BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0239.0004.p (416 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAI60553.1| unknown [environmental sequence] 158 2e-37 gb|EAJ18137.1| unknown [environmental sequence] 158 2e-37 gb|EAC28777.1| unknown [environmental sequence] 146 1e-33 gb|EAH33235.1| unknown [environmental sequence] 145 1e-33 gb|EAJ41061.1| unknown [environmental sequence] 142 1e-32 >gb|EAI60553.1| unknown [environmental sequence] Length = 367 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 99/327 (30%), Positives = 154/327 (47%), Gaps = 26/327 (7%) Query: 106 HKAEISGLTPGTLYAYRVGSGAEEEWSPVAEFRTAEADSSSVTFINVTDSQGVTPADFRL 165 H + L P T YAYRVG G + WS +F TA + +F+ V D+Q + L Sbjct: 36 HSVTFTDLEPNTTYAYRVGDG--KHWSEWIQFTTAYKTNEPFSFLYVGDAQNYI---YDL 90 Query: 166 WGKTVDKAFQTFPDAQFIMHNGDFTEEPEDSAAWDSLWGNVQSLVASVPLMPVTGNHD-- 223 W + + + ++ P+A FI+H GD ++ + W + + ++P + V GNH+ Sbjct: 91 WSRLIREGYKKAPEASFILHAGDLVDDAHNEEEWHEWFAAGGWIHRTLPSLAVPGNHEYR 150 Query: 224 ---------EAGGVAAGFTSHFNLPGNGAKGSIPGTSYSFDVGPVHMTVLNTESNLKKQA 274 ++ + F LP NG G + T+Y D V LN+ +++Q Sbjct: 151 PLYQKDIPIRKKTLSIQWNHQFTLPNNGVSGLLE-TNYFLDYQGVRFIALNSNVKIEEQT 209 Query: 275 EWLKQDLAGTDKPWKIIAMHRPAYGGNIYRKVGE----WTAIFDKYQVDLVLQGHNHEYS 330 EWL+ L W I H P Y R E W +FDKY VDL LQGH+H Y+ Sbjct: 210 EWLETVLKNNPHKWTIAFFHHPLYSATTKRDYPERRKRWKPLFDKYGVDLALQGHDHAYA 269 Query: 331 R-SYPLYQGAIVSEAKTSAAARRGTVYVVTNASGAKFNGKKADQFYHKVHFQ--NNKQMF 387 R S LY+ +++ A GTVYVV+ + ++ K Y ++ NKQ+F Sbjct: 270 RGSESLYEKNLITGTNVKDAT--GTVYVVSVSGPKHYDAKPDWDQYEPTRYKAGENKQLF 327 Query: 388 AGITVSGSKLTFQAYDVDGSKLDEFVL 414 I++ G+KL++++Y G D F L Sbjct: 328 QVISIDGNKLSYKSYTAIGDLFDSFEL 354 >gb|EAJ18137.1| unknown [environmental sequence] Length = 403 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 102/327 (31%), Positives = 157/327 (48%), Gaps = 26/327 (7%) Query: 106 HKAEISGLTPGTLYAYRVGSGAEEEWSPVAEFRTAEADSSSVTFINVTDSQGVTPADFRL 165 H +GL P T YAYRVG G E WS +F TA + +F+ V D+Q + L Sbjct: 72 HSVTFTGLKPNTTYAYRVGDG--ERWSEWIQFTTAHKTNEPFSFLFVGDAQNYI---YDL 126 Query: 166 WGKTVDKAFQTFPDAQFIMHNGDFTEEPEDSAAWDSLWGNVQSLVASVPLMPVTGNHD-- 223 W + + ++++ P+A FI+H GD ++ + W + + ++P + V GNH+ Sbjct: 127 WSRLIRESYKKAPEASFILHAGDLIDDAHNEEEWHEWFAAGGWIHRTLPSLAVPGNHEYR 186 Query: 224 ---------EAGGVAAGFTSHFNLPGNGAKGSIPGTSYSFDVGPVHMTVLNTESNLKKQA 274 ++ + F LP NG + T+Y D V LN+ + +Q Sbjct: 187 PLYQKDIPIRKKTLSIQWNHQFTLPNNGI-SELLETNYFLDYQGVRFIALNSNVMIDEQM 