BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0256.0030.p (362 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00062049.1| COG0547: Anthranilate phosphoribosyltransfera... 328 2e-88 gb|EAD41066.1| unknown [environmental sequence] 317 2e-85 ref|NP_247205.1| anthranilate synthase component II (trpD) [Meth... 310 4e-83 ref|ZP_00079752.1| COG0547: Anthranilate phosphoribosyltransfera... 300 4e-80 ref|ZP_00043306.1| COG0547: Anthranilate phosphoribosyltransfera... 296 5e-79 >ref|ZP_00062049.1| COG0547: Anthranilate phosphoribosyltransferase [Clostridium thermocellum ATCC 27405] Length = 345 Score = 328 bits (840), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 155/336 (46%), Positives = 227/336 (67%) Query: 23 IQSGIASIIEGRDLSRLQAREIMGSIMEGSASAAQIGSLLTALRIKGETVEEITGFAEAM 82 ++ I+ ++EG++LS + E + IMEG A+ AQIGS +TALRIKGET+EEITG A+ M Sbjct: 2 LKKAISKLVEGKNLSESEIIEALDCIMEGKATPAQIGSFITALRIKGETIEEITGCAKVM 61 Query: 83 RGFSTHVATERSQLLDTCGTGGSGIHKFNXXXXXXXXXXXXXVRVAKHGNRSASGRAGSA 142 R + + +DTCGTGG G + FN V VAKHGNRS S ++GSA Sbjct: 62 RAKADKICPNVDYYIDTCGTGGDGTNTFNISTATAFVAAAGGVYVAKHGNRSVSSKSGSA 121 Query: 143 DVLEALGVNIHLNAEQARQCLDSIGICFLFAQIYHPSMKHAAAPRKELGFRTVFNMLGPL 202 DVLEALGVNI L+ Q ++C++ +GI F++A ++H SMKHAA PRKELG RT+FN+LGPL Sbjct: 122 DVLEALGVNIDLDPVQVKECIEKVGIGFIYAPVFHKSMKHAAGPRKELGIRTIFNILGPL 181 Query: 203 TNPAGADRQLMGIYDRDKTQTIAHVLKELGSKRAMIVSSLDGLDEISISAPTQVSELKNG 262 TNP+ A Q++G+++ + T+ +A+VL LG +RAM++ +DG+DEI+ + T+VSE++N Sbjct: 182 TNPSNAKGQVLGVFNPNLTELMANVLLNLGIERAMVIHGMDGMDEITTTTSTKVSEVRNN 241 Query: 263 MVTTYEITPQELGLSTHPLENVLGGDAAVNAAIITGVLQGDVNPYRDIVLANAGACIYVA 322 V TYE+ P+ G++ E++ GG+A NA II + G+ P RDIV+ N+ A +YV Sbjct: 242 EVITYELFPENYGIALASPEDLTGGNAEENAQIIRRIFNGEKGPKRDIVVLNSAAALYVG 301 Query: 323 GLADTLQEGVEQAKAVVDSGAALLKLEQLKAMTKEL 358 + +++EG+ A+ V+DSG AL KL++ T Sbjct: 302 KVVSSIEEGIGLAEEVIDSGKALQKLDEFVEFTNSF 337 >gb|EAD41066.1| unknown [environmental sequence] Length = 326 Score = 317 bits (813), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 164/322 (50%), Positives = 210/322 (65%) Query: 23 IQSGIASIIEGRDLSRLQAREIMGSIMEGSASAAQIGSLLTALRIKGETVEEITGFAEAM 82 IQ+ IA IEG+DL+R +M +IM G A+ AQIG L ALRIKGET++EI G AE M Sbjct: 3 IQAAIAQAIEGKDLTRTDMVSVMDAIMSGEAADAQIGGFLVALRIKGETIDEIRGAAEVM 62 Query: 83 RGFSTHVATERSQLLDTCGTGGSGIHKFNXXXXXXXXXXXXXVRVAKHGNRSASGRAGSA 142 R ST + T S ++DTCGTGG FN + VAKHGNRS + ++GSA Sbjct: 63 REKSTKIKTTHSVIVDTCGTGGDHSSTFNISTTAAFVAAGAGLCVAKHGNRSVTSQSGSA 122 Query: 143 DVLEALGVNIHLNAEQARQCLDSIGICFLFAQIYHPSMKHAAAPRKELGFRTVFNMLGPL 202 DVL LGVN + E QCLD +GI FLFA H +MKHA PR+EL RTVFN LGPL Sbjct: 123 DVLAVLGVNTEASPEVVGQCLDDVGIGFLFAVALHGAMKHAIGPRRELATRTVFNALGPL 182 Query: 203 TNPAGADRQLMGIYDRDKTQTIAHVLKELGSKRAMIVSSLDGLDEISISAPTQVSELKNG 