQQRIFLQICWEALQQAGYG-GKYRTRKIGVFAGCE 459 F+D FD FFGMS +EA DPQ R+ L+ W A++ G GVF G Sbjct: 74 FVDDVTGFDAPFFGMSAREARLLDPQHRLLLETAWRAVEHCGTAPTDLANTNTGVFIGIS 133 Query: 460 QNTYMEHFANYRSYMLIKERLLDSPAFLGMLPAERQEILARISGVLEPARLVADVVAGNG 519 + Y+ ++ +Y I+ A G Sbjct: 134 THDYLGMASDELTYDQIE----------------------------------AYTAIGTS 159 Query: 520 LNEVAARVSHCLNLSGPSLIVNSACSSSLVAIHMACESLRTGQSEMALAGGVNLNLSPTP 579 A R+S+ L L GP++ V++ACSSSLVAIH AC++LR G+ ++ALAGG N+ L+P Sbjct: 160 SAAAAGRISYRLGLQGPAVAVDTACSSSLVAIHQACQALRLGECDLALAGGANVLLTPAT 219 Query: 580 FVSLSRVTALSPTGECYPFDQRANGMVLGEGAGAVLLKPLHAALRDGDHIHAVIKGSAVN 639 ++ S+ L+P G C FD A+G V GEG G +++K L A+RDGD I AVI+GSA+N Sbjct: 220 MITFSQAHMLAPDGRCKTFDAAADGYVRGEGCGVLVVKRLEDAIRDGDRIRAVIRGSAIN 279 Query: 640 NDGRSQGITAPRPQGQAEVIREAFVRTGIHPETVSYIETHGTATPLGDPIEIEGMTRAFS 699 DG S G+T P Q VI EA R GI P V Y+E HGT T LGDPIE++ Sbjct: 280 QDGASGGLTVPNGVAQQRVIAEALQRAGIAPGDVDYLEAHGTGTSLGDPIEVQAAGAVLG 339 Query: 700 SFTDKKQFCGIGSVKSSVGHMLSAAGVTSLIKVVLSLKHQILPHTVNYEQPNPNIDFEHS 759 + + + IGSVK+++GH+ +AAG+ +IKV+L+L+H +LP +++ P+P+I ++ Sbjct: 340 AGREASRPLLIGSVKTNIGHLEAAAGIAGVIKVILALEHGMLPQHLHFRDPSPHIPWDRL 399 Query: 760 PFYVVDKHPRRWEAAGDAPLRASVNAFGFGGTNAHVILEQAP--------PEMVVVPDXX 811 VV K W+ G P A V++FGF GTNAHVILE+AP P V P Sbjct: 400 AVQVV-KEATAWQRNGR-PRVAGVSSFGFAGTNAHVILEEAPDGTGRAAVPPAAVRP-PG 456 Query: 812 XXXXXXXXXXXXXXXXXXQVAGRLRAYLADNQELSAAAVCRAMNRSQKELPVKAAAVVTS 871 Q+AG R +L+ + + + A +C + +AA VV S Sbjct: 457 QRRFHVLPLSARTPAALVQIAGEYRDWLSAHPDTALADLCLTAGAGRAHFEHRAALVVDS 516 Query: 872 REHLAGILSAVADGGSLPEILRG 894 +L+A+AD P +LRG Sbjct: 517 TGSAGELLAALADDRPAPGLLRG 539 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 92/318 (28%), Positives = 134/318 (42%), Gaps = 37/318 (11%) Query: 19 EKLGAQVMYAAVDVTSRAQMEELLARIHDVYGPLHGVIHAAGQMEYAPHKLLTRSQDEIE 78 E+ +V A DV AQ+E+LLARI PL GV H AG ++ A L +S + Sbjct: 3342 ERYRCRVHTFAADVGDAAQVEQLLARIRAELPPLAGVAHLAGVLDDA--LLSQQSPERFR 3399 Query: 79 QVLAPKWQGTIIADLVTRQEPLRFFAALSSVSASRKAWASGLGDYAAANAFLNGYCIYRA 138 LAPK G D TR + L FF + S S S + G +Y+ ANA+L+G R Sbjct: 3400 VALAPKAFGASYLDHATRTDDLDFF--IVSSSVSSLLGSPGQANYSTANAWLDGLVAARQ 3457 Query: 139 GDNAPGRSLSINYSLWKDTGAGTDFGRLVELALKGQGLQPLAHEAAA------------- 185 P + +N W G + + QGL PL AA Sbjct: 3458 ARGLP--ATGVNLGPWAQGGMASS--EAARANIGAQGLIPLEPTAALAALAEVVANGTGQ 3513 Query: 186 -----AVFLRALSSPGSDIVHVLDLVEPKAHKEAFALPPSRQEPARLAEQKFIHRSAREI 240 A + RA G +LDLV P A EA E + ++ + + A I Sbjct: 3514 ATVIKANWQRAAKLLGDARPPILDLVLPSAVGEA----SGDSELLKQLQEIPVAQRAAFI 3569 Query: 241 RDIVYQAIGEELRISVRHLETGMNFTELGLDSVGA----TRVVADIGGKLGTELYPTLIF 296 + + + + LR++ T F +LG DS+ A R+ + GG + T +F Sbjct: 3570 TEFLQREVQGFLRLAQPPAATS-RFLDLGTDSLMAVELRNRLHSQFGGAF--TINATAVF 3626 Query: 297 EYQTPEALASHIAEQLTE 314 +Y T LA ++A QL + Sbjct: 3627 DYPTIGGLAEYLAGQLPD 3644 >dbj|BAB69698.1| iturin A synthetase A [Bacillus subtilis] Length = 3982 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 238/643 (37%), Positives = 346/643 (53%), Gaps = 54/643 (8%) Query: 264 NFTELGLDSVGATRVVADIGGKLGTELYPTLIFEYQTPEALASHIAEQLTEDSXXXXXXX 323 ++ ++G +S+ +++ I K G EL + +F Y + LA++++E E Sbjct: 604 SYFDMGANSLQLSQIAERIEQKFGRELAVSDLFTYPSITDLAAYLSESRAE--------- 654 Query: 324 XXXXXXXXXXXXXXRQDIAIIGMGLRIPGANSLEEYWELLYSGRSAIREVDPGRWSDD-K 382 +DIAIIGM L +PGA++ ++W LL G +IRE R D Sbjct: 655 -IKQDAAAKPSHVTPKDIAIIGMSLNVPGASTKSDFWNLLEKGEHSIREYPESRLKDAAD 713 Query: 383 HVNEDAGVFHTSYTGKGGFIDAPYDFDPLFFGMSPKEAESADPQQRIFLQICWEALQQAG 442 ++ F+ S KGG++D FD FFG++PK A+ DP QR+FLQ W A++ AG Sbjct: 714 YLKSIQSEFNESQFVKGGYLDEIDRFDYSFFGLAPKTAQFMDPNQRLFLQSAWHAIEDAG 773 Query: 443 Y-GGKYRTRKIGVFAGCEQNTYMEHFANYRSYMLIKERLLDSPAFLGMLPAERQEILARI 501 Y GG ++GV+AG + Y +Y ERLL + P E + Sbjct: 774 YAGGSMNGSRVGVYAGYSKVGY-----DY-------ERLLSAN-----YPEELHQ----- 811 Query: 502 SGVLEPARLVADVVAGNGLNEVAARVSHCLNLSGPSLIVNSACSSSLVAIHMACESLRTG 561 + GN + +A+R+++ LNL GP++ V++ACSSSL A+HMAC+SL +G Sbjct: 812 ------------YIVGNLPSVLASRIAYFLNLKGPAVTVDTACSSSLAAVHMACKSLMSG 859 Query: 562 QSEMALAGGVNLNLSPTPFVSLSRVTALSPTGECYPFDQRANGMVLGEGAGAVLLKPLHA 621 EMALAGG+ +L P + S G F + ++G GEGA AVLLKPL Sbjct: 860 DCEMALAGGIRTSLLPICI----GLDMESSDGYTKTFSKDSDGTGTGEGAAAVLLKPLQD 915 Query: 622 ALRDGDHIHAVIKGSAVNNDGRSQGITAPRPQGQAEVIREAFVRTGIHPETVSYIETHGT 681 A+RDGDHI+ VIKGSA+N DG + GITAP P Q EVI A+ GI PET+S+IE HGT Sbjct: 916 AVRDGDHIYGVIKGSAMNQDGTTAGITAPNPAAQTEVIETAWKDAGIAPETLSFIEAHGT 975 Query: 682 ATPLGDPIEIEGMTRAFSSFTDKKQFCGIGSVKSSVGHMLSAAGVTSLIKVVLSLKHQIL 741 T LGDP+E G+ +AF +T KKQFC IGSVKS++GH+ AAG+ LIK VL L H+ Sbjct: 976 GTKLGDPVEFNGLCKAFEKYTAKKQFCAIGSVKSNIGHLFEAAGIVGLIKSVLMLNHKKN 1035 Query: 742 PHTVNYEQPNPNIDFEHSPFYVVDKHPRRWEAAGDAPLRASVNAFGFGGTNAHVILEQAP 801 P ++ +PNP I F SPFYV + +GD PLR V++FGF GTNAHV+LE+ Sbjct: 1036 PPLAHFNEPNPLIHFHSSPFYVNQEAAEF--TSGDEPLRGGVSSFGFSGTNAHVVLEEYI 1093 Query: 802 PEMVVVPDXXXXXXXXXXXXXXXXXXXXQVAGRLRAYLADNQELSAAAVCRAMNRSQKEL 861 + P+ ++A + R Y++D+ + S ++C + + L Sbjct: 1094 SQSEYAPE-DEHGPHLFVLSAHTEKSLYELAQQYRQYVSDDSQASLKSICYTASTGRAHL 1152 Query: 862 PVKAAAVVTSREHLAGILSAVADGG-SLPEILRGRANPNRTTP 903 A +V+ ++ L+ L+ + G +LP + G N P Sbjct: 1153 DHGIAMIVSGKQELSDKLTRLIQGDRNLPGVYIGYKNMKEMLP 1195 >emb|CAE11250.1| BmyA protein [Bacillus amyloliquefaciens] Length = 3982 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 238/643 (37%), Positives = 346/643 (53%), Gaps = 54/643 (8%) Query: 264 NFTELGLDSVGATRVVADIGGKLGTELYPTLIFEYQTPEALASHIAEQLTEDSXXXXXXX 323 ++ ++G +S+ +++ I K G EL + +F Y + LA++++E E Sbjct: 604 SYFDMGANSLQLSQIAERIEQKFGCELAVSDLFTYPSITDLAAYLSESRAE--------- 654 Query: 324 XXXXXXXXXXXXXXRQDIAIIGMGLRIPGANSLEEYWELLYSGRSAIREVDPGRWSDD-K 382 +DIAIIGM L +PGA++ ++W LL G +IRE R D Sbjct: 655 -IKQDAAAKPSHVTPKDIAIIGMSLNVPGASTKSDFWNLLEKGEHSIREYPESRLKDAAD 713 Query: 383 HVNEDAGVFHTSYTGKGGFIDAPYDFDPLFFGMSPKEAESADPQQRIFLQICWEALQQAG 442 ++ F+ S KGG++D FD FFG++PK A+ DP QR+FLQ W A++ AG Sbjct: 714 YLKSIQSEFNESQFVKGGYLDEIDRFDYSFFGLAPKAAQFMDPNQRLFLQSAWHAIEDAG 773 Query: 443 Y-GGKYRTRKIGVFAGCEQNTYMEHFANYRSYMLIKERLLDSPAFLGMLPAERQEILARI 501 Y GG ++GV+AG + Y +Y ERLL + P E + Sbjct: 774 YAGGSMNGSRVGVYAGYSKVGY-----DY-------ERLLSAN-----YPEELHQ----- 811 Query: 502 SGVLEPARLVADVVAGNGLNEVAARVSHCLNLSGPSLIVNSACSSSLVAIHMACESLRTG 561 + GN + +A+R+++ LNL GP++ V++ACSSSL A+HMAC+SL +G Sbjct: 812 ------------YIVGNLPSVLASRIAYFLNLKGPAVTVDTACSSSLAAVHMACKSLISG 859 Query: 562 QSEMALAGGVNLNLSPTPFVSLSRVTALSPTGECYPFDQRANGMVLGEGAGAVLLKPLHA 621 EMALAGG+ +L P + S G F + ++G GEGA AVLLKPL Sbjct: 860 DCEMALAGGIRTSLLPICI----GLDMESSDGYTKTFSKDSDGTGTGEGAAAVLLKPLQD 915 Query: 622 ALRDGDHIHAVIKGSAVNNDGRSQGITAPRPQGQAEVIREAFVRTGIHPETVSYIETHGT 681 A+RDGDHI+ VIKGSA+N DG + GITAP P Q EVI A+ GI PET+S+IE HGT Sbjct: 916 AVRDGDHIYGVIKGSAMNQDGTTAGITAPNPAAQTEVIETAWKDAGIAPETLSFIEAHGT 975 Query: 682 ATPLGDPIEIEGMTRAFSSFTDKKQFCGIGSVKSSVGHMLSAAGVTSLIKVVLSLKHQIL 741 T LGDP+E G+ +AF +T KKQFC IGSVKS++GH+ AAG+ LIK VL L H+ Sbjct: 976 GTKLGDPVEFNGLCKAFEKYTAKKQFCAIGSVKSNIGHLFEAAGIVGLIKSVLMLNHKKN 1035 Query: 742 PHTVNYEQPNPNIDFEHSPFYVVDKHPRRWEAAGDAPLRASVNAFGFGGTNAHVILEQAP 801 P ++ +PNP I F SPFYV + +GD PLR V++FGF GTNAHV+LE+ Sbjct: 1036 