BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0231.0051.p (192 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_834459.1| Phosphatidylglycerophosphatase B [Bacillus cere... 123 2e-27 ref|NP_981199.1| PAP2 family protein [Bacillus cereus ATCC 10987... 122 6e-27 ref|NP_847205.1| PAP2 family protein [Bacillus anthracis str. Am... 120 2e-26 ref|NP_624036.1| Membrane-associated phospholipid phosphatase [T... 118 6e-26 ref|ZP_00180406.1| hypothetical protein Mther166001 [Moorella th... 109 3e-23 >ref|NP_834459.1| Phosphatidylglycerophosphatase B [Bacillus cereus ATCC 14579] gb|AAP11660.1| Phosphatidylglycerophosphatase B [Bacillus cereus ATCC 14579] Length = 177 Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/148 (48%), Positives = 92/148 (62%) Query: 25 LHLLERRLFKWINGRLHNPFLNFWLFYLTHLGGATSAIGINLLIWALSPQPLRTVGLQAL 84 L+ +E +FK IN LN + +TH+GGAT +I + L + L + Sbjct: 6 LYKIECYIFKGINRYFDQKTLNIFFSNITHIGGATFSIALTLFFLIFAKGTLHQAAIATA 65 Query: 85 IALAISHLPVAIAKKLYPRVRPYLALPGTNTFHNPLKDHSFPSGHTTAIFASTVPYMVAF 144 I+LAISH+PV I K+ YPR RPYL + +PLKDHSFPSGHTTA+F+ +P++ Sbjct: 66 ISLAISHIPVQILKRWYPRKRPYLTIQDAKYPVHPLKDHSFPSGHTTAVFSVFIPFICYN 125 Query: 145 PVLTAILLPLACIVGFSRIYLGLHYPSD 172 P L A LLPLA VG SRIYLGLHYPSD Sbjct: 126 PSLLAFLLPLALCVGISRIYLGLHYPSD 153 >ref|NP_981199.1| PAP2 family protein [Bacillus cereus ATCC 10987] gb|AAS43807.1| PAP2 family protein [Bacillus cereus ATCC 10987] Length = 177 Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 70/148 (47%), Positives = 91/148 (61%) Query: 25 LHLLERRLFKWINGRLHNPFLNFWLFYLTHLGGATSAIGINLLIWALSPQPLRTVGLQAL 84 L+ +E +FK IN LN + +TH+GGAT +I + L + L + Sbjct: 6 LYKIECYIFKGINRYFDQKTLNVFFSNITHIGGATFSIALTLFFLIFADGTLHQAAIATA 65 Query: 85 IALAISHLPVAIAKKLYPRVRPYLALPGTNTFHNPLKDHSFPSGHTTAIFASTVPYMVAF 144 I+LAISH+PV I K+ YPR RPYL + +PL+DHSFPSGHTTA+F+ +P++ Sbjct: 66 ISLAISHVPVQILKRWYPRKRPYLTIQDAKYPVHPLQDHSFPSGHTTAVFSVFIPFICYD 125 Query: 145 PVLTAILLPLACIVGFSRIYLGLHYPSD 172 P L LLPLA VG SRIYLGLHYPSD Sbjct: 126 PSLLIFLLPLALCVGISRIYLGLHYPSD 153 >ref|NP_847205.1| PAP2 family protein [Bacillus anthracis str. Ames] gb|AAP28691.1| PAP2 family protein [Bacillus anthracis str. Ames] Length = 177 Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/148 (46%), Positives = 91/148 (61%) Query: 25 LHLLERRLFKWINGRLHNPFLNFWLFYLTHLGGATSAIGINLLIWALSPQPLRTVGLQAL 84 L+ +E +F+ IN LN + +TH+GGAT +I + L + L + Sbjct: 6 LYKIECYIFRGINRYFDQKTLNLFFSNITHIGGATFSIALTLFFLIFASGTLHQAAIATA 65 Query: 85 IALAISHLPVAIAKKLYPRVRPYLALPGTNTFHNPLKDHSFPSGHTTAIFASTVPYMVAF 144 I+LAISH+PV I K+ YPR RPYL + +PL+DHSFPSGHTTA+F+ +P++ Sbjct: 66 ISLAISHIPVQILKRWYPRKRPYLTIQDAKYPVHPLQDHSFPSGHTTAVFSVFIPFICYN 125 Query: 145 PVLTAILLPLACIVGFSRIYLGLHYPSD 172 P L LLPLA VG SRIYLGLHYPSD Sbjct: 126 PNLLIFLLPLALCVGISRIYLGLHYPSD 153 >ref|NP_624036.1| Membrane-associated phospholipid phosphatase [Thermoanaerobacter tengcongensis] gb|AAM25640.1| Membrane-associated phospholipid phosphatase [Thermoanaerobacter tengcongensis] Length = 178 Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 86/144 (59%) Query: 29 ERRLFKWINGRLHNPFLNFWLFYLTHLGGATSAIGINLLIWALSPQPLRTVGLQALIALA 88 +R +F +IN R+ L+ + +TH GG + + + + ++T ++AL +L Sbjct: 11 DRNIFFYINERIKCSLLDKIMPKITHAGGPVFTVFVTVFLALFGKNNVKTSAIEALFSLI 70 Query: 89 ISHLPVAIAKKLYPRVRPYLALPGTNTFHNPLKDHSFPSGHTTAIFASTVPYMVAFPVLT 148 SHL V + K+ Y R RPY+ L NTF LKD+SFPSGH TA F+ + + + FP L Sbjct: 71 SSHLFVQLLKRKYTRPRPYMVLANANTFRQLLKDYSFPSGHATASFSLAMTFSIFFPNLA 130 Query: 149 AILLPLACIVGFSRIYLGLHYPSD 172 I + LA +VG SRIY+GLHYPSD Sbjct: 131 IIFVSLAVLVGLSRIYMGLHYPSD 154 >ref|ZP_00180406.1| hypothetical protein Mther166001 [Moorella thermoacetica ATCC 39073] Length = 168 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 83/144 (57%) Query: 29 ERRLFKWINGRLHNPFLNFWLFYLTHLGGATSAIGINLLIWALSPQPLRTVGLQALIALA 88 + LF ++N RL FL+ + + T LG A A+ +L L + R G QA AL Sbjct: 5 DYYLFYYVNQRLQCSFLDRVMPFFTILGSAAFALFFSLATAILGREQARAAGWQAFFALT 64 Query: 89 ISHLPVAIAKKLYPRVRPYLALPGTNTFHNPLKDHSFPSGHTTAIFASTVPYMVAFPVLT 148 SHL V + K R RPYLALPG P +D+SFPSGHT A F+ + + + FP LT Sbjct: 65 GSHLMVRLFKNWVGRCRPYLALPGARYLARPWQDYSFPSGHTAASFSLAIIFALNFPALT 124 Query: 149 AILLPLACIVGFSRIYLGLHYPSD 172 L+ LA + G SR+Y+G+HYP+D Sbjct: 125 LPLVALAGLTGISRMYVGMHYPTD 148 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.329 0.143 0.461 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 265,027,753 Number of extensions: 10333706 Number of successful extensions: 29344 Number of sequences better than 1.0e-05: 59 Number of HSP's gapped: 29407 Number of HSP's successfully gapped: 59 Length of query: 192 Length of database: 757,237,578 Length adjustment: 119 Effective length of query: 73 Effective length of database: 434,140,797 Effective search space: 31692278181 Effective search space used: 31692278181 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 122 (51.6 bits)