262 TNPAGA RQ++G+Y + T+ +A+VL LGS+ A +V DGLDE++ + PT+VSE K Sbjct: 183 TNPAGATRQVVGVYSPNLTEMLANVLSGLGSEHAFVVHGSDGLDEVTTTGPTRVSEFKTD 242 Query: 263 MVTTYEITPQELGLSTHPLENVLGGDAAVNAAIITGVLQGDVNPYRDIVLANAGACIYVA 322 V+TYEI+P + GL T E++ GG+ A NA I+ GVL G+ P RDIVL N+ + Sbjct: 243 SVSTYEISPGDFGLDTAAPEDLKGGEPAENAEILKGVLSGEKGPRRDIVLINSALALVAG 302 Query: 323 GLADTLQEGVEQAKAVVDSGAA 344 G A++L+EGV A +DSGAA Sbjct: 303 GKAESLEEGVALAAKTIDSGAA 324 >ref|NP_247205.1| anthranilate synthase component II (trpD) [Methanococcus jannaschii] sp|Q57686|TRPD_METJA Anthranilate phosphoribosyltransferase pir||C64329 anthranilate synthase (EC 4.1.3.27) subunit II' - Methanococcus jannaschii gb|AAB98221.1| anthranilate synthase component II (trpD) [Methanococcus jannaschii] Length = 336 Score = 310 bits (793), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 158/336 (47%), Positives = 220/336 (65%), Gaps = 3/336 (0%) Query: 23 IQSGIASIIEGRDLSRLQAREIMGSIMEGSASAAQIGSLLTALRIKGETVEEITGFAEAM 82 I + +IE +DL +A +M IM G+A QI ++LTALR+KGET+EEIT FA+ M Sbjct: 2 ITEALKKVIEFKDLDEKEAEAVMKDIMSGNAKPTQIAAILTALRMKGETIEEITAFAKIM 61 Query: 83 RGFSTHVATERSQLLDTCGTGGSGIHKFNXXXXXXXXXXXXXVRVAKHGNRSASGRAGSA 142 R FS + +LLDTCGTGG ++ FN V VAKHGN++ S ++GSA Sbjct: 62 REFSLKINPNVPKLLDTCGTGGDNLNTFNISTATAFVVSAY-VPVAKHGNKAVSSKSGSA 120 Query: 143 DVLEALGVNIHLNAEQARQCLDSIGICFLFAQIYHPSMKHAAAPRKELGFRTVFNMLGPL 202 DVLEALGVN+++ E+ ++ ++ IGI FLFA +HP+MK A RKELG RTVFN+LGPL Sbjct: 121 DVLEALGVNLNVPIERVKESIEKIGIGFLFAPHFHPAMKFATPVRKELGIRTVFNVLGPL 180 Query: 203 TNPAGADRQLMGIYDRDKTQTIAHVLKELGSKRAMIVSSLDGLDEISISAPTQVSELKNG 262 TNPA A+ QLMG+YD T+ +A+VLK LG K A++V G+DEI+ T++SEL+NG Sbjct: 181 TNPANANYQLMGVYDEKLTEKLANVLKNLGLKGALVVHG-SGMDEITTIGKTKISELRNG 239 Query: 263 MVTTYEITPQELGLSTHPLENVLGGDAAVNAAIITGVLQG-DVNPYRDIVLANAGACIYV 321 + +Y I P++ G+ LE++ GGDA NA II + +G +V RDIV+ NA +Y+ Sbjct: 240 EIKSYYIEPEDFGIKKAKLEDIRGGDAEENAKIIGEIFEGEEVGAKRDIVVLNAAFALYI 299 Query: 322 AGLADTLQEGVEQAKAVVDSGAALLKLEQLKAMTKE 357 A A ++EG++ A+ +D G AL KLE L +E Sbjct: 300 AEEAKDVEEGIKLAEKSIDEGKALKKLEDLIEFYRE 335 >ref|ZP_00079752.1| COG0547: Anthranilate phosphoribosyltransferase [Geobacter metallireducens] Length = 350 Score = 300 bits (767), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 160/349 (45%), Positives = 212/349 (60%), Gaps = 14/349 (4%) Query: 23 IQSGIASIIEGRDLSRLQAREIMGSIMEGSASAAQIGSLLTALRIKGETVEEITGFAEAM 82 I+ IA ++E DL+ + E+M IM G A+ AQI S +TALR+KGETVEEITG A M Sbjct: 2 IKKAIAKVVERIDLTEAEMIEVMDQIMSGEATPAQIASFITALRMKGETVEEITGAARVM 61 Query: 83 RGFSTHVATERSQL--------------LDTCGTGGSGIHKFNXXXXXXXXXXXXXVRVA 128 R +T + + L LD GTGG G + FN V+VA Sbjct: 62 RDRATPIRVGKGVLDIDRDDINIDQETILDVVGTGGDGTNTFNISTTVSFVVASCGVKVA 121 Query: 129 KHGNRSASGRAGSADVLEALGVNIHLNAEQARQCLDSIGICFLFAQIYHPSMKHAAAPRK 