BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0236.0023.p (181 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_845092.1| conserved hypothetical protein [Bacillus anthra... 136 3e-31 gb|AAS69259.1| conserved hypothetical protein [Leptospira interr... 135 6e-31 ref|NP_832499.1| hypothetical Cytosolic Protein [Bacillus cereus... 132 4e-30 ref|NP_979079.1| conserved hypothetical protein [Bacillus cereus... 132 4e-30 gb|EAG83892.1| unknown [environmental sequence] 125 5e-28 >ref|NP_845092.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gb|AAP26578.1| conserved hypothetical protein [Bacillus anthracis str. Ames] Length = 178 Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 79/177 (44%), Positives = 106/177 (59%), Gaps = 3/177 (1%) Query: 1 MNTYIALLRGINVGGNKIIKMQALKAMFESLGYSRVRTYIQSGNVVFESNEAQAAELEAV 60 M YIALLRGINVGG+KIIKM LK FES+G +V+TYIQSGN+VF+S E L+ Sbjct: 1 MTIYIALLRGINVGGHKIIKMADLKQAFESIGLKQVKTYIQSGNIVFKS-EEDITFLKER 59 Query: 61 ISAAIKETFGFDVSVMIRTLEELEAAIAGNPFEPPAEEGYKRLYISFLAEAPSKEALEKL 120 I + IK FGFDV VM+RT E I P+E + + ++I+FLA SK+ ++L Sbjct: 60 IQSEIKNVFGFDVPVMLRTYAEFTNIIKICPYEADSLLEGESMHIAFLANELSKKEKDQL 119 Query: 121 RPYEEGADKLHVAGKEMYTLYEVSASQSPLFKVQLDKLLGTSITARNWNTVNKLAAM 177 Y+ + ++ K +Y ++ S S L Q K + T T RNW TVNKL A+ Sbjct: 120 LIYKNMNEDCYIHEKVVYLFFKTSIRNSKLMN-QFQK-IHTPATVRNWRTVNKLKAI 174 >gb|AAS69259.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 175 Score = 135 bits (339), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 78/177 (44%), Positives = 102/177 (57%), Gaps = 3/177 (1%) Query: 1 MNTYIALLRGINVGGNKIIKMQALKAMFESLGYSRVRTYIQSGNVVFESNEAQAAELEAV 60 M TYIALLRGINV G K I M+ L ++FESLG+ V+TYIQSGNV+F+ EL + Sbjct: 1 MKTYIALLRGINVSGQKKILMKDLSSLFESLGFMNVQTYIQSGNVLFQDKNKNVKELIIL 60 Query: 61 ISAAIKETFGFDVSVMIRTLEELEAAIAGNPFEPPAEEGYKRLYISFLAEAPSKEALEKL 120 I I E FGF+V V IR+ EEL+ I NPF ++ R+YISFL E+ L ++ Sbjct: 61 IEKKIVEVFGFEVIVFIRSKEELKTIIQSNPF---FKKDLNRIYISFLNESKKNPDLTEI 117 Query: 121 RPYEEGADKLHVAGKEMYTLYEVSASQSPLFKVQLDKLLGTSITARNWNTVNKLAAM 177 + ++L V GKE+Y S L L+K L S T RNW TV L+ + Sbjct: 118 EKVKIKGEELIVQGKEIYFFSPKGYGVSKLSNNFLEKKLHVSATTRNWKTVVTLSEL 174 >ref|NP_832499.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579] gb|AAP09700.