PPLAHFNEPNPLIHFHSSPFYVNQEAAEF--TSGDEPLRGGVSSFGFSGTNAHVVLEEYI 1093 Query: 802 PEMVVVPDXXXXXXXXXXXXXXXXXXXXQVAGRLRAYLADNQELSAAAVCRAMNRSQKEL 861 + P+ ++A + R Y++D+ + S ++C + + L Sbjct: 1094 SQSEYAPE-DEHGPHLFVLSAHTEKSLYELAQQYRQYVSDDSQASLKSICYTASTGRAHL 1152 Query: 862 PVKAAAVVTSREHLAGILSAVADGG-SLPEILRGRANPNRTTP 903 A +V+ ++ L+ L+ + G +LP + G N P Sbjct: 1153 DHGIAMIVSGKQELSDKLTRLIQGDRNLPGVYIGYKNMKEMLP 1195 >ref|ZP_00074380.1| COG3321: Polyketide synthase modules and related proteins [Trichodesmium erythraeum IMS101] Length = 1909 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 247/683 (36%), Positives = 351/683 (51%), Gaps = 63/683 (9%) Query: 340 DIAIIGMGLRIPGANSLEEYWELLYSGRSAIREVDPGRWSDDKHVNEDAGVFHTSYTGKG 399 +IAIIGM R PGA ++E++W+ L +G +I + + S E + +Y Sbjct: 14 EIAIIGMSGRFPGAKNVEDFWDNLKNGVESISLLSDKQLSKSGVAPEILN--NPNYVKVN 71 Query: 400 GFIDAPYDFDPLFFGMSPKEAESADPQQRIFLQICWEALQQAGYGGKYRTRKIGVFAGCE 459 + FD FF SP+EAE DPQQR+FL+ WEA++ +GY + IGV+AG Sbjct: 72 SMVSDIDMFDANFFNYSPREAEEIDPQQRLFLECAWEAIESSGYNPENYEGSIGVYAGGG 131 Query: 460 QNTYMEHFANYRSYMLIKERLLDSPAFLGMLPAERQEILARISGVLEPARLVADVVAGNG 519 TY+ + + ++L+ R + GN Sbjct: 132 LPTYLMYNLEDQDFILLGNRYFTQ-------------------------------MVGND 160 Query: 520 LNEVAARVSHCLNLSGPSLIVNSACSSSLVAIHMACESLRTGQSEMALAGGVNLNLSPTP 579 + +A R ++ LNL+GP+L + +ACS+SLVA+H+AC+SL G+ +MALAGGV++ + P Sbjct: 161 KDYLATRTAYKLNLTGPALNIQTACSTSLVAVHLACQSLLNGECDMALAGGVSIQI-PQN 219 Query: 580 FVSLSRVTAL-SPTGECYPFDQRANGMVLGEGAGAVLLKPLHAALRDGDHIHAVIKGSAV 638 L + + S G C FD R++G V G G G VLLKPL A+ DGD IHAVIKGSA+ Sbjct: 220 VGYLHQEGLIGSHDGHCRAFDARSSGTVFGNGVGVVLLKPLQDAIADGDCIHAVIKGSAI 279 Query: 639 NNDGRSQ-GITAPRPQGQAEVIREAFVRTGIHPETVSYIETHGTATPLGDPIEIEGMTRA 697 NNDG + G TAP GQA VI EA + PET++YIE HGT T LGDPIEIE +T+A Sbjct: 280 NNDGSLKLGYTAPSVDGQAAVISEAQAVASVTPETITYIEAHGTGTELGDPIEIEALTKA 339 Query: 698 FSSFTDKKQFCGIGSVKSSVGHMLSAAGVTSLIKVVLSLKHQILPHTVNYEQPNPNIDFE 757 FS TDKKQFC IGS+K++VGHM +AAG+ +LIK VL+LKH ++P +++YE+PNP I+F Sbjct: 340 FSEHTDKKQFCAIGSLKTNVGHMNTAAGIGALIKTVLTLKHNLIPPSLHYEKPNPQINFS 399 Query: 758 HSPFYVVDKHPRRWEAAGDAPLRASVNAFGFGGTNAHVILEQAPPEMVVVPDXXXXXXXX 817 SPFY V+ W+ G PLRA V++FG GGTN+HV+LE+AP + V D Sbjct: 400 DSPFY-VNSTLSEWKRNG-TPLRAGVSSFGIGGTNSHVVLEEAPSQ-VKEEDDLQRPVHI 456 Query: 818 XXXXXXXXXXXXQVAGRLRAYLADNQELSAAAVCRAMNRSQKELPVKAAAVVTSREHLAG 877 + YL N +L VC N + + A V + L Sbjct: 457 