188 KHGNR+ S GSADVLE+LGV++ + E + IGI FLFA H +MKHA PRK Sbjct: 122 KHGNRAVSSACGSADVLESLGVSLDVTPETVENAIARIGIGFLFAPALHGAMKHAIGPRK 181 Query: 189 ELGFRTVFNMLGPLTNPAGADRQLMGIYDRDKTQTIAHVLKELGSKRAMIVSSLDGLDEI 248 E+G RT+FN+LGPLTNPAGAD Q++G+Y D + +AHVL +LG KR +V +DG+DEI Sbjct: 182 EIGIRTIFNILGPLTNPAGADCQVLGVYREDLVEPLAHVLHKLGCKRGFVVFGMDGMDEI 241 Query: 249 SISAPTQVSELKNGMVTTYEITPQELGLSTHPLENVLGGDAAVNAAIITGVLQGDVNPYR 308 +++ T+V+E+ VT ITP+E G ++ P ++ GGDAA NA I+ +L G P R Sbjct: 242 TLTRETRVAEVTREGVTVRTITPEEFGFASCPPGDLRGGDAAGNARIVRSILDGATGPRR 301 Query: 309 DIVLANAGACIYVAGLADTLQEGVEQAKAVVDSGAALLKLEQLKAMTKE 357 D+VL NA + AG A EG+ A +DSG AL KLE+L A+T E Sbjct: 302 DVVLLNAAYALVAAGKATDPAEGIRLAAEAIDSGRALAKLEELIALTNE 350 >ref|ZP_00043306.1| COG0547: Anthranilate phosphoribosyltransferase [Magnetococcus sp. MC-1] Length = 343 Score = 296 bits (758), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 157/331 (47%), Positives = 214/331 (64%), Gaps = 3/331 (0%) Query: 23 IQSGIASIIEGRDLSRLQAREIMGSIMEGSASAAQIGSLLTALRIKGETVEEITGFAEAM 82 IQ+ +A +++G DLS+ +A E M SIM G + AQIG+ +TALR+KGE++ EI G A+AM Sbjct: 3 IQAALARVVDGHDLSQPEAYEAMLSIMSGRCTDAQIGAFITALRMKGESIAEIAGAAQAM 62 Query: 83 RGFSTHVATERSQLLDTCGTGGSGIHKFNXXXXXXXXXXXXXVRVAKHGNRSASGRAGSA 142 R + H ++DTCGTGG + FN V VAKHGNRS + ++GSA Sbjct: 63 REMA-HKVKASGAVVDTCGTGGDALGTFNISTTVAFVVAACGVTVAKHGNRSITSKSGSA 121 Query: 143 DVLEALGVNIHLNAEQARQCLDSIGICFLFAQIYHPSMKHAAAPRKELGFRTVFNMLGPL 202 DVL+ALGVNI + CL G+ FLFA +H +MKHA PRKEL RT+FN+LGPL Sbjct: 122 DVLKALGVNIEADTAVVETCLQRCGMGFLFAVKHHGAMKHAIGPRKELAIRTIFNLLGPL 181 Query: 203 TNPAGADRQLMGIYDRDKTQTIAHVLKELGSKRAMIVSSLDGLDEISISAPTQVSELK-N 261 TNPA A QL+G++D T+ +A VL LGS RAM+V DGLDEI+I+ TQVSELK + Sbjct: 182 TNPASAPYQLIGVFDGRWTEPMAQVLGRLGSSRAMVVHGNDGLDEITITTTTQVSELKSD 241 Query: 262 GMVTTYEITPQELGLSTHPLENVLGGDAAVNAAIITGVLQG-DVNPYRDIVLANAGACIY 320 G VT Y + PQ+ GL + + GG+A+ NAAI +L G + R +V+ NA A +Y Sbjct: 242 GQVTNYTLDPQDFGLPLANISELKGGEASENAAITRAILSGTEQGAKRHVVVLNAAAALY 301 Query: 321 VAGLADTLQEGVEQAKAVVDSGAALLKLEQL 351 ++G+A ++ G E A+ +DSG AL +L+ L Sbjct: 302 ISGMAQSMTTGKEMAEQALDSGRALKRLQML 332 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.316 0.131 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 459,726,324 Number of extensions: 17385118 Number of successful extensions: 47410 Number of sequences better than 1.0e-05: 688 Number of HSP's gapped: 46816 Number of HSP's successfully gapped: 688 Length of query: 362 Length of database: 757,237,578 Length adjustment: 127 Effective length of query: 235 Effective length of database: 412,420,005 Effective search space: 96918701175 Effective search space used: 96918701175 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 126 (53.1 bits)