245 Query: 275 EWLKQDLAGTDKPWKIIAMHRPAYGGNIYRKVGE----WTAIFDKYQVDLVLQGHNHEYS 330 EWL+ L W I H P Y R E W +FDKY VDL LQGH+H Y+ Sbjct: 246 EWLETVLKNNPHKWTIAFFHHPLYSATTKRDYPERRKRWKPLFDKYGVDLALQGHDHTYA 305 Query: 331 R-SYPLYQGAIVSEAKTSAAARRGTVYVVTNASGAKFNGKKA-DQFYHKVHFQN-NKQMF 387 R S LY+ +++ A GTVYVV+ + +++ K + DQ+ H NKQ+F Sbjct: 306 RGSESLYEKNLLTGTNIKDAT--GTVYVVSVSGPKQYDIKPSWDQYEATRHKAGANKQLF 363 Query: 388 AGITVSGSKLTFQAYDVDGSKLDEFVL 414 I++ G+KL++++Y G D F L Sbjct: 364 QVISIDGNKLSYRSYTAIGDLFDSFDL 390 >gb|EAC28777.1| unknown [environmental sequence] Length = 285 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 82/240 (34%), Positives = 125/240 (52%), Gaps = 22/240 (9%) Query: 107 KAEISGLTPGTLYAYRVGSGA-EEEWSPVAEFRTAEADSSSVTFINVTDSQGVTPADFRL 165 + +I GL P TLYAYRVG+ + EW +F TA S ++F+ V D+Q L Sbjct: 52 EVKIEGLKPNTLYAYRVGNNKFKSEWH---QFTTANDKESPISFLYVGDAQNYI---LDL 105 Query: 166 WGKTVDKAFQTFPDAQFIMHNGDFTEEPEDSAAWDSLWGNVQSLVASVPLMPVTGNHD-- 223 W + + KA++ PDA F +H GD ++ + W+ + + + +P + V GNH+ Sbjct: 106 WSRVIRKAYKVSPDADFFIHAGDLVDKAHSESEWNEWFAAGSFIHSEIPAIAVPGNHEYQ 165 Query: 224 --EAGGVAAG------FTSHFNLPGNGAKGSIPGTSYSFDVGPVHMTVLNTESNLKKQAE 275 ++G G + F+LP NG K S+ T Y D + + LN+ +K QA+ Sbjct: 166 RTDSGQQGLGRVLSLQWRPQFSLPKNGPK-SLEETCYYLDYPNLRIIALNSNVKIKLQAK 224 Query: 276 WLKQDLAGTDKPWKIIAMHRPAYGGNIYRKVGE----WTAIFDKYQVDLVLQGHNHEYSR 331 WL+ LA DK W ++ H P + + R E W +FD+YQVDL LQGH+H Y+R Sbjct: 225 WLRNILAENDKKWTVVTYHHPIFSASTGRDNSELRKHWKPLFDEYQVDLALQGHDHTYAR 284 >gb|EAH33235.1| unknown [environmental sequence] Length = 335 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 106/329 (32%), Positives = 151/329 (45%), Gaps = 30/329 (9%) Query: 106 HKAEISGLTPGTLYAYRVGSGAEEEWSPVAEFRTAEADSSSVTFINVTDSQGVTPADFRL 165 H L P T+Y YRVG G + WS +FRTA A+ + FI D+Q + Sbjct: 11 HSVIFDQLQPDTVYVYRVGDG-DARWSEWIQFRTARAEYAPTQFIYFGDAQNDILSH--- 66 Query: 166 WGKTVDKAFQTFPDAQFIMHNGDFTEEPEDSAAWDSLWGNVQSLVASVPLMPVTGNHD-- 223 W + + +A QT P+A F++H GD + W + L + +PV GNH+ Sbjct: 67 WSRVIRRAHQTAPNASFVVHAGDLINQAHRDYEWAQWFKAGGFLHSQCTAIPVVGNHEFT 126 Query: 224 EAGG------VAAGFTSHFNLP-GNGAKGSIPGTSYSFDVGPVHMTVLNTESNLKKQAEW 276 GG +A + F+LP + T Y+ D + + VLN+ +L+ Q+E+ Sbjct: 127 SLGGKKSPRRLAIQWRPQFSLPVETELSPQLHETVYTIDYQDIRIIVLNSNDDLEAQSEY 186 Query: 277 LKQDLAGTDKPWKIIAMHR----PAYGGNIYRKVGEWTAIFDKYQVDLVLQGHNHEYSRS 332 LK+ L T WKI+ H PA G N W + DKY VDLVL GH+H Y+R Sbjct: 187 LKKQLENTTAKWKIVTCHHSVFSPAKGRNFQFARDHWKPLLDKYGVDLVLNGHDHTYARG 