LTLSAKTPTALADLVDSYHHYLETNLDLDLGDVCYTANTGRVHFNHRLAVVAEKQTELTE 516 Query: 878 ILSAVADGGSLPEILRGRANPNRTTP-VQWVLDG--------GKALSGQ------ELDAV 922 L + I G+ N T P V ++ G GK L Q LD Sbjct: 517 KLRQFKLEDKVEGICSGKLLINATAPKVAFLFTGQGSQYVNMGKELYEQAPVFRAALDEC 576 Query: 923 SARFPGFGL-AYREVMEAAGGASGQIE--------CLASQFALGKLLLDAGLRPSAILAE 973 G+ + E++ GG + ++ A ++AL KL G++P ++ Sbjct: 577 EEILEELGVNSILEIIYPEGGETSPLDQTAYTQPAIFAIEYALAKLWESWGIKPDVVMGH 636 Query: 974 GAGIPAALMLTGRITLRQAVLFI 996 G A + G +L + I Sbjct: 637 SVGEYIAATVAGIFSLEDGLKLI 659 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 98/335 (29%), Positives = 142/335 (42%), Gaps = 37/335 (11%) Query: 2 ITGRK-PVPANPELLLELEKLGAQVMYAAVDVTSRAQMEELLARIHDVYGPLHGVIHAAG 60 + GR P E + ELE G QV DV+ M + +I PL GVIHAAG Sbjct: 1535 LVGRNSPSETAQESIQELEAAGTQVSVFLGDVSVEKDMVNIFQKIQTSLPPLKGVIHAAG 1594 Query: 61 QMEYAPHKLLTRSQDEIEQVLAPKWQGTIIADLVTRQEPLRFFAALSSVSASRKAWASGL 120 ++ + +T Q +V APK GT +T+ PL FF SS+++ + G Sbjct: 1595 VLDDGFIQQMTWQQ--FTKVTAPKVTGTWNLHKLTKDIPLDFFVCFSSLASVLG--SPGQ 1650 Query: 121 GDYAAANAFLNGYCIYRAGDNAPGRSLSINYSLWKDTGAGTDFGRLVELALKGQGLQPLA 180 +YAAANAF++ YR PG LSIN+ W + G G + L+ QGLQ + Sbjct: 1651 SNYAAANAFMDAVAQYRQNLGLPG--LSINWGPWANVGIAARMGAQQQGRLQSQGLQGIQ 1708 Query: 181 HEAAAAVFLRALSSPGSDIVHVLDLVEPKAHKE------AFALPPSRQEPAR-------- 226 E L++ + I + ++ P + AF + Q P + Sbjct: 1709 TEQGLQALEEVLATDEAQIA-IFNIDWPHLLSQFGQMTPAFLSEIASQHPLQGKANQGPK 1767 Query: 227 ---LAEQKFIHRSAREIRDIVYQAIGEELRISVRHLETGMN--------FTELGLDSVGA 275 L EQ + + + R +V IG + + L G N F LG+DS+ A Sbjct: 1768 QRELLEQMKVATTDQRQRLMVDYLIG----VVAKVLRRGKNDLPDPEEGFFNLGMDSLMA 1823 Query: 276 TRVVADIGGKLGTELYPTLIFEYQTPEALASHIAE 310 I LG L T FEY +ALA ++ E Sbjct: 1824 LDFGQMIQVDLGITLSSTSTFEYPNIQALAEYLEE 1858 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.135 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,712,036,194 Number of extensions: 73701474 Number of successful extensions: 172144 Number of sequences better than 1.0e-05: 2146 Number of HSP's gapped: 165003 Number of HSP's successfully gapped: 3587 Length of query: 1166 Length of database: 757,237,578 Length adjustment: 137 Effective length of query: 1029 Effective length of database: 385,269,015 Effective search space: 396441816435 Effective search space used: 396441816435 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)