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579] Length = 178 Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 78/177 (44%), Positives = 107/177 (60%), Gaps = 3/177 (1%) Query: 1 MNTYIALLRGINVGGNKIIKMQALKAMFESLGYSRVRTYIQSGNVVFESNEAQAAELEAV 60 M YIALLRGINVGG+K+IKM LK +FES+G +V+TYIQSGN+VFES E L+ Sbjct: 1 MTFYIALLRGINVGGHKVIKMADLKRVFESIGLKQVKTYIQSGNIVFESEEG-INFLKDQ 59 Query: 61 ISAAIKETFGFDVSVMIRTLEELEAAIAGNPFEPPAEEGYKRLYISFLAEAPSKEALEKL 120 I + IK+ F FDV VM+RT +E I P+E + + ++I+FLA S+E +L Sbjct: 60 IQSEIKKEFDFDVPVMLRTHDEFINIIKQCPYEVHSLLEGESVHIAFLANVLSEEESSQL 119 Query: 121 RPYEEGADKLHVAGKEMYTLYEVSASQSPLFKVQLDKLLGTSITARNWNTVNKLAAM 177 ++ + ++ K +Y ++ S S L Q K L T T RNW TVNKL A+ Sbjct: 120 LTFKSELEDCYIDEKVVYLFFKNSIRNSKLMN-QFQK-LHTPATVRNWRTVNKLKAI 174 >ref|NP_979079.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] gb|AAS41687.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] Length = 178 Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 78/177 (44%), Positives = 103/177 (58%), Gaps = 3/177 (1%) Query: 1 MNTYIALLRGINVGGNKIIKMQALKAMFESLGYSRVRTYIQSGNVVFESNEAQAAELEAV 60 M YIALLRGINVGG+KIIKM LK FES+G +V+TYIQSGN+VFES E L Sbjct: 1 MTIYIALLRGINVGGHKIIKMADLKQTFESIGLKQVKTYIQSGNIVFES-ERDIDFLNKR 59 Query: 61 ISAAIKETFGFDVSVMIRTLEELEAAIAGNPFEPPAEEGYKRLYISFLAEAPSKEALEKL 120 I + IK FGFDV VM+RT EE I P+E + + ++++FLA S+ ++L Sbjct: 60 IQSEIKNVFGFDVPVMLRTHEEFINVIKRCPYEVNSLREGESIHVAFLANELSELEKDQL 119 Query: 121 RPYEEGADKLHVAGKEMYTLYEVSASQSPLFKVQLDKLLGTSITARNWNTVNKLAAM 177 + + ++ K +Y ++ S S L Q K L T T RNW TVNKL + Sbjct: 120 LMQKNETEDCYIHEKVVYLFFKNSIRNSKLMN-QFQK-LHTPATVRNWRTVNKLKVI 174 >gb|EAG83892.1| unknown [environmental sequence] Length = 177 Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 63/174 (36%), Positives = 101/174 (58%) Query: 4 YIALLRGINVGGNKIIKMQALKAMFESLGYSRVRTYIQSGNVVFESNEAQAAELEAVISA 63 ++ALLRGINV G+ +IKM LK + +++G+ + TYIQSGNV E+ E + I Sbjct: 3 HLALLRGINVSGHNMIKMDTLKNILQNIGFKNIETYIQSGNVFLETEEENPNSVGFGIKQ 62 Query: 64 AIKETFGFDVSVMIRTLEELEAAIAGNPFEPPAEEGYKRLYISFLAEAPSKEALEKLRPY 123 I + GFDV V++ + +LE + NPF K+LY++F+++ + AL L+ Sbjct: 63 EIFKQLGFDVPVIVISKSDLEKCLINNPFFKEKNIDTKKLYVAFISKELNNNALNDLKIS 122 Query: 124 EEGADKLHVAGKEMYTLYEVSASQSPLFKVQLDKLLGTSITARNWNTVNKLAAM 177 + D+ + G +Y E A+++ L + ++K L + T+RNWNTVNKL M Sbjct: 123 QFKPDEAFIDGNRVYMKLETGAAKTKLTQKYIEKKLNVTATSRNWNTVNKLLEM 176 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.315 0.131 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 235,260,135 Number of extensions: 8651934 Number of successful extensions: 18844 Number of sequences better than 1.0e-05: 35 Number of HSP's gapped: 18811 Number of HSP's successfully gapped: 35 Length of query: 181 Length of database: 757,237,578 Length adjustment: 118 Effective length of query: 63 Effective length of database: 436,855,896 Effective search space: 27521921448 Effective search space used: 27521921448 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 122 (51.6 bits)