246 Query: 333 YPLYQGAIVSEAKTSAAARRGTVYVVTNASGAKFNGKKADQF-------YHKVHFQNNKQ 385 + V A SA+ GTVY VT+ SG K +Q Y + Q Sbjct: 247 H-----VPVRTADGSASNDLGTVY-VTSVSGPKQYRIDDEQMRGYAVDGYSRDKKGEQTQ 300 Query: 386 MFAGITVSGSKLTFQAYDVDGSKLDEFVL 414 + I+V G LT+ AY V G + D V+ Sbjct: 301 FYQVISVEGETLTYVAYTVLGDEYDRAVI 329 >gb|EAJ41061.1| unknown [environmental sequence] Length = 410 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 115/404 (28%), Positives = 177/404 (43%), Gaps = 46/404 (11%) Query: 41 PYDLVTTFKGDVSTSRAFTWYT--GDPGTAGWLEVXXXXXXXXXXXTLLKVQADNTVIQT 98 P ++ F GD ST RA TW T + V K + + + Sbjct: 11 PDRIILNFNGDPSTKRAVTWRTDLSVKNAKAQIAVAGVNSKFAKNAKTYKAKTE----EF 66 Query: 99 DLGQKGV--------HKAEISGLTPGTLYAYRVGSGAEEEWSPVAEFRTAEADSSSVTFI 150 DLG H L P T YAYRVG G + WS +F+TA AD +S F+ Sbjct: 67 DLGLYKANNSFVVKYHSVVFEELNPNTTYAYRVGDG--DNWSEWIQFKTANADYNSTQFV 124 Query: 151 NVTDSQGVTPADFRLWGKTVDKAFQTFPDAQFIMHNGDFTEEPEDSAAWDSLWGNVQSLV 210 D+Q + W + + A+QT P+A F++H GD + W + + Sbjct: 125 YFGDAQNDILSH---WSRVIRMAYQTAPNASFVIHAGDMVDTAHRDYEWAQWFKAGGFIH 181 Query: 211 ASVPLMPVTGNHD-------EAGGVAAGFTSHFNLP-GNGAKGSIPGTSYSFDVGPVHMT 262 +PV GNH+ V+ + F LP G + T Y+ + V + Sbjct: 182 RQWTTIPVVGNHEFQSTSRSTPKRVSIQWRPQFTLPVEEGLDSKLHETVYTVNYQDVLIL 241 Query: 263 VLNTESNLKKQAEWLKQDLAGTDKPWKIIAMHR----PAYGGNIYRKVGEWTAIFDKYQV 318 VLN+ L+KQ E++++ L+ +D WKI+ H PA G + W +FDKY V Sbjct: 242 VLNSTDFLEKQTEYIQEILSNSDAKWKIVTCHHSVFSPAQGRDFEYARKNWKPLFDKYGV 301 Query: 319 DLVLQGHNHEYSRSYPLYQGAI-VSEAKTSAAARRGTVYVVTNASGAKFNGKKADQF--Y 375 DLVL GH+H Y+R G I + + ++ T+Y +T+ SG K +Q Y Sbjct: 302 DLVLNGHDHTYAR------GHIPIKTTDNNKSSNFNTLY-ITSVSGPKQYKIGLEQIKNY 354 Query: 376 HKVHFQNNK-----QMFAGITVSGSKLTFQAYDVDGSKLDEFVL 414 ++N+K Q F I+++ LT++AY V G + D ++ Sbjct: 355 QSDGYKNDKLGEQTQFFQVISINEETLTYKAYTVLGDEYDTAII 398 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.316 0.132 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 628,714,902 Number of extensions: 26215810 Number of successful extensions: 63477 Number of sequences better than 1.0e-05: 201 Number of HSP's gapped: 63180 Number of HSP's successfully gapped: 206 Length of query: 416 Length of database: 757,237,578 Length adjustment: 128 Effective length of query: 288 Effective length of database: 409,704,906 Effective search space: 117995012928 Effective search space used: 117995012928 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 127 (53.5 bits)