BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0256.0028.p (202 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_623179.1| Phosphoribosylanthranilate isomerase [Thermoana... 107 1e-22 ref|NP_720973.1| putative phosphoribosyl anthranilate isomerase ... 105 6e-22 ref|NP_441858.1| 5'-phosphoribosyl anthranilate isomerase [Synec... 104 1e-21 ref|NP_471006.1| phosphoribosyl anthranilate isomerase [Listeria... 102 8e-21 ref|ZP_00178057.1| hypothetical protein Cwat183601 [Crocosphaera... 100 2e-20 >ref|NP_623179.1| Phosphoribosylanthranilate isomerase [Thermoanaerobacter tengcongensis] sp|Q8R9M8|TRPF_THETN N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) gb|AAM24783.1| Phosphoribosylanthranilate isomerase [Thermoanaerobacter tengcongensis] Length = 203 Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 22/199 (11%) Query: 2 DYIGFVFAESRRRVSPGQAAELIAGLAEWENGNPPLAAGVFVNPTLAELAALLSTVPLKV 61 D+IGFVF+ES+RRV +A E + L E GVFVN + ++ + + L V Sbjct: 24 DFIGFVFSESKRRVDLKEALEFVKRLKE-----GIKKVGVFVNEPVEKVMEIAEKLKLDV 78 Query: 62 IQLHGRESAELCRAVKAAFPQVQVWKALSVAKSNAESDADGPHALQQYAGAVDALLLDTY 121 +Q HG E+ E F VWKA+ + +S + G VDA L D++ Sbjct: 79 LQFHGDETQEYI----DNFKNFTVWKAIRI-RSKLDLKKTGEFK-------VDAFLFDSF 126 Query: 122 DPAGSGGSGQTFDWGKIPSYQQAASEYGLPLFVAGGLHPDNVRELLDGYAPYXXXXXXXX 181 G GG+G+ FDW + +Y++ +P+ ++GGL +NV E + PY Sbjct: 127 SEKGYGGTGEAFDWNILKAYKRE-----IPVVLSGGLKEENVEEAIKLVRPYAVDVSSGV 181 Query: 182 XXXXXKDLIKMTAFVERVK 200 KD KM +F+E+V+ Sbjct: 182 EVGGYKDFNKMKSFIEKVR 200 >ref|NP_720973.1| putative phosphoribosyl anthranilate isomerase [Streptococcus mutans UA159] sp|Q8DVF4|TRPF_STRMU N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) gb|AAN58279.1| putative phosphoribosyl anthranilate isomerase [Streptococcus mutans UA159] Length = 193 Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 102/200 (51%), Gaps = 30/200 (15%) Query: 2 DYIGFVFAESRRRVSPGQAAELIAGLAEWENGNPPLAAGVFVNPTLAELAALLSTVPLKV 61 DYIGFVFA+S+R+VS QA +L + E GVFV+PTL EL + TVPL + Sbjct: 24 DYIGFVFAKSKRQVSLEQAQKLAKMIPEKVK-----KVGVFVSPTLEELKIAIKTVPLDL 78 Query: 62 IQLHGRESAELCRAVKAAFPQVQVWKALSVAKSNAESDADGPHALQQYAGAVDALLLDTY 121 +Q+HG +L + F V + +A+ + K G L A D LL D Sbjct: 79 VQVHGDYDEDL----QTDFS-VPLIRAVQIKK--------GKENLTSKA---DYLLFD-- 120 Query: 122 DPAGSGGSGQTFDWGKIPSYQQAASEYGLPLFVAGGLHPDNVRELLDGYAPYXXXXXXXX 181 A GSG+TFDW ++ + Q P F+AGGL DNV+E ++ +APY Sbjct: 121 --APIAGSGETFDWQQLETEQLQK-----PFFIAGGLTSDNVKECIEHFAPYAVDVSSGV 173 Query: 182 XXXXXKDLIKMTAFVERVKQ 201 KD+ K+ F+E VK+ Sbjct: 174 ETNGRKDIEKIKRFIESVKK 193 >ref|NP_441858.1| 5'-phosphoribosyl anthranilate isomerase [Synechocystis sp. PCC 6803] sp|P74435|TRPF_SYNY3 N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) pir||S76407 phosphoribosylanthranilate isomerase (EC 5.3.1.24) - Synechocystis sp. (strain PCC 6803) dbj|BAA18536.1| 5'-phosphoribosyl anthranilate isomerase [Synechocystis sp. PCC 6803] Length = 218 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 88/169 (52%), Gaps = 13/169 (7%) Query: 4 IGFVFAESRRRVSPGQAAELIAGLAEWENGNPPLAAGVFVNPTLAELAALLSTVPLKVIQ 63 +GF+ E+ R + EL+ L N A GVF N +L +L L+ L IQ Sbjct: 27 LGFICVEASSRYVSSREIELV--LQSLTAHNKRSAIGVFANVSLPKLGEFLAQTSLNGIQ 84 Query: 64 LHGRESAELCRAVKAAFPQVQVWKALSVAKSNAESDADGPHALQQYAGAVDALLLDTYDP 123 LHG ES + CR VK AFPQ ++ KAL + +S A+ Y AVD LLLD Y P Sbjct: 85 LHGDESPDFCRQVKQAFPQHRLIKALRLRRSADLERAEA------YYNAVDVLLLDAYHP 138 Query: 124 AGSGGSGQTFDWGKIPSYQQAASEYGLPLFVAGGLHPDNVRELLDGYAP 172 GG+GQT W K+ ++ LP ++AGGL P NV+E L+ P Sbjct: 139 EQLGGTGQTLPWQKLQQFRPP-----LPWWLAGGLTPSNVQEALNLLQP 182 >ref|NP_471006.1| phosphoribosyl anthranilate isomerase [Listeria innocua] sp|Q92B80|TRPF_LISIN N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) pir||AE1641 phosphoribosyl anthranilate isomerase [imported] - Listeria innocua (strain Clip11262) emb|CAC96901.1| phosphoribosyl anthranilate isomerase [Listeria innocua] Length = 203 Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 101/201 (50%), Gaps = 26/201 (12%) Query: 2 DYIGFVFAESRRRVSPGQAAELIAGLAEWENGNPP--LAAGVFVNPTLAELAALLSTVPL 59 D IGFVFA+S+R+V+ QA +L + PP GVFVNPT EL A + VPL Sbjct: 23 DMIGFVFAKSKRQVTIEQAHQLAKNI-------PPNIKKVGVFVNPTEDELTAAIKGVPL 75 Query: 60 KVIQLHGRESAELCRAVKAAFPQVQVWKALSVAKSNAESDADGPHALQQYAGAVDALLLD 119 ++QLHG+E E +A +V KA V + P+ + Y+ A +LLD Sbjct: 76 DIVQLHGQEPTE-----QADRTDAEVIKAFPVKEGKL------PNNINDYSNAY--ILLD 122 Query: 120 TYDPAGSGGSGQTFDWGKIPSYQQAASEYGLPLFVAGGLHPDNVRELLDGYAPYXXXXXX 179 GGSG+TFDW K+ S ++ L +AGGL+ +NV+E ++ + PY Sbjct: 123 APAEEYEGGSGKTFDWDKVNSDLLIKNK----LIIAGGLNVENVKEAINRFEPYAVDISS 178 Query: 180 XXXXXXXKDLIKMTAFVERVK 200 KD K+ F++ K Sbjct: 179 GVETNGEKDPEKIKIFIKTAK 199 >ref|ZP_00178057.1| hypothetical protein Cwat183601 [Crocosphaera watsonii WH 8501] Length = 215 Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 17/170 (10%) Query: 4 IGFVFAE-SRRRVSPGQAAELIAGLAEWENGNPPLAAGVFVNPTLAELAALLSTVPLKVI 62 +GF+ E S R ++ Q E+I + N L GVF NP+L ++ +L L I Sbjct: 25 LGFICVERSPRYINSQQIQEIIRVIPT----NIDLI-GVFANPSLTKIKGVLQVAQLTAI 79 Query: 63 QLHGRESAELCRAVKAAFPQVQVWKALSVAKSNAESDADGPHALQQYAGAVDALLLDTYD 122 QLHG E+ E C VK +P +++ KA + + + + QY A+D LLLD YD Sbjct: 80 QLHGDETPEFCAQVKQLWPHLEIIKAFRIKTVGSLEN------IPQYVEAIDTLLLDAYD 133 Query: 123 PAGSGGSGQTFDWGKIPSYQQAASEYGLPLFVAGGLHPDNVRELLDGYAP 172 P GG+G+T +W + +++ P F+AGGL+P+N+ + LD AP Sbjct: 134 PQQLGGTGKTLNWDILATFKPDR-----PWFLAGGLNPNNILQALDNLAP 178 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.316 0.134 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 277,244,198 Number of extensions: 10541212 Number of successful extensions: 25725 Number of sequences better than 1.0e-05: 266 Number of HSP's gapped: 25499 Number of HSP's successfully gapped: 266 Length of query: 202 Length of database: 757,237,578 Length adjustment: 120 Effective length of query: 82 Effective length of database: 431,425,698 Effective search space: 35376907236 Effective search space used: 35376907236 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 123 (52.0 bits)